RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 NISCHQ9Y2I1 1504 aa34.91■■■■□ 3.18
USP8-208ENST00000559329 CCDC180Q9P1Z9 1646 aa30.15■■■□□ 2.42
USP8-208ENST00000559329 ZCCHC6Q5VYS8 1495 aaKnown RBP29.47■■■□□ 2.31
USP8-208ENST00000559329 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
USP8-208ENST00000559329 DCAF1Q9Y4B6 1507 aa28.86■■■□□ 2.21
USP8-208ENST00000559329 DCAF8L2P0C7V8 631 aa28.55■■■□□ 2.16
USP8-208ENST00000559329 MYO15BQ96JP2 1530 aa28.3■■■□□ 2.12
USP8-208ENST00000559329 SUPT5HO00267 1087 aaKnown RBP28.03■■■□□ 2.08
USP8-208ENST00000559329 ABCC9O60706 1549 aa28■■■□□ 2.07
USP8-208ENST00000559329 NACADO15069 1562 aa27.93■■■□□ 2.06
USP8-208ENST00000559329 SCRIBQ14160 1630 aa27.84■■■□□ 2.05
USP8-208ENST00000559329 RB1CC1Q8TDY2 1594 aa27.54■■■□□ 2
USP8-208ENST00000559329 RSF1Q96T23 1441 aaPredicted RBP27.33■■□□□ 1.96
USP8-208ENST00000559329 CHIC1Q5VXU3 224 aa27.19■■□□□ 1.94
USP8-208ENST00000559329 CECR2Q9BXF3 1484 aa27.12■■□□□ 1.93
USP8-208ENST00000559329 UNC13AQ9UPW8 1703 aa27.09■■□□□ 1.93
USP8-208ENST00000559329 MROH2BQ7Z745 1585 aa27.02■■□□□ 1.92
USP8-208ENST00000559329 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
USP8-208ENST00000559329 WIZO95785 1651 aa26.83■■□□□ 1.89
USP8-208ENST00000559329 BICRAQ9NZM4 1560 aa26.8■■□□□ 1.88
USP8-208ENST00000559329 SMARCA4P51532 1647 aa26.72■■□□□ 1.87
USP8-208ENST00000559329 TOP2AP11388 1531 aaKnown RBP26.54■■□□□ 1.84
USP8-208ENST00000559329 PABPN1Q86U42 306 aaKnown RBP eCLIP26.52■■□□□ 1.84
USP8-208ENST00000559329 EIF4G1Q04637 1599 aaKnown RBP26.42■■□□□ 1.82
USP8-208ENST00000559329 PEG3Q9GZU2 1588 aa26.39■■□□□ 1.81
USP8-208ENST00000559329 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
USP8-208ENST00000559329 TRIM41Q8WV44 630 aa26.29■■□□□ 1.8
USP8-208ENST00000559329 CCDC88BA6NC98 1476 aa26.29■■□□□ 1.8
USP8-208ENST00000559329 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
USP8-208ENST00000559329 ATAD2BQ9ULI0 1458 aa26.14■■□□□ 1.77
USP8-208ENST00000559329 BAZ1BQ9UIG0 1483 aaKnown RBP25.99■■□□□ 1.75
USP8-208ENST00000559329 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
USP8-208ENST00000559329 FAM9AQ8IZU1 332 aaPredicted RBP25.85■■□□□ 1.73
USP8-208ENST00000559329 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
USP8-208ENST00000559329 NCAPD3P42695 1498 aa25.8■■□□□ 1.72
USP8-208ENST00000559329 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.7
USP8-208ENST00000559329 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
USP8-208ENST00000559329 SOGA1O94964 1423 aa25.58■■□□□ 1.69
USP8-208ENST00000559329 EEA1Q15075 1411 aa25.58■■□□□ 1.69
USP8-208ENST00000559329 PCGF6Q9BYE7 350 aa25.55■■□□□ 1.68
USP8-208ENST00000559329 EHMT2Q96KQ7 1210 aa25.47■■□□□ 1.67
USP8-208ENST00000559329 RUSC2Q8N2Y8 1516 aa25.46■■□□□ 1.67
USP8-208ENST00000559329 TOP2BQ02880 1626 aa25.42■■□□□ 1.66
USP8-208ENST00000559329 CFTRP13569 1480 aa25.4■■□□□ 1.66
USP8-208ENST00000559329 TRIM26Q12899 539 aaPredicted RBP25.39■■□□□ 1.65
USP8-208ENST00000559329 BIVM-ERCC5R4GMW8 1640 aa25.38■■□□□ 1.65
USP8-208ENST00000559329 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
USP8-208ENST00000559329 CC2D2AQ9P2K1 1620 aa25.37■■□□□ 1.65
USP8-208ENST00000559329 HRCP23327 699 aa25.32■■□□□ 1.64
USP8-208ENST00000559329 TNIKQ9UKE5 1360 aa25.31■■□□□ 1.64
USP8-208ENST00000559329 PRDM2Q13029 1718 aa25.3■■□□□ 1.64
USP8-208ENST00000559329 GOLGA3Q08378 1498 aa25.27■■□□□ 1.64
USP8-208ENST00000559329 KIF21BO75037 1637 aa25.26■■□□□ 1.63
USP8-208ENST00000559329 CEP162Q5TB80 1403 aa25.23■■□□□ 1.63
USP8-208ENST00000559329 CUX1P39880 1505 aa25.22■■□□□ 1.63
USP8-208ENST00000559329 CEP164Q9UPV0 1460 aa25.21■■□□□ 1.63
USP8-208ENST00000559329 CADPSQ9ULU8 1353 aa25.17■■□□□ 1.62
USP8-208ENST00000559329 UBTFP17480 764 aaKnown RBP25.07■■□□□ 1.6
USP8-208ENST00000559329 RAPGEF2Q9Y4G8 1499 aa25.03■■□□□ 1.6
USP8-208ENST00000559329 ERICH3Q5RHP9 1530 aa24.98■■□□□ 1.59
USP8-208ENST00000559329 PRXQ9BXM0 1461 aa24.98■■□□□ 1.59
USP8-208ENST00000559329 KIF27Q86VH2 1401 aa24.94■■□□□ 1.58
USP8-208ENST00000559329 FANCD2Q9BXW9 1451 aa24.9■■□□□ 1.58
USP8-208ENST00000559329 CLIP1P30622 1438 aa24.89■■□□□ 1.58
USP8-208ENST00000559329 PPARGC1BQ86YN6 1023 aaKnown RBP24.87■■□□□ 1.57
USP8-208ENST00000559329 FGD5Q6ZNL6 1462 aa24.84■■□□□ 1.57
USP8-208ENST00000559329 NESP48681 1621 aa24.8■■□□□ 1.56
USP8-208ENST00000559329 LAMC3Q9Y6N6 1575 aa24.8■■□□□ 1.56
USP8-208ENST00000559329 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
USP8-208ENST00000559329 VPS8Q8N3P4 1428 aa24.77■■□□□ 1.56
USP8-208ENST00000559329 CUX2O14529 1486 aa24.77■■□□□ 1.56
USP8-208ENST00000559329 TOPBP1Q92547 1522 aa24.71■■□□□ 1.55
USP8-208ENST00000559329 IGF1RP08069 1367 aa24.7■■□□□ 1.54
USP8-208ENST00000559329 POLA1P09884 1462 aaPredicted RBP24.64■■□□□ 1.54
USP8-208ENST00000559329 ZEB1P37275 1124 aaPredicted RBP24.63■■□□□ 1.53
USP8-208ENST00000559329 ABCA10Q8WWZ4 1543 aa24.63■■□□□ 1.53
USP8-208ENST00000559329 ARAP1Q96P48 1450 aa24.62■■□□□ 1.53
USP8-208ENST00000559329 DNAJC5BQ9UF47 199 aa24.61■■□□□ 1.53
USP8-208ENST00000559329 URB2Q14146 1524 aaKnown RBP24.59■■□□□ 1.53
USP8-208ENST00000559329 RAD54L2Q9Y4B4 1467 aa24.57■■□□□ 1.52
USP8-208ENST00000559329 PDS5BQ9NTI5 1447 aa24.57■■□□□ 1.52
USP8-208ENST00000559329 CARMIL1Q5VZK9 1371 aa24.55■■□□□ 1.52
USP8-208ENST00000559329 TTBK1Q5TCY1 1321 aaPredicted RBP24.54■■□□□ 1.52
USP8-208ENST00000559329 WDR97A6NE52 1622 aa24.53■■□□□ 1.52
USP8-208ENST00000559329 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
USP8-208ENST00000559329 ARHGAP35Q9NRY4 1499 aa24.5■■□□□ 1.51
USP8-208ENST00000559329 KIF21AQ7Z4S6 1674 aa24.5■■□□□ 1.51
USP8-208ENST00000559329 CUL7Q14999 1698 aa24.44■■□□□ 1.5
USP8-208ENST00000559329 ABCA5Q8WWZ7 1642 aa24.41■■□□□ 1.5
USP8-208ENST00000559329 APLP2Q06481 763 aa24.41■■□□□ 1.5
USP8-208ENST00000559329 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.33■■□□□ 1.49
USP8-208ENST00000559329 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
USP8-208ENST00000559329 GAPVD1Q14C86 1478 aa24.28■■□□□ 1.48
USP8-208ENST00000559329 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
USP8-208ENST00000559329 CTTNBP2Q8WZ74 1663 aa24.26■■□□□ 1.47
USP8-208ENST00000559329 TDRD9Q8NDG6 1382 aaKnown RBP24.25■■□□□ 1.47
USP8-208ENST00000559329 MRC2Q9UBG0 1479 aa24.25■■□□□ 1.47
USP8-208ENST00000559329 MAP3K1Q13233 1512 aa24.24■■□□□ 1.47
USP8-208ENST00000559329 KANK4Q5T7N3 995 aaPredicted RBP24.23■■□□□ 1.47
USP8-208ENST00000559329 EFCAB5A4FU69 1503 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms