RNA–Protein interactions for RNA: ENST00000559476.2

ZEB1-215, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 1,205 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-215ENST00000559476 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
ZEB1-215ENST00000559476 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
ZEB1-215ENST00000559476 SENP3Q9H4L4 574 aaPredicted RBP20.89■□□□□ 0.93
ZEB1-215ENST00000559476 PHF23Q9BUL5 403 aaPredicted RBP20.57■□□□□ 0.88
ZEB1-215ENST00000559476 FOXD1Q16676 465 aa19.35■□□□□ 0.69
ZEB1-215ENST00000559476 PLPPR3Q6T4P5 718 aa18.79■□□□□ 0.6
ZEB1-215ENST00000559476 MSH5O43196 834 aa18.18■□□□□ 0.5
ZEB1-215ENST00000559476 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
ZEB1-215ENST00000559476 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
ZEB1-215ENST00000559476 ADRA2BP18089 450 aa18.12■□□□□ 0.49
ZEB1-215ENST00000559476 POTEDQ86YR6 584 aa17.37■□□□□ 0.37
ZEB1-215ENST00000559476 SCAF1Q9H7N4 1312 aaKnown RBP16.77■□□□□ 0.28
ZEB1-215ENST00000559476 MAPK8IP2Q13387 824 aaPredicted RBP16.57■□□□□ 0.24
ZEB1-215ENST00000559476 DMRT2Q9Y5R5 561 aa16.56■□□□□ 0.24
ZEB1-215ENST00000559476 PPP4R3CPQ6ZMV5 832 aa16.44■□□□□ 0.22
ZEB1-215ENST00000559476 CNKSR2Q8WXI2 1034 aa16.15■□□□□ 0.18
ZEB1-215ENST00000559476 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
ZEB1-215ENST00000559476 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
ZEB1-215ENST00000559476 NCBP3Q53F19 620 aaKnown RBP15.95■□□□□ 0.14
ZEB1-215ENST00000559476 DCAF8L1A6NGE4 600 aa15.82■□□□□ 0.12
ZEB1-215ENST00000559476 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
ZEB1-215ENST00000559476 DNAJC5BQ9UF47 199 aa15.55■□□□□ 0.08
ZEB1-215ENST00000559476 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
ZEB1-215ENST00000559476 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
ZEB1-215ENST00000559476 KCNA4P22459 653 aa15.39■□□□□ 0.05
ZEB1-215ENST00000559476 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
ZEB1-215ENST00000559476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.26■□□□□ 0.03
ZEB1-215ENST00000559476 U3KPZ7 1027 aaPredicted RBP14.9□□□□□ -0.02
ZEB1-215ENST00000559476 SLC4A2P04920 1241 aa14.83□□□□□ -0.04
ZEB1-215ENST00000559476 APLP2Q06481 763 aa14.7□□□□□ -0.06
ZEB1-215ENST00000559476 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
ZEB1-215ENST00000559476 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
ZEB1-215ENST00000559476 CAPN15O75808 1086 aa14.63□□□□□ -0.07
ZEB1-215ENST00000559476 SLC4A1APQ9BWU0 796 aaKnown RBP14.63□□□□□ -0.07
ZEB1-215ENST00000559476 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
ZEB1-215ENST00000559476 SAMD1Q6SPF0 538 aaPredicted RBP14.58□□□□□ -0.08
ZEB1-215ENST00000559476 DSG3P32926 999 aa14.51□□□□□ -0.09
ZEB1-215ENST00000559476 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
ZEB1-215ENST00000559476 ZNF219Q9P2Y4 722 aaPredicted RBP14.49□□□□□ -0.09
ZEB1-215ENST00000559476 TRHP20396 242 aaPredicted RBP14.41□□□□□ -0.1
ZEB1-215ENST00000559476 FOXD4L1Q9NU39 408 aa14.41□□□□□ -0.1
ZEB1-215ENST00000559476 ABCB7O75027 752 aa14.25□□□□□ -0.13
ZEB1-215ENST00000559476 ZBTB22O15209 634 aa14.12□□□□□ -0.15
ZEB1-215ENST00000559476 POLA2Q14181 598 aa14.07□□□□□ -0.16
ZEB1-215ENST00000559476 ATXN8OSP0DMR3 200 aa14.03□□□□□ -0.16
ZEB1-215ENST00000559476 ATF5Q9Y2D1 282 aaPredicted RBP14.01□□□□□ -0.17
ZEB1-215ENST00000559476 RBM42Q9BTD8 480 aaKnown RBP13.96□□□□□ -0.17
ZEB1-215ENST00000559476 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
ZEB1-215ENST00000559476 POTEHQ6S545 545 aa13.67□□□□□ -0.22
ZEB1-215ENST00000559476 CSRNP3Q8WYN3 585 aa13.64□□□□□ -0.23
ZEB1-215ENST00000559476 AKT1S1Q96B36 256 aa13.63□□□□□ -0.23
ZEB1-215ENST00000559476 FBLN2P98095 1184 aa13.62□□□□□ -0.23
ZEB1-215ENST00000559476 OSCARQ8IYS5 282 aa13.6□□□□□ -0.23
ZEB1-215ENST00000559476 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
ZEB1-215ENST00000559476 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
ZEB1-215ENST00000559476 SPDYE2BA6NHP3 402 aa13.47□□□□□ -0.25
ZEB1-215ENST00000559476 SPDYE6P0CI01 402 aa13.47□□□□□ -0.25
ZEB1-215ENST00000559476 SPDYE2Q495Y8 402 aa13.47□□□□□ -0.25
ZEB1-215ENST00000559476 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
ZEB1-215ENST00000559476 MKRN4PQ13434 485 aaPredicted RBP13.4□□□□□ -0.26
ZEB1-215ENST00000559476 ZNF692Q9BU19 519 aaPredicted RBP13.28□□□□□ -0.28
ZEB1-215ENST00000559476 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
ZEB1-215ENST00000559476 SSUH2Q9Y2M2 353 aa13.26□□□□□ -0.29
ZEB1-215ENST00000559476 SPDYE1Q8NFV5 336 aaPredicted RBP13.2□□□□□ -0.3
ZEB1-215ENST00000559476 PIP4P2Q8N4L2 257 aa13.18□□□□□ -0.3
ZEB1-215ENST00000559476 FXR2P51116 673 aaKnown RBP eCLIP13.17□□□□□ -0.3
ZEB1-215ENST00000559476 CLEC11AQ9Y240 323 aa13.09□□□□□ -0.31
ZEB1-215ENST00000559476 PABPN1Q86U42 306 aaKnown RBP eCLIP13.07□□□□□ -0.32
ZEB1-215ENST00000559476 PRR29P0C7W0 189 aa12.94□□□□□ -0.34
ZEB1-215ENST00000559476 PRKAR2AP13861 404 aaKnown RBP12.94□□□□□ -0.34
ZEB1-215ENST00000559476 HAX1O00165 279 aa12.92□□□□□ -0.34
ZEB1-215ENST00000559476 SPDYE4A6NLX3 237 aa12.91□□□□□ -0.34
ZEB1-215ENST00000559476 SP7Q8TDD2 431 aaPredicted RBP12.9□□□□□ -0.34
ZEB1-215ENST00000559476 STAG3Q9UJ98 1225 aa12.86□□□□□ -0.35
ZEB1-215ENST00000559476 CHADLQ6NUI6 762 aa12.77□□□□□ -0.37
ZEB1-215ENST00000559476 C19orf67A6NJJ6 358 aa12.74□□□□□ -0.37
ZEB1-215ENST00000559476 FARP1Q9Y4F1 1045 aaPredicted RBP12.68□□□□□ -0.38
ZEB1-215ENST00000559476 EVX2Q03828 476 aa12.67□□□□□ -0.38
ZEB1-215ENST00000559476 PROM2Q8N271 834 aa12.64□□□□□ -0.39
ZEB1-215ENST00000559476 CREBZFQ9NS37 354 aa12.6□□□□□ -0.39
ZEB1-215ENST00000559476 CD44P16070 742 aaKnown RBP12.56□□□□□ -0.4
ZEB1-215ENST00000559476 CLCN6P51797 869 aa12.53□□□□□ -0.4
ZEB1-215ENST00000559476 NPM1P06748 294 aaKnown RBP eCLIP12.49□□□□□ -0.41
ZEB1-215ENST00000559476 GABBR2O75899 941 aa12.48□□□□□ -0.41
ZEB1-215ENST00000559476 PAK3O75914 559 aaPredicted RBP12.42□□□□□ -0.42
ZEB1-215ENST00000559476 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
ZEB1-215ENST00000559476 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
ZEB1-215ENST00000559476 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
ZEB1-215ENST00000559476 FKBP8Q14318 412 aa12.39□□□□□ -0.43
ZEB1-215ENST00000559476 ZRANB1Q9UGI0 708 aa12.39□□□□□ -0.43
ZEB1-215ENST00000559476 MIER1Q8N108 512 aa12.31□□□□□ -0.44
ZEB1-215ENST00000559476 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
ZEB1-215ENST00000559476 ZBTB47Q9UFB7 747 aaPredicted RBP12.24□□□□□ -0.45
ZEB1-215ENST00000559476 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
ZEB1-215ENST00000559476 FBXO3Q9UK99 471 aa12.22□□□□□ -0.45
ZEB1-215ENST00000559476 PHF12Q96QT6 1004 aa12.19□□□□□ -0.46
ZEB1-215ENST00000559476 POTEIP0CG38 1075 aa12.16□□□□□ -0.46
ZEB1-215ENST00000559476 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-215ENST00000559476 TSPYL2Q9H2G4 693 aaPredicted RBP12.15□□□□□ -0.46
ZEB1-215ENST00000559476 CCDC61Q9Y6R9 512 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms