RNA–Protein interactions for RNA: ENST00000560155.5

IPO4-211, Transcript of importin 4, humanhuman

TSL 1 (best)

Gene IPO4, Length 3,485 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IPO4-211ENST00000560155 NISCHQ9Y2I1 1504 aa25.59■■□□□ 1.69
IPO4-211ENST00000560155 DCAF8L2P0C7V8 631 aa22■■□□□ 1.11
IPO4-211ENST00000560155 CCDC180Q9P1Z9 1646 aa21.88■■□□□ 1.09
IPO4-211ENST00000560155 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
IPO4-211ENST00000560155 ZCCHC6Q5VYS8 1495 aaKnown RBP21.47■■□□□ 1.03
IPO4-211ENST00000560155 ABCC9O60706 1549 aa21.32■■□□□ 1
IPO4-211ENST00000560155 SUPT5HO00267 1087 aaKnown RBP21.06■□□□□ 0.96
IPO4-211ENST00000560155 SCRIBQ14160 1630 aa20.76■□□□□ 0.91
IPO4-211ENST00000560155 DCAF1Q9Y4B6 1507 aa20.76■□□□□ 0.91
IPO4-211ENST00000560155 NACADO15069 1562 aa20.46■□□□□ 0.87
IPO4-211ENST00000560155 PABPN1Q86U42 306 aaKnown RBP eCLIP20.38■□□□□ 0.851e-6■■■□□ 18.5
IPO4-211ENST00000560155 RB1CC1Q8TDY2 1594 aa20.35■□□□□ 0.85
IPO4-211ENST00000560155 MYO15BQ96JP2 1530 aa20.35■□□□□ 0.85
IPO4-211ENST00000560155 CECR2Q9BXF3 1484 aa20.18■□□□□ 0.82
IPO4-211ENST00000560155 RSF1Q96T23 1441 aaPredicted RBP20.06■□□□□ 0.8
IPO4-211ENST00000560155 UNC13AQ9UPW8 1703 aa20.03■□□□□ 0.8
IPO4-211ENST00000560155 MROH2BQ7Z745 1585 aa19.97■□□□□ 0.79
IPO4-211ENST00000560155 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
IPO4-211ENST00000560155 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
IPO4-211ENST00000560155 WIZO95785 1651 aa19.84■□□□□ 0.77
IPO4-211ENST00000560155 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
IPO4-211ENST00000560155 EHMT2Q96KQ7 1210 aa19.64■□□□□ 0.73
IPO4-211ENST00000560155 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
IPO4-211ENST00000560155 FAM9AQ8IZU1 332 aaPredicted RBP19.58■□□□□ 0.73
IPO4-211ENST00000560155 TRIM41Q8WV44 630 aa19.51■□□□□ 0.71
IPO4-211ENST00000560155 LOC105371045A0A1W2PR82 267 aa19.49■□□□□ 0.71
IPO4-211ENST00000560155 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
IPO4-211ENST00000560155 TOP2AP11388 1531 aaKnown RBP19.37■□□□□ 0.69
IPO4-211ENST00000560155 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
IPO4-211ENST00000560155 BAZ1BQ9UIG0 1483 aaKnown RBP19.29■□□□□ 0.68
IPO4-211ENST00000560155 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
IPO4-211ENST00000560155 EIF4G1Q04637 1599 aaKnown RBP19.27■□□□□ 0.68
IPO4-211ENST00000560155 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
IPO4-211ENST00000560155 PEG3Q9GZU2 1588 aa19.11■□□□□ 0.65
IPO4-211ENST00000560155 DNAJC5BQ9UF47 199 aa19.07■□□□□ 0.64
IPO4-211ENST00000560155 CC2D2AQ9P2K1 1620 aa19.01■□□□□ 0.63
IPO4-211ENST00000560155 NCAPD3P42695 1498 aa18.99■□□□□ 0.63
IPO4-211ENST00000560155 SOGA1O94964 1423 aa18.93■□□□□ 0.62
IPO4-211ENST00000560155 RUSC2Q8N2Y8 1516 aa18.9■□□□□ 0.62
IPO4-211ENST00000560155 WRNQ14191 1432 aaPredicted RBP eCLIP18.9■□□□□ 0.62
IPO4-211ENST00000560155 HMGXB3Q12766 1538 aa18.87■□□□□ 0.61
IPO4-211ENST00000560155 RANGAP1P46060 587 aaPredicted RBP18.86■□□□□ 0.61
IPO4-211ENST00000560155 PPARGC1BQ86YN6 1023 aaKnown RBP18.86■□□□□ 0.61
IPO4-211ENST00000560155 SYNJ1O43426 1573 aa18.82■□□□□ 0.6
IPO4-211ENST00000560155 PCGF6Q9BYE7 350 aa18.78■□□□□ 0.6
IPO4-211ENST00000560155 TTBK1Q5TCY1 1321 aaPredicted RBP18.77■□□□□ 0.6
IPO4-211ENST00000560155 UBTFP17480 764 aaKnown RBP18.76■□□□□ 0.59
IPO4-211ENST00000560155 NESP48681 1621 aa18.76■□□□□ 0.59
IPO4-211ENST00000560155 CSRNP3Q8WYN3 585 aa18.72■□□□□ 0.59
IPO4-211ENST00000560155 CADPSQ9ULU8 1353 aa18.69■□□□□ 0.58
IPO4-211ENST00000560155 CFTRP13569 1480 aa18.68■□□□□ 0.58
IPO4-211ENST00000560155 CUX1P39880 1505 aa18.6■□□□□ 0.57
IPO4-211ENST00000560155 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
IPO4-211ENST00000560155 FANCD2Q9BXW9 1451 aa18.53■□□□□ 0.56
IPO4-211ENST00000560155 TOP2BQ02880 1626 aa18.52■□□□□ 0.56
IPO4-211ENST00000560155 HRCP23327 699 aa18.48■□□□□ 0.55
IPO4-211ENST00000560155 RAPGEF2Q9Y4G8 1499 aa18.45■□□□□ 0.54
IPO4-211ENST00000560155 CEP162Q5TB80 1403 aa18.44■□□□□ 0.54
IPO4-211ENST00000560155 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
IPO4-211ENST00000560155 RAD54L2Q9Y4B4 1467 aa18.42■□□□□ 0.54
IPO4-211ENST00000560155 CUX2O14529 1486 aa18.41■□□□□ 0.54
IPO4-211ENST00000560155 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
IPO4-211ENST00000560155 EEA1Q15075 1411 aa18.4■□□□□ 0.54
IPO4-211ENST00000560155 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
IPO4-211ENST00000560155 CEP164Q9UPV0 1460 aa18.35■□□□□ 0.53
IPO4-211ENST00000560155 TNIKQ9UKE5 1360 aa18.35■□□□□ 0.53
IPO4-211ENST00000560155 KIF27Q86VH2 1401 aa18.35■□□□□ 0.53
IPO4-211ENST00000560155 TRIM26Q12899 539 aaPredicted RBP18.34■□□□□ 0.53
IPO4-211ENST00000560155 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
IPO4-211ENST00000560155 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
IPO4-211ENST00000560155 TDRD9Q8NDG6 1382 aaKnown RBP18.3■□□□□ 0.52
IPO4-211ENST00000560155 URB2Q14146 1524 aaKnown RBP18.3■□□□□ 0.52
IPO4-211ENST00000560155 PDS5BQ9NTI5 1447 aa18.28■□□□□ 0.52
IPO4-211ENST00000560155 POLA1P09884 1462 aaPredicted RBP18.27■□□□□ 0.52
IPO4-211ENST00000560155 KIF21AQ7Z4S6 1674 aa18.27■□□□□ 0.52
IPO4-211ENST00000560155 P3H3Q8IVL6 736 aa18.27■□□□□ 0.52
IPO4-211ENST00000560155 LAMC3Q9Y6N6 1575 aa18.27■□□□□ 0.51
IPO4-211ENST00000560155 CLIP1P30622 1438 aa18.26■□□□□ 0.51
IPO4-211ENST00000560155 IGF1RP08069 1367 aa18.24■□□□□ 0.51
IPO4-211ENST00000560155 DNMBPQ6XZF7 1577 aa18.21■□□□□ 0.51
IPO4-211ENST00000560155 KIF21BO75037 1637 aa18.21■□□□□ 0.51
IPO4-211ENST00000560155 CARMIL1Q5VZK9 1371 aa18.19■□□□□ 0.5
IPO4-211ENST00000560155 PRXQ9BXM0 1461 aa18.19■□□□□ 0.5
IPO4-211ENST00000560155 ERCC6Q03468 1493 aa18.17■□□□□ 0.5
IPO4-211ENST00000560155 ATP1B4Q9UN42 357 aaPredicted RBP18.17■□□□□ 0.5
IPO4-211ENST00000560155 APLP2Q06481 763 aa18.11■□□□□ 0.49
IPO4-211ENST00000560155 AQRO60306 1485 aaKnown RBP eCLIP18.1■□□□□ 0.491e-6■■■■■ 27.6
IPO4-211ENST00000560155 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
IPO4-211ENST00000560155 FBLN2P98095 1184 aa18.04■□□□□ 0.48
IPO4-211ENST00000560155 MRC2Q9UBG0 1479 aa18.03■□□□□ 0.48
IPO4-211ENST00000560155 MYT1Q01538 1121 aa18.03■□□□□ 0.48
IPO4-211ENST00000560155 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.48
IPO4-211ENST00000560155 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.48
IPO4-211ENST00000560155 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.47
IPO4-211ENST00000560155 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
IPO4-211ENST00000560155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.01■□□□□ 0.47
IPO4-211ENST00000560155 HNRNPUL2Q1KMD3 747 aaKnown RBP18.01■□□□□ 0.47
IPO4-211ENST00000560155 VPS8Q8N3P4 1428 aa18■□□□□ 0.47
IPO4-211ENST00000560155 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
IPO4-211ENST00000560155 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms