RNA–Protein interactions for RNA: ENST00000560056.1

AC040918.1-201, humanhuman

TSL 2 BASIC

Gene AC040918.1, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040918.1-201ENST00000560056 AEBP2Q6ZN18 517 aaPredicted RBP27.33■■□□□ 1.97
AC040918.1-201ENST00000560056 CHIC1Q5VXU3 224 aa25.76■■□□□ 1.71
AC040918.1-201ENST00000560056 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
AC040918.1-201ENST00000560056 PHF23Q9BUL5 403 aaPredicted RBP23.12■■□□□ 1.29
AC040918.1-201ENST00000560056 FOXD1Q16676 465 aa21.97■■□□□ 1.11
AC040918.1-201ENST00000560056 POTEDQ86YR6 584 aa21.56■■□□□ 1.04
AC040918.1-201ENST00000560056 MSH5O43196 834 aa21■□□□□ 0.95
AC040918.1-201ENST00000560056 PIAS4Q8N2W9 510 aaPredicted RBP20.48■□□□□ 0.87
AC040918.1-201ENST00000560056 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
AC040918.1-201ENST00000560056 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
AC040918.1-201ENST00000560056 ADRA2BP18089 450 aa19.88■□□□□ 0.77
AC040918.1-201ENST00000560056 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
AC040918.1-201ENST00000560056 CACNB1Q02641 598 aaPredicted RBP18.43■□□□□ 0.54
AC040918.1-201ENST00000560056 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
AC040918.1-201ENST00000560056 SCAF1Q9H7N4 1312 aaKnown RBP18.39■□□□□ 0.53
AC040918.1-201ENST00000560056 DCAF8L1A6NGE4 600 aa17.96■□□□□ 0.47
AC040918.1-201ENST00000560056 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
AC040918.1-201ENST00000560056 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
AC040918.1-201ENST00000560056 C1QBPQ07021 282 aaKnown RBP17.53■□□□□ 0.4
AC040918.1-201ENST00000560056 PPP4R3CPQ6ZMV5 832 aa17.41■□□□□ 0.38
AC040918.1-201ENST00000560056 RNF216Q9NWF9 866 aaPredicted RBP17.31■□□□□ 0.36
AC040918.1-201ENST00000560056 CNKSR2Q8WXI2 1034 aa17.3■□□□□ 0.36
AC040918.1-201ENST00000560056 DNAJC5BQ9UF47 199 aa17.17■□□□□ 0.34
AC040918.1-201ENST00000560056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.86■□□□□ 0.29
AC040918.1-201ENST00000560056 POTEHQ6S545 545 aa16.81■□□□□ 0.28
AC040918.1-201ENST00000560056 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
AC040918.1-201ENST00000560056 CAPN15O75808 1086 aa16.41■□□□□ 0.22
AC040918.1-201ENST00000560056 DSG3P32926 999 aa16.37■□□□□ 0.21
AC040918.1-201ENST00000560056 U3KPZ7 1027 aaPredicted RBP16.31■□□□□ 0.2
AC040918.1-201ENST00000560056 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
AC040918.1-201ENST00000560056 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
AC040918.1-201ENST00000560056 APLP2Q06481 763 aa16.03■□□□□ 0.16
AC040918.1-201ENST00000560056 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.15
AC040918.1-201ENST00000560056 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
AC040918.1-201ENST00000560056 ABCB7O75027 752 aa15.9■□□□□ 0.14
AC040918.1-201ENST00000560056 RBM42Q9BTD8 480 aaKnown RBP15.81■□□□□ 0.12
AC040918.1-201ENST00000560056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
AC040918.1-201ENST00000560056 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
AC040918.1-201ENST00000560056 SLC4A2P04920 1241 aa15.65■□□□□ 0.1
AC040918.1-201ENST00000560056 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
AC040918.1-201ENST00000560056 SAMD1Q6SPF0 538 aaPredicted RBP15.63■□□□□ 0.09
AC040918.1-201ENST00000560056 SP7Q8TDD2 431 aaPredicted RBP15.44■□□□□ 0.06
AC040918.1-201ENST00000560056 POLA2Q14181 598 aa15.32■□□□□ 0.04
AC040918.1-201ENST00000560056 KCNA4P22459 653 aa15.31■□□□□ 0.04
AC040918.1-201ENST00000560056 AKT1S1Q96B36 256 aa15.22■□□□□ 0.03
AC040918.1-201ENST00000560056 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
AC040918.1-201ENST00000560056 ZBTB12Q9Y330 459 aaPredicted RBP15.1■□□□□ 0.01
AC040918.1-201ENST00000560056 HAX1O00165 279 aa15.07■□□□□ 0
AC040918.1-201ENST00000560056 PIP4P2Q8N4L2 257 aa15.07■□□□□ 0
AC040918.1-201ENST00000560056 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
AC040918.1-201ENST00000560056 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
AC040918.1-201ENST00000560056 PITPNM1O00562 1244 aa14.87□□□□□ -0.03
AC040918.1-201ENST00000560056 FXR2P51116 673 aaKnown RBP eCLIP14.85□□□□□ -0.03
AC040918.1-201ENST00000560056 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
AC040918.1-201ENST00000560056 EVX2Q03828 476 aa14.63□□□□□ -0.07
AC040918.1-201ENST00000560056 FOXD4L1Q9NU39 408 aa14.61□□□□□ -0.07
AC040918.1-201ENST00000560056 PRKAR2AP13861 404 aaKnown RBP14.51□□□□□ -0.09
AC040918.1-201ENST00000560056 SPDYE2BA6NHP3 402 aa14.49□□□□□ -0.09
AC040918.1-201ENST00000560056 SPDYE6P0CI01 402 aa14.49□□□□□ -0.09
AC040918.1-201ENST00000560056 SPDYE2Q495Y8 402 aa14.49□□□□□ -0.09
AC040918.1-201ENST00000560056 LHX8Q68G74 356 aa14.47□□□□□ -0.09
AC040918.1-201ENST00000560056 SPDYE1Q8NFV5 336 aaPredicted RBP14.45□□□□□ -0.1
AC040918.1-201ENST00000560056 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
AC040918.1-201ENST00000560056 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
AC040918.1-201ENST00000560056 C19orf67A6NJJ6 358 aa14.41□□□□□ -0.1
AC040918.1-201ENST00000560056 FBLN2P98095 1184 aa14.41□□□□□ -0.1
AC040918.1-201ENST00000560056 SLC4A1APQ9BWU0 796 aaKnown RBP14.4□□□□□ -0.1
AC040918.1-201ENST00000560056 GABBR2O75899 941 aa14.38□□□□□ -0.11
AC040918.1-201ENST00000560056 ATXN8OSP0DMR3 200 aa14.23□□□□□ -0.13
AC040918.1-201ENST00000560056 ZNF692Q9BU19 519 aaPredicted RBP14.21□□□□□ -0.13
AC040918.1-201ENST00000560056 PLSCR2Q9NRY7 297 aa14.2□□□□□ -0.14
AC040918.1-201ENST00000560056 SSUH2Q9Y2M2 353 aa14.15□□□□□ -0.14
AC040918.1-201ENST00000560056 CHADLQ6NUI6 762 aa14.14□□□□□ -0.15
AC040918.1-201ENST00000560056 PRR29P0C7W0 189 aa14.1□□□□□ -0.15
AC040918.1-201ENST00000560056 CLCN6P51797 869 aa14.06□□□□□ -0.16
AC040918.1-201ENST00000560056 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
AC040918.1-201ENST00000560056 ZBTB22O15209 634 aa13.99□□□□□ -0.17
AC040918.1-201ENST00000560056 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
AC040918.1-201ENST00000560056 POTEIP0CG38 1075 aa13.98□□□□□ -0.17
AC040918.1-201ENST00000560056 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
AC040918.1-201ENST00000560056 PABPN1Q86U42 306 aaKnown RBP eCLIP13.94□□□□□ -0.18
AC040918.1-201ENST00000560056 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
AC040918.1-201ENST00000560056 ZNF579Q8NAF0 562 aaKnown RBP13.76□□□□□ -0.21
AC040918.1-201ENST00000560056 ZRANB1Q9UGI0 708 aa13.72□□□□□ -0.21
AC040918.1-201ENST00000560056 POTEMA6NI47 508 aa13.68□□□□□ -0.22
AC040918.1-201ENST00000560056 OTUD5Q96G74 571 aa13.65□□□□□ -0.22
AC040918.1-201ENST00000560056 POTEGQ6S5H5 508 aa13.61□□□□□ -0.23
AC040918.1-201ENST00000560056 GALR2O43603 387 aaPredicted RBP13.6□□□□□ -0.23
AC040918.1-201ENST00000560056 PAK3O75914 559 aaPredicted RBP13.59□□□□□ -0.23
AC040918.1-201ENST00000560056 PCDH10Q9P2E7 1040 aa13.56□□□□□ -0.24
AC040918.1-201ENST00000560056 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
AC040918.1-201ENST00000560056 POTEB2H3BUK9 544 aa13.49□□□□□ -0.25
AC040918.1-201ENST00000560056 CREBZFQ9NS37 354 aa13.47□□□□□ -0.25
AC040918.1-201ENST00000560056 PHF12Q96QT6 1004 aa13.41□□□□□ -0.26
AC040918.1-201ENST00000560056 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
AC040918.1-201ENST00000560056 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
AC040918.1-201ENST00000560056 METRNQ9UJH8 293 aa13.37□□□□□ -0.27
AC040918.1-201ENST00000560056 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
AC040918.1-201ENST00000560056 C7P10643 843 aa13.33□□□□□ -0.28
AC040918.1-201ENST00000560056 PELP1Q8IZL8 1130 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms