RNA–Protein interactions for RNA: ENST00000559004.5

ACAN-206, Transcript of aggrecan, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ACAN, Length 7,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAN-206ENST00000559004 DCAF8L2P0C7V8 631 aa18.73■□□□□ 0.59
ACAN-206ENST00000559004 PELP1Q8IZL8 1130 aaKnown RBP17.74■□□□□ 0.43
ACAN-206ENST00000559004 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
ACAN-206ENST00000559004 EHMT2Q96KQ7 1210 aa17.36■□□□□ 0.37
ACAN-206ENST00000559004 ERICH6Q7L0X2 663 aa17.29■□□□□ 0.36
ACAN-206ENST00000559004 SHROOM4Q9ULL8 1493 aa17.18■□□□□ 0.34
ACAN-206ENST00000559004 NISCHQ9Y2I1 1504 aa17.06■□□□□ 0.32
ACAN-206ENST00000559004 CCER1Q8TC90 406 aaPredicted RBP16.95■□□□□ 0.3
ACAN-206ENST00000559004 MYT1Q01538 1121 aa16.94■□□□□ 0.3
ACAN-206ENST00000559004 APLP2Q06481 763 aa16.85■□□□□ 0.29
ACAN-206ENST00000559004 TTBK1Q5TCY1 1321 aaPredicted RBP16.72■□□□□ 0.27
ACAN-206ENST00000559004 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
ACAN-206ENST00000559004 FAM9AQ8IZU1 332 aaPredicted RBP16.63■□□□□ 0.25
ACAN-206ENST00000559004 RANGAP1P46060 587 aaPredicted RBP16.57■□□□□ 0.24
ACAN-206ENST00000559004 CENPBP07199 599 aaPredicted RBP16.56■□□□□ 0.24
ACAN-206ENST00000559004 ATP1B4Q9UN42 357 aaPredicted RBP16.46■□□□□ 0.23
ACAN-206ENST00000559004 ZEB1P37275 1124 aaPredicted RBP16.43■□□□□ 0.22
ACAN-206ENST00000559004 NEFLP07196 543 aa16.43■□□□□ 0.22
ACAN-206ENST00000559004 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
ACAN-206ENST00000559004 YTHDC1Q96MU7 727 aaKnown RBP16.35■□□□□ 0.21
ACAN-206ENST00000559004 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
ACAN-206ENST00000559004 UBTFP17480 764 aaKnown RBP16.1■□□□□ 0.17
ACAN-206ENST00000559004 MYT1LQ9UL68 1186 aa15.95■□□□□ 0.14
ACAN-206ENST00000559004 PPARGC1BQ86YN6 1023 aaKnown RBP15.92■□□□□ 0.14
ACAN-206ENST00000559004 POLR3GLQ9BT43 218 aa15.92■□□□□ 0.14
ACAN-206ENST00000559004 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
ACAN-206ENST00000559004 CNGB1Q14028 1251 aaPredicted RBP15.88■□□□□ 0.13
ACAN-206ENST00000559004 TRIM26Q12899 539 aaPredicted RBP15.86■□□□□ 0.13
ACAN-206ENST00000559004 RTL5Q5HYW3 569 aaPredicted RBP15.86■□□□□ 0.13
ACAN-206ENST00000559004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
ACAN-206ENST00000559004 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
ACAN-206ENST00000559004 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
ACAN-206ENST00000559004 CLSPNQ9HAW4 1339 aa15.8■□□□□ 0.12
ACAN-206ENST00000559004 HRCP23327 699 aa15.75■□□□□ 0.11
ACAN-206ENST00000559004 ITGAEP38570 1179 aa15.73■□□□□ 0.11
ACAN-206ENST00000559004 SLC4A1APQ9BWU0 796 aaKnown RBP15.72■□□□□ 0.11
ACAN-206ENST00000559004 LOC105371045A0A1W2PR82 267 aa15.55■□□□□ 0.08
ACAN-206ENST00000559004 BCL11AQ9H165 835 aa15.51■□□□□ 0.07
ACAN-206ENST00000559004 DIEXFQ68CQ4 756 aaKnown RBP15.44■□□□□ 0.06
ACAN-206ENST00000559004 EIF5BO60841 1220 aaKnown RBP15.41■□□□□ 0.06
ACAN-206ENST00000559004 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
ACAN-206ENST00000559004 SLC24A1O60721 1099 aa15.37■□□□□ 0.05
ACAN-206ENST00000559004 BCANQ96GW7 911 aa15.31■□□□□ 0.04
ACAN-206ENST00000559004 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
ACAN-206ENST00000559004 GTF3C3Q9Y5Q9 886 aa15.19■□□□□ 0.02
ACAN-206ENST00000559004 TRIM52Q96A61 297 aa15.19■□□□□ 0.02
ACAN-206ENST00000559004 CDK11AQ9UQ88 783 aaPredicted RBP15.19■□□□□ 0.02
ACAN-206ENST00000559004 NEUROD1Q13562 356 aa15.18■□□□□ 0.02
ACAN-206ENST00000559004 PABPN1Q86U42 306 aaKnown RBP eCLIP15.15■□□□□ 0.02
ACAN-206ENST00000559004 FBLN2P98095 1184 aa15.14■□□□□ 0.01
ACAN-206ENST00000559004 GLIPR1L2Q4G1C9 344 aa15.14■□□□□ 0.01
ACAN-206ENST00000559004 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
ACAN-206ENST00000559004 ANP32BQ92688 251 aaKnown RBP15.13■□□□□ 0.01
ACAN-206ENST00000559004 ANP32CO43423 234 aa15.12■□□□□ 0.01
ACAN-206ENST00000559004 ZNF326Q5BKZ1 582 aaKnown RBP15.09■□□□□ 0.01
ACAN-206ENST00000559004 NPM2Q86SE8 214 aaKnown RBP15.08■□□□□ 0
ACAN-206ENST00000559004 ANP32AP39687 249 aaKnown RBP15.01□□□□□ -0.01
ACAN-206ENST00000559004 HSP90AA1P07900 732 aaKnown RBP15.01□□□□□ -0.01
ACAN-206ENST00000559004 ABCC9O60706 1549 aa15□□□□□ -0.01
ACAN-206ENST00000559004 ARXQ96QS3 562 aa14.98□□□□□ -0.01
ACAN-206ENST00000559004 ARID3CA6NKF2 412 aa14.97□□□□□ -0.01
ACAN-206ENST00000559004 PLPPR3Q6T4P5 718 aa14.93□□□□□ -0.02
ACAN-206ENST00000559004 ACIN1Q9UKV3 1341 aaKnown RBP14.91□□□□□ -0.02
ACAN-206ENST00000559004 NEFMP07197 916 aa14.9□□□□□ -0.02
ACAN-206ENST00000559004 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
ACAN-206ENST00000559004 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
ACAN-206ENST00000559004 NBR1Q14596 966 aa14.82□□□□□ -0.04
ACAN-206ENST00000559004 ZNF777Q9ULD5 760 aaPredicted RBP14.81□□□□□ -0.04
ACAN-206ENST00000559004 ESF1Q9H501 851 aaKnown RBP14.76□□□□□ -0.05
ACAN-206ENST00000559004 UPF2Q9HAU5 1272 aaKnown RBP14.75□□□□□ -0.05
ACAN-206ENST00000559004 FKBP8Q14318 412 aa14.74□□□□□ -0.05
ACAN-206ENST00000559004 CHGAP10645 457 aaKnown RBP14.71□□□□□ -0.06
ACAN-206ENST00000559004 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.06
ACAN-206ENST00000559004 TULP1O00294 542 aaPredicted RBP14.69□□□□□ -0.06
ACAN-206ENST00000559004 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
ACAN-206ENST00000559004 HNRNPUQ00839 825 aaKnown RBP eCLIP14.64□□□□□ -0.07
ACAN-206ENST00000559004 CSRNP3Q8WYN3 585 aa14.63□□□□□ -0.07
ACAN-206ENST00000559004 TONSLQ96HA7 1378 aa14.62□□□□□ -0.07
ACAN-206ENST00000559004 AMER1Q5JTC6 1135 aaPredicted RBP14.62□□□□□ -0.07
ACAN-206ENST00000559004 FAM9BQ8IZU0 186 aa14.6□□□□□ -0.07
ACAN-206ENST00000559004 SCAF1Q9H7N4 1312 aaKnown RBP14.58□□□□□ -0.08
ACAN-206ENST00000559004 DDX10Q13206 875 aaKnown RBP14.58□□□□□ -0.08
ACAN-206ENST00000559004 NCBP3Q53F19 620 aaKnown RBP14.57□□□□□ -0.08
ACAN-206ENST00000559004 SALL2Q9Y467 1007 aaPredicted RBP14.57□□□□□ -0.08
ACAN-206ENST00000559004 TRIM44Q96DX7 344 aaPredicted RBP14.56□□□□□ -0.08
ACAN-206ENST00000559004 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
ACAN-206ENST00000559004 A0A0G2JS52 829 aa14.54□□□□□ -0.08
ACAN-206ENST00000559004 TPRNQ4KMQ1 711 aa14.54□□□□□ -0.08
ACAN-206ENST00000559004 CCDC136Q96JN2 1154 aa14.54□□□□□ -0.08
ACAN-206ENST00000559004 PLEKHG5O94827 1062 aa14.52□□□□□ -0.08
ACAN-206ENST00000559004 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.08
ACAN-206ENST00000559004 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.52□□□□□ -0.09
ACAN-206ENST00000559004 DNTTIP2Q5QJE6 756 aaKnown RBP14.51□□□□□ -0.09
ACAN-206ENST00000559004 TMC1Q8TDI8 760 aa14.5□□□□□ -0.09
ACAN-206ENST00000559004 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
ACAN-206ENST00000559004 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.48□□□□□ -0.09
ACAN-206ENST00000559004 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
ACAN-206ENST00000559004 NCLP19338 710 aaKnown RBP14.45□□□□□ -0.1
ACAN-206ENST00000559004 ZBTB7CA1YPR0 619 aa14.44□□□□□ -0.1
ACAN-206ENST00000559004 WDR43Q15061 677 aaKnown RBP eCLIP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 123 ms