RNA–Protein interactions for RNA: ENST00000561305.1

CASC4-211, Transcript of cancer susceptibility 4, humanhuman

TSL 5

Gene CASC4, Length 353 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-211ENST00000561305 AEBP2Q6ZN18 517 aaPredicted RBP25.04■■□□□ 1.6
CASC4-211ENST00000561305 CHIC1Q5VXU3 224 aa24.08■■□□□ 1.45
CASC4-211ENST00000561305 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
CASC4-211ENST00000561305 PHF23Q9BUL5 403 aaPredicted RBP21.14■□□□□ 0.97
CASC4-211ENST00000561305 FOXD1Q16676 465 aa19.82■□□□□ 0.76
CASC4-211ENST00000561305 PLPPR3Q6T4P5 718 aa19.37■□□□□ 0.69
CASC4-211ENST00000561305 PPP6R1Q9UPN7 881 aa18.77■□□□□ 0.6
CASC4-211ENST00000561305 ADRA2BP18089 450 aa18.71■□□□□ 0.59
CASC4-211ENST00000561305 PIAS4Q8N2W9 510 aaPredicted RBP18.56■□□□□ 0.56
CASC4-211ENST00000561305 MSH5O43196 834 aa18.42■□□□□ 0.54
CASC4-211ENST00000561305 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
CASC4-211ENST00000561305 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
CASC4-211ENST00000561305 MAPK8IP2Q13387 824 aaPredicted RBP17.1■□□□□ 0.33
CASC4-211ENST00000561305 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
CASC4-211ENST00000561305 DMRT2Q9Y5R5 561 aa16.95■□□□□ 0.3
CASC4-211ENST00000561305 CNKSR2Q8WXI2 1034 aa16.63■□□□□ 0.25
CASC4-211ENST00000561305 HOXD11P31277 338 aaPredicted RBP16.47■□□□□ 0.23
CASC4-211ENST00000561305 NCBP3Q53F19 620 aaKnown RBP16.45■□□□□ 0.22
CASC4-211ENST00000561305 RNF216Q9NWF9 866 aaPredicted RBP16.41■□□□□ 0.22
CASC4-211ENST00000561305 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
CASC4-211ENST00000561305 DCAF8L1A6NGE4 600 aa16.16■□□□□ 0.18
CASC4-211ENST00000561305 KCNA4P22459 653 aa16.16■□□□□ 0.18
CASC4-211ENST00000561305 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
CASC4-211ENST00000561305 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
CASC4-211ENST00000561305 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
CASC4-211ENST00000561305 CACNB1Q02641 598 aaPredicted RBP15.6■□□□□ 0.09
CASC4-211ENST00000561305 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
CASC4-211ENST00000561305 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
CASC4-211ENST00000561305 U3KPZ7 1027 aaPredicted RBP15.37■□□□□ 0.05
CASC4-211ENST00000561305 SLC4A1APQ9BWU0 796 aaKnown RBP15.31■□□□□ 0.04
CASC4-211ENST00000561305 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.03■□□□□ -0
CASC4-211ENST00000561305 HNRNPUL2Q1KMD3 747 aaKnown RBP15.03■□□□□ -0
CASC4-211ENST00000561305 SPINK5Q9NQ38 1064 aaPredicted RBP15.03■□□□□ -0
CASC4-211ENST00000561305 MYCNP04198 464 aaPredicted RBP14.99□□□□□ -0.01
CASC4-211ENST00000561305 FOXD4L1Q9NU39 408 aa14.99□□□□□ -0.01
CASC4-211ENST00000561305 CAPN15O75808 1086 aa14.97□□□□□ -0.01
CASC4-211ENST00000561305 APLP2Q06481 763 aa14.96□□□□□ -0.01
CASC4-211ENST00000561305 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
CASC4-211ENST00000561305 ZBTB22O15209 634 aa14.87□□□□□ -0.03
CASC4-211ENST00000561305 DSG3P32926 999 aa14.86□□□□□ -0.03
CASC4-211ENST00000561305 ZNF219Q9P2Y4 722 aaPredicted RBP14.82□□□□□ -0.04
CASC4-211ENST00000561305 TRHP20396 242 aaPredicted RBP14.81□□□□□ -0.04
CASC4-211ENST00000561305 ABCB7O75027 752 aa14.65□□□□□ -0.06
CASC4-211ENST00000561305 ATF5Q9Y2D1 282 aaPredicted RBP14.61□□□□□ -0.07
CASC4-211ENST00000561305 ATXN8OSP0DMR3 200 aa14.54□□□□□ -0.08
CASC4-211ENST00000561305 POLA2Q14181 598 aa14.49□□□□□ -0.09
CASC4-211ENST00000561305 CSRNP3Q8WYN3 585 aa14.48□□□□□ -0.09
CASC4-211ENST00000561305 EHMT2Q96KQ7 1210 aa14.38□□□□□ -0.11
CASC4-211ENST00000561305 ZBTB12Q9Y330 459 aaPredicted RBP14.24□□□□□ -0.13
CASC4-211ENST00000561305 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
CASC4-211ENST00000561305 FBLN2P98095 1184 aa14.01□□□□□ -0.17
CASC4-211ENST00000561305 OSCARQ8IYS5 282 aa14.01□□□□□ -0.17
CASC4-211ENST00000561305 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
CASC4-211ENST00000561305 AKT1S1Q96B36 256 aa13.92□□□□□ -0.18
CASC4-211ENST00000561305 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
CASC4-211ENST00000561305 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
CASC4-211ENST00000561305 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
CASC4-211ENST00000561305 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
CASC4-211ENST00000561305 POTEHQ6S545 545 aa13.74□□□□□ -0.21
CASC4-211ENST00000561305 CHRDL2Q6WN34 429 aa13.71□□□□□ -0.21
CASC4-211ENST00000561305 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
CASC4-211ENST00000561305 ZNF692Q9BU19 519 aaPredicted RBP13.69□□□□□ -0.22
CASC4-211ENST00000561305 PITPNM1O00562 1244 aa13.61□□□□□ -0.23
CASC4-211ENST00000561305 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
CASC4-211ENST00000561305 PABPN1Q86U42 306 aaKnown RBP eCLIP13.5□□□□□ -0.25
CASC4-211ENST00000561305 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
CASC4-211ENST00000561305 PIP4P2Q8N4L2 257 aa13.47□□□□□ -0.25
CASC4-211ENST00000561305 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
CASC4-211ENST00000561305 CLEC11AQ9Y240 323 aa13.43□□□□□ -0.26
CASC4-211ENST00000561305 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
CASC4-211ENST00000561305 PRKAR2AP13861 404 aaKnown RBP13.26□□□□□ -0.29
CASC4-211ENST00000561305 PROM2Q8N271 834 aa13.23□□□□□ -0.29
CASC4-211ENST00000561305 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
CASC4-211ENST00000561305 CHADLQ6NUI6 762 aa13.16□□□□□ -0.3
CASC4-211ENST00000561305 HAX1O00165 279 aa13.11□□□□□ -0.31
CASC4-211ENST00000561305 FKBP8Q14318 412 aa13.07□□□□□ -0.32
CASC4-211ENST00000561305 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
CASC4-211ENST00000561305 SP7Q8TDD2 431 aaPredicted RBP13.03□□□□□ -0.32
CASC4-211ENST00000561305 C19orf67A6NJJ6 358 aa13.02□□□□□ -0.33
CASC4-211ENST00000561305 FARP1Q9Y4F1 1045 aaPredicted RBP13.02□□□□□ -0.33
CASC4-211ENST00000561305 EVX2Q03828 476 aa13□□□□□ -0.33
CASC4-211ENST00000561305 MNX1P50219 401 aaPredicted RBP12.88□□□□□ -0.35
CASC4-211ENST00000561305 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
CASC4-211ENST00000561305 NPM1P06748 294 aaKnown RBP eCLIP12.8□□□□□ -0.36
CASC4-211ENST00000561305 MIER1Q8N108 512 aa12.77□□□□□ -0.37
CASC4-211ENST00000561305 GABBR2O75899 941 aa12.73□□□□□ -0.37
CASC4-211ENST00000561305 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
CASC4-211ENST00000561305 FBXO3Q9UK99 471 aa12.73□□□□□ -0.37
CASC4-211ENST00000561305 ZRANB1Q9UGI0 708 aa12.71□□□□□ -0.37
CASC4-211ENST00000561305 PLCD3Q8N3E9 789 aa12.7□□□□□ -0.38
CASC4-211ENST00000561305 ZNF579Q8NAF0 562 aaKnown RBP12.7□□□□□ -0.38
CASC4-211ENST00000561305 PAK3O75914 559 aaPredicted RBP12.67□□□□□ -0.38
CASC4-211ENST00000561305 CLCN6P51797 869 aa12.67□□□□□ -0.38
CASC4-211ENST00000561305 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
CASC4-211ENST00000561305 VASPP50552 380 aaPredicted RBP12.57□□□□□ -0.4
CASC4-211ENST00000561305 PHF12Q96QT6 1004 aa12.56□□□□□ -0.4
CASC4-211ENST00000561305 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
CASC4-211ENST00000561305 NUBP1P53384 320 aa12.54□□□□□ -0.4
CASC4-211ENST00000561305 RASEFQ8IZ41 740 aa12.54□□□□□ -0.4
CASC4-211ENST00000561305 CCDC61Q9Y6R9 512 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms