RNA–Protein interactions for RNA: ENST00000560876.1

AC012404.1-201, humanhuman

TSL 3 BASIC

Gene AC012404.1, Length 476 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012404.1-201ENST00000560876 AEBP2Q6ZN18 517 aaPredicted RBP22.84■■□□□ 1.25
AC012404.1-201ENST00000560876 CHIC1Q5VXU3 224 aa21.81■■□□□ 1.08
AC012404.1-201ENST00000560876 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
AC012404.1-201ENST00000560876 PHF23Q9BUL5 403 aaPredicted RBP19.21■□□□□ 0.67
AC012404.1-201ENST00000560876 FOXD1Q16676 465 aa18.06■□□□□ 0.48
AC012404.1-201ENST00000560876 PLPPR3Q6T4P5 718 aa17.48■□□□□ 0.39
AC012404.1-201ENST00000560876 PPP6R1Q9UPN7 881 aa17.09■□□□□ 0.33
AC012404.1-201ENST00000560876 ADRA2BP18089 450 aa17.02■□□□□ 0.32
AC012404.1-201ENST00000560876 PIAS4Q8N2W9 510 aaPredicted RBP16.88■□□□□ 0.29
AC012404.1-201ENST00000560876 MSH5O43196 834 aa16.74■□□□□ 0.27
AC012404.1-201ENST00000560876 POTEDQ86YR6 584 aa16.06■□□□□ 0.16
AC012404.1-201ENST00000560876 MAPK8IP2Q13387 824 aaPredicted RBP15.6■□□□□ 0.09
AC012404.1-201ENST00000560876 SCAF1Q9H7N4 1312 aaKnown RBP15.44■□□□□ 0.06
AC012404.1-201ENST00000560876 DMRT2Q9Y5R5 561 aa15.39■□□□□ 0.05
AC012404.1-201ENST00000560876 PPP4R3CPQ6ZMV5 832 aa15.38■□□□□ 0.05
AC012404.1-201ENST00000560876 CNKSR2Q8WXI2 1034 aa15.01□□□□□ -0.01
AC012404.1-201ENST00000560876 HOXD11P31277 338 aaPredicted RBP14.92□□□□□ -0.02
AC012404.1-201ENST00000560876 RNF216Q9NWF9 866 aaPredicted RBP14.84□□□□□ -0.03
AC012404.1-201ENST00000560876 NCBP3Q53F19 620 aaKnown RBP14.77□□□□□ -0.05
AC012404.1-201ENST00000560876 DCAF8L1A6NGE4 600 aa14.7□□□□□ -0.06
AC012404.1-201ENST00000560876 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
AC012404.1-201ENST00000560876 KCNA4P22459 653 aa14.57□□□□□ -0.08
AC012404.1-201ENST00000560876 RNF39Q9H2S5 420 aa14.36□□□□□ -0.11
AC012404.1-201ENST00000560876 DNAJC5BQ9UF47 199 aa14.32□□□□□ -0.12
AC012404.1-201ENST00000560876 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
AC012404.1-201ENST00000560876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.16□□□□□ -0.14
AC012404.1-201ENST00000560876 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
AC012404.1-201ENST00000560876 SLC4A2P04920 1241 aa13.98□□□□□ -0.17
AC012404.1-201ENST00000560876 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.17
AC012404.1-201ENST00000560876 SLC4A1APQ9BWU0 796 aaKnown RBP13.75□□□□□ -0.21
AC012404.1-201ENST00000560876 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
AC012404.1-201ENST00000560876 CAPN15O75808 1086 aa13.6□□□□□ -0.23
AC012404.1-201ENST00000560876 DSG3P32926 999 aa13.52□□□□□ -0.25
AC012404.1-201ENST00000560876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.51□□□□□ -0.25
AC012404.1-201ENST00000560876 HNRNPUL2Q1KMD3 747 aaKnown RBP13.51□□□□□ -0.25
AC012404.1-201ENST00000560876 MYCNP04198 464 aaPredicted RBP13.49□□□□□ -0.25
AC012404.1-201ENST00000560876 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
AC012404.1-201ENST00000560876 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
AC012404.1-201ENST00000560876 ZBTB22O15209 634 aa13.45□□□□□ -0.26
AC012404.1-201ENST00000560876 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
AC012404.1-201ENST00000560876 APLP2Q06481 763 aa13.43□□□□□ -0.26
AC012404.1-201ENST00000560876 ZNF219Q9P2Y4 722 aaPredicted RBP13.39□□□□□ -0.27
AC012404.1-201ENST00000560876 ABCB7O75027 752 aa13.35□□□□□ -0.27
AC012404.1-201ENST00000560876 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
AC012404.1-201ENST00000560876 POLA2Q14181 598 aa13.14□□□□□ -0.31
AC012404.1-201ENST00000560876 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
AC012404.1-201ENST00000560876 CSRNP3Q8WYN3 585 aa12.98□□□□□ -0.33
AC012404.1-201ENST00000560876 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
AC012404.1-201ENST00000560876 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
AC012404.1-201ENST00000560876 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
AC012404.1-201ENST00000560876 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
AC012404.1-201ENST00000560876 MKRN4PQ13434 485 aaPredicted RBP12.66□□□□□ -0.38
AC012404.1-201ENST00000560876 FBLN2P98095 1184 aa12.6□□□□□ -0.39
AC012404.1-201ENST00000560876 POTEHQ6S545 545 aa12.6□□□□□ -0.39
AC012404.1-201ENST00000560876 AKT1S1Q96B36 256 aa12.6□□□□□ -0.39
AC012404.1-201ENST00000560876 REM2Q8IYK8 340 aaPredicted RBP12.51□□□□□ -0.41
AC012404.1-201ENST00000560876 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
AC012404.1-201ENST00000560876 SPDYE2BA6NHP3 402 aa12.48□□□□□ -0.41
AC012404.1-201ENST00000560876 SPDYE6P0CI01 402 aa12.48□□□□□ -0.41
AC012404.1-201ENST00000560876 SPDYE2Q495Y8 402 aa12.48□□□□□ -0.41
AC012404.1-201ENST00000560876 PITPNM1O00562 1244 aa12.38□□□□□ -0.43
AC012404.1-201ENST00000560876 SSUH2Q9Y2M2 353 aa12.38□□□□□ -0.43
AC012404.1-201ENST00000560876 ZNF692Q9BU19 519 aaPredicted RBP12.37□□□□□ -0.43
AC012404.1-201ENST00000560876 PIP4P2Q8N4L2 257 aa12.27□□□□□ -0.45
AC012404.1-201ENST00000560876 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
AC012404.1-201ENST00000560876 PABPN1Q86U42 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
AC012404.1-201ENST00000560876 SPDYE1Q8NFV5 336 aaPredicted RBP12.2□□□□□ -0.46
AC012404.1-201ENST00000560876 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
AC012404.1-201ENST00000560876 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
AC012404.1-201ENST00000560876 PRKAR2AP13861 404 aaKnown RBP12.04□□□□□ -0.48
AC012404.1-201ENST00000560876 PRR29P0C7W0 189 aa12□□□□□ -0.49
AC012404.1-201ENST00000560876 CHADLQ6NUI6 762 aa11.99□□□□□ -0.49
AC012404.1-201ENST00000560876 HAX1O00165 279 aa11.96□□□□□ -0.49
AC012404.1-201ENST00000560876 EVX2Q03828 476 aa11.93□□□□□ -0.5
AC012404.1-201ENST00000560876 SP7Q8TDD2 431 aaPredicted RBP11.9□□□□□ -0.5
AC012404.1-201ENST00000560876 PROM2Q8N271 834 aa11.89□□□□□ -0.51
AC012404.1-201ENST00000560876 STAG3Q9UJ98 1225 aa11.86□□□□□ -0.51
AC012404.1-201ENST00000560876 C19orf67A6NJJ6 358 aa11.83□□□□□ -0.52
AC012404.1-201ENST00000560876 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
AC012404.1-201ENST00000560876 FARP1Q9Y4F1 1045 aaPredicted RBP11.8□□□□□ -0.52
AC012404.1-201ENST00000560876 FKBP8Q14318 412 aa11.72□□□□□ -0.53
AC012404.1-201ENST00000560876 CD44P16070 742 aaKnown RBP11.67□□□□□ -0.54
AC012404.1-201ENST00000560876 MNX1P50219 401 aaPredicted RBP11.66□□□□□ -0.54
AC012404.1-201ENST00000560876 GABBR2O75899 941 aa11.61□□□□□ -0.55
AC012404.1-201ENST00000560876 ZRANB1Q9UGI0 708 aa11.53□□□□□ -0.56
AC012404.1-201ENST00000560876 NPM1P06748 294 aaKnown RBP eCLIP11.52□□□□□ -0.57
AC012404.1-201ENST00000560876 ZNF579Q8NAF0 562 aaKnown RBP11.51□□□□□ -0.57
AC012404.1-201ENST00000560876 MIER1Q8N108 512 aa11.49□□□□□ -0.57
AC012404.1-201ENST00000560876 PHF12Q96QT6 1004 aa11.43□□□□□ -0.58
AC012404.1-201ENST00000560876 POTEIP0CG38 1075 aa11.42□□□□□ -0.58
AC012404.1-201ENST00000560876 PLCD3Q8N3E9 789 aa11.42□□□□□ -0.58
AC012404.1-201ENST00000560876 PAK3O75914 559 aaPredicted RBP11.4□□□□□ -0.58
AC012404.1-201ENST00000560876 CLCN6P51797 869 aa11.4□□□□□ -0.58
AC012404.1-201ENST00000560876 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
AC012404.1-201ENST00000560876 PLEKHG5O94827 1062 aa11.37□□□□□ -0.59
AC012404.1-201ENST00000560876 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
AC012404.1-201ENST00000560876 RASEFQ8IZ41 740 aa11.36□□□□□ -0.59
AC012404.1-201ENST00000560876 FBXO3Q9UK99 471 aa11.34□□□□□ -0.59
AC012404.1-201ENST00000560876 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
AC012404.1-201ENST00000560876 NUBP1P53384 320 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms