RNA–Protein interactions for RNA: ENST00000559906.1

PSMA4-214, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-214ENST00000559906 AEBP2Q6ZN18 517 aaPredicted RBP21.15■□□□□ 0.98
PSMA4-214ENST00000559906 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
PSMA4-214ENST00000559906 SENP3Q9H4L4 574 aaPredicted RBP18.28■□□□□ 0.52
PSMA4-214ENST00000559906 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
PSMA4-214ENST00000559906 FOXD1Q16676 465 aa17.02■□□□□ 0.32
PSMA4-214ENST00000559906 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
PSMA4-214ENST00000559906 MSH5O43196 834 aa16.27■□□□□ 0.2
PSMA4-214ENST00000559906 PIAS4Q8N2W9 510 aaPredicted RBP15.83■□□□□ 0.12
PSMA4-214ENST00000559906 PLPPR3Q6T4P5 718 aa15.44■□□□□ 0.06
PSMA4-214ENST00000559906 PPP6R1Q9UPN7 881 aa15.41■□□□□ 0.06
PSMA4-214ENST00000559906 ADRA2BP18089 450 aa15.36■□□□□ 0.05
PSMA4-214ENST00000559906 DMRT2Q9Y5R5 561 aa14.36□□□□□ -0.11
PSMA4-214ENST00000559906 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
PSMA4-214ENST00000559906 MAPK8IP2Q13387 824 aaPredicted RBP14.27□□□□□ -0.13
PSMA4-214ENST00000559906 SCAF1Q9H7N4 1312 aaKnown RBP14.22□□□□□ -0.13
PSMA4-214ENST00000559906 DCAF8L1A6NGE4 600 aa13.87□□□□□ -0.19
PSMA4-214ENST00000559906 RNF39Q9H2S5 420 aa13.75□□□□□ -0.21
PSMA4-214ENST00000559906 HOXD11P31277 338 aaPredicted RBP13.58□□□□□ -0.24
PSMA4-214ENST00000559906 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
PSMA4-214ENST00000559906 PPP4R3CPQ6ZMV5 832 aa13.41□□□□□ -0.26
PSMA4-214ENST00000559906 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
PSMA4-214ENST00000559906 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
PSMA4-214ENST00000559906 DNAJC5BQ9UF47 199 aa13.28□□□□□ -0.28
PSMA4-214ENST00000559906 POTEHQ6S545 545 aa13.09□□□□□ -0.31
PSMA4-214ENST00000559906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.02□□□□□ -0.33
PSMA4-214ENST00000559906 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
PSMA4-214ENST00000559906 CAPN15O75808 1086 aa12.68□□□□□ -0.38
PSMA4-214ENST00000559906 DSG3P32926 999 aa12.68□□□□□ -0.38
PSMA4-214ENST00000559906 SPINK5Q9NQ38 1064 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-214ENST00000559906 U3KPZ7 1027 aaPredicted RBP12.58□□□□□ -0.4
PSMA4-214ENST00000559906 NPM3O75607 178 aaKnown RBP12.5□□□□□ -0.41
PSMA4-214ENST00000559906 APLP2Q06481 763 aa12.35□□□□□ -0.43
PSMA4-214ENST00000559906 TRHP20396 242 aaPredicted RBP12.31□□□□□ -0.44
PSMA4-214ENST00000559906 ZNF219Q9P2Y4 722 aaPredicted RBP12.3□□□□□ -0.44
PSMA4-214ENST00000559906 ABCB7O75027 752 aa12.27□□□□□ -0.45
PSMA4-214ENST00000559906 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
PSMA4-214ENST00000559906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
PSMA4-214ENST00000559906 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
PSMA4-214ENST00000559906 CHRDL2Q6WN34 429 aa12.13□□□□□ -0.47
PSMA4-214ENST00000559906 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
PSMA4-214ENST00000559906 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
PSMA4-214ENST00000559906 SP7Q8TDD2 431 aaPredicted RBP12□□□□□ -0.49
PSMA4-214ENST00000559906 POLA2Q14181 598 aa11.83□□□□□ -0.52
PSMA4-214ENST00000559906 KCNA4P22459 653 aa11.81□□□□□ -0.52
PSMA4-214ENST00000559906 AKT1S1Q96B36 256 aa11.76□□□□□ -0.53
PSMA4-214ENST00000559906 HAX1O00165 279 aa11.7□□□□□ -0.54
PSMA4-214ENST00000559906 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
PSMA4-214ENST00000559906 MYCNP04198 464 aaPredicted RBP11.64□□□□□ -0.55
PSMA4-214ENST00000559906 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
PSMA4-214ENST00000559906 ZBTB12Q9Y330 459 aaPredicted RBP11.62□□□□□ -0.55
PSMA4-214ENST00000559906 FXR2P51116 673 aaKnown RBP eCLIP11.51□□□□□ -0.57
PSMA4-214ENST00000559906 PITPNM1O00562 1244 aa11.48□□□□□ -0.57
PSMA4-214ENST00000559906 OSCARQ8IYS5 282 aa11.45□□□□□ -0.58
PSMA4-214ENST00000559906 EVX2Q03828 476 aa11.37□□□□□ -0.59
PSMA4-214ENST00000559906 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
PSMA4-214ENST00000559906 LHX8Q68G74 356 aa11.25□□□□□ -0.61
PSMA4-214ENST00000559906 PRKAR2AP13861 404 aaKnown RBP11.22□□□□□ -0.61
PSMA4-214ENST00000559906 SLC4A1APQ9BWU0 796 aaKnown RBP11.19□□□□□ -0.62
PSMA4-214ENST00000559906 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
PSMA4-214ENST00000559906 SPDYE2BA6NHP3 402 aa11.17□□□□□ -0.62
PSMA4-214ENST00000559906 SPDYE6P0CI01 402 aa11.17□□□□□ -0.62
PSMA4-214ENST00000559906 SPDYE2Q495Y8 402 aa11.17□□□□□ -0.62
PSMA4-214ENST00000559906 C19orf67A6NJJ6 358 aa11.16□□□□□ -0.62
PSMA4-214ENST00000559906 GABBR2O75899 941 aa11.15□□□□□ -0.62
PSMA4-214ENST00000559906 CLEC11AQ9Y240 323 aa11.15□□□□□ -0.62
PSMA4-214ENST00000559906 SPDYE1Q8NFV5 336 aaPredicted RBP11.14□□□□□ -0.63
PSMA4-214ENST00000559906 FBLN2P98095 1184 aa11.07□□□□□ -0.64
PSMA4-214ENST00000559906 PLSCR2Q9NRY7 297 aa11.07□□□□□ -0.64
PSMA4-214ENST00000559906 ZNF692Q9BU19 519 aaPredicted RBP10.94□□□□□ -0.66
PSMA4-214ENST00000559906 ATXN8OSP0DMR3 200 aa10.92□□□□□ -0.66
PSMA4-214ENST00000559906 CHADLQ6NUI6 762 aa10.92□□□□□ -0.66
PSMA4-214ENST00000559906 ZBTB22O15209 634 aa10.9□□□□□ -0.66
PSMA4-214ENST00000559906 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
PSMA4-214ENST00000559906 CLCN6P51797 869 aa10.89□□□□□ -0.67
PSMA4-214ENST00000559906 SSUH2Q9Y2M2 353 aa10.89□□□□□ -0.67
PSMA4-214ENST00000559906 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
PSMA4-214ENST00000559906 CD44P16070 742 aaKnown RBP10.84□□□□□ -0.67
PSMA4-214ENST00000559906 DCBLD2Q96PD2 775 aa10.81□□□□□ -0.68
PSMA4-214ENST00000559906 MKRN4PQ13434 485 aaPredicted RBP10.76□□□□□ -0.69
PSMA4-214ENST00000559906 PABPN1Q86U42 306 aaKnown RBP eCLIP10.74□□□□□ -0.69
PSMA4-214ENST00000559906 FARP1Q9Y4F1 1045 aaPredicted RBP10.73□□□□□ -0.69
PSMA4-214ENST00000559906 CSRNP3Q8WYN3 585 aa10.64□□□□□ -0.71
PSMA4-214ENST00000559906 EHMT2Q96KQ7 1210 aa10.64□□□□□ -0.71
PSMA4-214ENST00000559906 POTEMA6NI47 508 aa10.63□□□□□ -0.71
PSMA4-214ENST00000559906 ZNF579Q8NAF0 562 aaKnown RBP10.62□□□□□ -0.71
PSMA4-214ENST00000559906 OTUD5Q96G74 571 aa10.6□□□□□ -0.71
PSMA4-214ENST00000559906 ZRANB1Q9UGI0 708 aa10.6□□□□□ -0.71
PSMA4-214ENST00000559906 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
PSMA4-214ENST00000559906 PCDH10Q9P2E7 1040 aa10.56□□□□□ -0.72
PSMA4-214ENST00000559906 GALR2O43603 387 aaPredicted RBP10.5□□□□□ -0.73
PSMA4-214ENST00000559906 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
PSMA4-214ENST00000559906 PAK3O75914 559 aaPredicted RBP10.47□□□□□ -0.73
PSMA4-214ENST00000559906 CREBZFQ9NS37 354 aa10.38□□□□□ -0.75
PSMA4-214ENST00000559906 STAG3Q9UJ98 1225 aa10.38□□□□□ -0.75
PSMA4-214ENST00000559906 MAMSTRQ6ZN01 415 aa10.37□□□□□ -0.75
PSMA4-214ENST00000559906 PHF12Q96QT6 1004 aa10.34□□□□□ -0.75
PSMA4-214ENST00000559906 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
PSMA4-214ENST00000559906 C7P10643 843 aa10.31□□□□□ -0.76
PSMA4-214ENST00000559906 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
PSMA4-214ENST00000559906 SLC39A7Q92504 469 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms