RNA–Protein interactions for RNA: ENST00000559154.5

PSMA4-211, Transcript of proteasome subunit alpha 4, humanhuman

TSL 2

Gene PSMA4, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-211ENST00000559154 AEBP2Q6ZN18 517 aaPredicted RBP38.37■■■■□ 3.73
PSMA4-211ENST00000559154 CHIC1Q5VXU3 224 aa36.82■■■■□ 3.48
PSMA4-211ENST00000559154 SENP3Q9H4L4 574 aaPredicted RBP32.9■■■□□ 2.86
PSMA4-211ENST00000559154 PHF23Q9BUL5 403 aaPredicted RBP32.41■■■□□ 2.78
PSMA4-211ENST00000559154 FOXD1Q16676 465 aa30.48■■■□□ 2.47
PSMA4-211ENST00000559154 PLPPR3Q6T4P5 718 aa29.63■■■□□ 2.33
PSMA4-211ENST00000559154 PIAS4Q8N2W9 510 aaPredicted RBP28.64■■■□□ 2.18
PSMA4-211ENST00000559154 PPP6R1Q9UPN7 881 aa28.63■■■□□ 2.17
PSMA4-211ENST00000559154 MSH5O43196 834 aa28.6■■■□□ 2.17
PSMA4-211ENST00000559154 ADRA2BP18089 450 aa28.6■■■□□ 2.17
PSMA4-211ENST00000559154 POTEDQ86YR6 584 aa27.29■■□□□ 1.96
PSMA4-211ENST00000559154 SCAF1Q9H7N4 1312 aaKnown RBP26.4■■□□□ 1.82
PSMA4-211ENST00000559154 MAPK8IP2Q13387 824 aaPredicted RBP26.14■■□□□ 1.78
PSMA4-211ENST00000559154 DMRT2Q9Y5R5 561 aa26.07■■□□□ 1.76
PSMA4-211ENST00000559154 PPP4R3CPQ6ZMV5 832 aa25.93■■□□□ 1.74
PSMA4-211ENST00000559154 CNKSR2Q8WXI2 1034 aa25.45■■□□□ 1.66
PSMA4-211ENST00000559154 HOXD11P31277 338 aaPredicted RBP25.21■■□□□ 1.63
PSMA4-211ENST00000559154 NCBP3Q53F19 620 aaKnown RBP25.16■■□□□ 1.62
PSMA4-211ENST00000559154 RNF216Q9NWF9 866 aaPredicted RBP25.14■■□□□ 1.62
PSMA4-211ENST00000559154 DCAF8L1A6NGE4 600 aa25.02■■□□□ 1.6
PSMA4-211ENST00000559154 NPM3O75607 178 aaKnown RBP24.63■■□□□ 1.53
PSMA4-211ENST00000559154 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
PSMA4-211ENST00000559154 KCNA4P22459 653 aa24.37■■□□□ 1.49
PSMA4-211ENST00000559154 RNF39Q9H2S5 420 aa24.33■■□□□ 1.49
PSMA4-211ENST00000559154 CACNB1Q02641 598 aaPredicted RBP24.32■■□□□ 1.48
PSMA4-211ENST00000559154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.08■■□□□ 1.45
PSMA4-211ENST00000559154 C1QBPQ07021 282 aaKnown RBP24.07■■□□□ 1.44
PSMA4-211ENST00000559154 U3KPZ7 1027 aaPredicted RBP23.51■■□□□ 1.35
PSMA4-211ENST00000559154 SLC4A2P04920 1241 aa23.4■■□□□ 1.34
PSMA4-211ENST00000559154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.16■■□□□ 1.3
PSMA4-211ENST00000559154 APLP2Q06481 763 aa23.16■■□□□ 1.3
PSMA4-211ENST00000559154 HNRNPUL2Q1KMD3 747 aaKnown RBP23.16■■□□□ 1.3
PSMA4-211ENST00000559154 SLC4A1APQ9BWU0 796 aaKnown RBP23.15■■□□□ 1.3
PSMA4-211ENST00000559154 CAPN15O75808 1086 aa23.12■■□□□ 1.29
PSMA4-211ENST00000559154 SPINK5Q9NQ38 1064 aaPredicted RBP23.05■■□□□ 1.28
PSMA4-211ENST00000559154 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
PSMA4-211ENST00000559154 MYCNP04198 464 aaPredicted RBP22.89■■□□□ 1.25
PSMA4-211ENST00000559154 DSG3P32926 999 aa22.86■■□□□ 1.25
PSMA4-211ENST00000559154 ZNF219Q9P2Y4 722 aaPredicted RBP22.86■■□□□ 1.25
PSMA4-211ENST00000559154 TRHP20396 242 aaPredicted RBP22.79■■□□□ 1.24
PSMA4-211ENST00000559154 FOXD4L1Q9NU39 408 aa22.77■■□□□ 1.24
PSMA4-211ENST00000559154 ABCB7O75027 752 aa22.53■■□□□ 1.2
PSMA4-211ENST00000559154 ZBTB22O15209 634 aa22.33■■□□□ 1.17
PSMA4-211ENST00000559154 POLA2Q14181 598 aa22.22■■□□□ 1.15
PSMA4-211ENST00000559154 ATF5Q9Y2D1 282 aaPredicted RBP22.13■■□□□ 1.13
PSMA4-211ENST00000559154 ATXN8OSP0DMR3 200 aa22.09■■□□□ 1.13
PSMA4-211ENST00000559154 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
PSMA4-211ENST00000559154 ZBTB12Q9Y330 459 aaPredicted RBP21.97■■□□□ 1.11
PSMA4-211ENST00000559154 CSRNP3Q8WYN3 585 aa21.6■■□□□ 1.05
PSMA4-211ENST00000559154 EHMT2Q96KQ7 1210 aa21.51■■□□□ 1.03
PSMA4-211ENST00000559154 FBLN2P98095 1184 aa21.5■■□□□ 1.03
PSMA4-211ENST00000559154 POTEHQ6S545 545 aa21.5■■□□□ 1.03
PSMA4-211ENST00000559154 OSCARQ8IYS5 282 aa21.49■■□□□ 1.03
PSMA4-211ENST00000559154 AKT1S1Q96B36 256 aa21.46■■□□□ 1.03
PSMA4-211ENST00000559154 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
PSMA4-211ENST00000559154 SPDYE2BA6NHP3 402 aa21.24■□□□□ 0.99
PSMA4-211ENST00000559154 SPDYE6P0CI01 402 aa21.24■□□□□ 0.99
PSMA4-211ENST00000559154 SPDYE2Q495Y8 402 aa21.24■□□□□ 0.99
PSMA4-211ENST00000559154 REM2Q8IYK8 340 aaPredicted RBP21.18■□□□□ 0.98
PSMA4-211ENST00000559154 MKRN4PQ13434 485 aaPredicted RBP21.16■□□□□ 0.98
PSMA4-211ENST00000559154 ZNF692Q9BU19 519 aaPredicted RBP20.98■□□□□ 0.95
PSMA4-211ENST00000559154 PITPNM1O00562 1244 aa20.93■□□□□ 0.94
PSMA4-211ENST00000559154 SSUH2Q9Y2M2 353 aa20.91■□□□□ 0.94
PSMA4-211ENST00000559154 SPDYE1Q8NFV5 336 aaPredicted RBP20.81■□□□□ 0.92
PSMA4-211ENST00000559154 PIP4P2Q8N4L2 257 aa20.78■□□□□ 0.92
PSMA4-211ENST00000559154 FXR2P51116 673 aaKnown RBP eCLIP20.71■□□□□ 0.91
PSMA4-211ENST00000559154 CLEC11AQ9Y240 323 aa20.7■□□□□ 0.9
PSMA4-211ENST00000559154 PABPN1Q86U42 306 aaKnown RBP eCLIP20.65■□□□□ 0.9
PSMA4-211ENST00000559154 PRR29P0C7W0 189 aa20.43■□□□□ 0.86
PSMA4-211ENST00000559154 PRKAR2AP13861 404 aaKnown RBP20.43■□□□□ 0.86
PSMA4-211ENST00000559154 SPDYE4A6NLX3 237 aa20.42■□□□□ 0.86
PSMA4-211ENST00000559154 HAX1O00165 279 aa20.38■□□□□ 0.85
PSMA4-211ENST00000559154 SP7Q8TDD2 431 aaPredicted RBP20.3■□□□□ 0.84
PSMA4-211ENST00000559154 STAG3Q9UJ98 1225 aa20.28■□□□□ 0.84
PSMA4-211ENST00000559154 CHADLQ6NUI6 762 aa20.18■□□□□ 0.82
PSMA4-211ENST00000559154 C19orf67A6NJJ6 358 aa20.04■□□□□ 0.8
PSMA4-211ENST00000559154 FARP1Q9Y4F1 1045 aaPredicted RBP19.99■□□□□ 0.79
PSMA4-211ENST00000559154 EVX2Q03828 476 aa19.96■□□□□ 0.79
PSMA4-211ENST00000559154 PROM2Q8N271 834 aa19.92■□□□□ 0.78
PSMA4-211ENST00000559154 CREBZFQ9NS37 354 aa19.89■□□□□ 0.77
PSMA4-211ENST00000559154 CD44P16070 742 aaKnown RBP19.82■□□□□ 0.76
PSMA4-211ENST00000559154 NPM1P06748 294 aaKnown RBP eCLIP19.7■□□□□ 0.74
PSMA4-211ENST00000559154 GABBR2O75899 941 aa19.66■□□□□ 0.74
PSMA4-211ENST00000559154 CLCN6P51797 869 aa19.66■□□□□ 0.74
PSMA4-211ENST00000559154 FKBP8Q14318 412 aa19.65■□□□□ 0.74
PSMA4-211ENST00000559154 PAK3O75914 559 aaPredicted RBP19.61■□□□□ 0.73
PSMA4-211ENST00000559154 PLEKHG5O94827 1062 aa19.6■□□□□ 0.73
PSMA4-211ENST00000559154 ZRANB1Q9UGI0 708 aa19.57■□□□□ 0.72
PSMA4-211ENST00000559154 MNX1P50219 401 aaPredicted RBP19.55■□□□□ 0.72
PSMA4-211ENST00000559154 ZNF579Q8NAF0 562 aaKnown RBP19.54■□□□□ 0.72
PSMA4-211ENST00000559154 MIER1Q8N108 512 aa19.46■□□□□ 0.71
PSMA4-211ENST00000559154 PLCD3Q8N3E9 789 aa19.39■□□□□ 0.69
PSMA4-211ENST00000559154 ZBTB47Q9UFB7 747 aaPredicted RBP19.33■□□□□ 0.68
PSMA4-211ENST00000559154 FBXO3Q9UK99 471 aa19.31■□□□□ 0.68
PSMA4-211ENST00000559154 DCBLD2Q96PD2 775 aa19.3■□□□□ 0.68
PSMA4-211ENST00000559154 PHF12Q96QT6 1004 aa19.26■□□□□ 0.67
PSMA4-211ENST00000559154 TSPYL2Q9H2G4 693 aaPredicted RBP19.22■□□□□ 0.67
PSMA4-211ENST00000559154 GALR2O43603 387 aaPredicted RBP19.2■□□□□ 0.66
PSMA4-211ENST00000559154 POTEIP0CG38 1075 aa19.15■□□□□ 0.66
PSMA4-211ENST00000559154 CCDC61Q9Y6R9 512 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms