RNA–Protein interactions for RNA: ENST00000558734.1

SLTM-216, Transcript of SAFB like transcription modulator, humanhuman

TSL 5

Gene SLTM, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLTM-216ENST00000558734 AEBP2Q6ZN18 517 aaPredicted RBP22.3■■□□□ 1.16
SLTM-216ENST00000558734 CHIC1Q5VXU3 224 aa20.9■□□□□ 0.94
SLTM-216ENST00000558734 SENP3Q9H4L4 574 aaPredicted RBP19.26■□□□□ 0.67
SLTM-216ENST00000558734 PHF23Q9BUL5 403 aaPredicted RBP18.83■□□□□ 0.6
SLTM-216ENST00000558734 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
SLTM-216ENST00000558734 FOXD1Q16676 465 aa18.04■□□□□ 0.48
SLTM-216ENST00000558734 MSH5O43196 834 aa17.34■□□□□ 0.37
SLTM-216ENST00000558734 PIAS4Q8N2W9 510 aaPredicted RBP16.62■□□□□ 0.25
SLTM-216ENST00000558734 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
SLTM-216ENST00000558734 ADRA2BP18089 450 aa15.93■□□□□ 0.14
SLTM-216ENST00000558734 PLPPR3Q6T4P5 718 aa15.68■□□□□ 0.1
SLTM-216ENST00000558734 CACNB1Q02641 598 aaPredicted RBP15.52■□□□□ 0.08
SLTM-216ENST00000558734 DMRT2Q9Y5R5 561 aa15.09■□□□□ 0.01
SLTM-216ENST00000558734 MAPK8IP2Q13387 824 aaPredicted RBP14.94□□□□□ -0.02
SLTM-216ENST00000558734 RNF39Q9H2S5 420 aa14.66□□□□□ -0.06
SLTM-216ENST00000558734 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
SLTM-216ENST00000558734 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
SLTM-216ENST00000558734 POTEHQ6S545 545 aa14.45□□□□□ -0.1
SLTM-216ENST00000558734 C1QBPQ07021 282 aaKnown RBP14.42□□□□□ -0.1
SLTM-216ENST00000558734 HOXD11P31277 338 aaPredicted RBP14.11□□□□□ -0.15
SLTM-216ENST00000558734 DNAJC5BQ9UF47 199 aa13.87□□□□□ -0.19
SLTM-216ENST00000558734 RNF216Q9NWF9 866 aaPredicted RBP13.74□□□□□ -0.21
SLTM-216ENST00000558734 PPP4R3CPQ6ZMV5 832 aa13.59□□□□□ -0.23
SLTM-216ENST00000558734 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
SLTM-216ENST00000558734 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.47□□□□□ -0.253e-8■■■■■ 29.3
SLTM-216ENST00000558734 DSG3P32926 999 aa13.38□□□□□ -0.27
SLTM-216ENST00000558734 CAPN15O75808 1086 aa13.23□□□□□ -0.29
SLTM-216ENST00000558734 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
SLTM-216ENST00000558734 SP7Q8TDD2 431 aaPredicted RBP13.04□□□□□ -0.32
SLTM-216ENST00000558734 U3KPZ7 1027 aaPredicted RBP13.03□□□□□ -0.32
SLTM-216ENST00000558734 CHRDL2Q6WN34 429 aa12.94□□□□□ -0.34
SLTM-216ENST00000558734 RBM42Q9BTD8 480 aaKnown RBP12.84□□□□□ -0.35
SLTM-216ENST00000558734 ABCB7O75027 752 aa12.79□□□□□ -0.36
SLTM-216ENST00000558734 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
SLTM-216ENST00000558734 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
SLTM-216ENST00000558734 ZNF219Q9P2Y4 722 aaPredicted RBP12.7□□□□□ -0.38
SLTM-216ENST00000558734 APLP2Q06481 763 aa12.64□□□□□ -0.39
SLTM-216ENST00000558734 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
SLTM-216ENST00000558734 HAX1O00165 279 aa12.49□□□□□ -0.41
SLTM-216ENST00000558734 KCNA4P22459 653 aa12.42□□□□□ -0.42
SLTM-216ENST00000558734 PIP4P2Q8N4L2 257 aa12.39□□□□□ -0.43
SLTM-216ENST00000558734 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.36□□□□□ -0.43
SLTM-216ENST00000558734 HNRNPUL2Q1KMD3 747 aaKnown RBP12.36□□□□□ -0.43
SLTM-216ENST00000558734 PLSCR2Q9NRY7 297 aa12.35□□□□□ -0.43
SLTM-216ENST00000558734 AKT1S1Q96B36 256 aa12.3□□□□□ -0.44
SLTM-216ENST00000558734 SLC4A2P04920 1241 aa12.24□□□□□ -0.45
SLTM-216ENST00000558734 LHX8Q68G74 356 aa12.23□□□□□ -0.45
SLTM-216ENST00000558734 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
SLTM-216ENST00000558734 EVX2Q03828 476 aa12.19□□□□□ -0.46
SLTM-216ENST00000558734 REM2Q8IYK8 340 aaPredicted RBP12.17□□□□□ -0.46
SLTM-216ENST00000558734 FXR2P51116 673 aaKnown RBP eCLIP12.16□□□□□ -0.46
SLTM-216ENST00000558734 POLA2Q14181 598 aa12.16□□□□□ -0.46
SLTM-216ENST00000558734 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
SLTM-216ENST00000558734 GABBR2O75899 941 aa11.9□□□□□ -0.5
SLTM-216ENST00000558734 ZBTB12Q9Y330 459 aaPredicted RBP11.86□□□□□ -0.51
SLTM-216ENST00000558734 C19orf67A6NJJ6 358 aa11.8□□□□□ -0.52
SLTM-216ENST00000558734 OSCARQ8IYS5 282 aa11.8□□□□□ -0.52
SLTM-216ENST00000558734 PRKAR2AP13861 404 aaKnown RBP11.73□□□□□ -0.53
SLTM-216ENST00000558734 SLC4A1APQ9BWU0 796 aaKnown RBP11.67□□□□□ -0.54
SLTM-216ENST00000558734 MYCNP04198 464 aaPredicted RBP11.66□□□□□ -0.54
SLTM-216ENST00000558734 POTEIP0CG38 1075 aa11.61□□□□□ -0.55
SLTM-216ENST00000558734 POTEMA6NI47 508 aa11.57□□□□□ -0.56
SLTM-216ENST00000558734 ZBTB22O15209 634 aa11.52□□□□□ -0.57
SLTM-216ENST00000558734 POTEGQ6S5H5 508 aa11.49□□□□□ -0.57
SLTM-216ENST00000558734 CLEC11AQ9Y240 323 aa11.49□□□□□ -0.57
SLTM-216ENST00000558734 PCDH10Q9P2E7 1040 aa11.48□□□□□ -0.57
SLTM-216ENST00000558734 SPDYE1Q8NFV5 336 aaPredicted RBP11.47□□□□□ -0.57
SLTM-216ENST00000558734 ATF5Q9Y2D1 282 aaPredicted RBP11.41□□□□□ -0.58
SLTM-216ENST00000558734 SPDYE2BA6NHP3 402 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 SPDYE6P0CI01 402 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 CLCN6P51797 869 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 SPDYE2Q495Y8 402 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 OTUD5Q96G74 571 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 FOXD4L1Q9NU39 408 aa11.4□□□□□ -0.58
SLTM-216ENST00000558734 DCBLD2Q96PD2 775 aa11.39□□□□□ -0.59
SLTM-216ENST00000558734 CHADLQ6NUI6 762 aa11.35□□□□□ -0.59
SLTM-216ENST00000558734 CD44P16070 742 aaKnown RBP11.3□□□□□ -0.6
SLTM-216ENST00000558734 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
SLTM-216ENST00000558734 PRR29P0C7W0 189 aa11.16□□□□□ -0.62
SLTM-216ENST00000558734 CSRNP3Q8WYN3 585 aa11.14□□□□□ -0.63
SLTM-216ENST00000558734 FBLN2P98095 1184 aa11.12□□□□□ -0.63
SLTM-216ENST00000558734 FARP1Q9Y4F1 1045 aaPredicted RBP11.1□□□□□ -0.63
SLTM-216ENST00000558734 SSUH2Q9Y2M2 353 aa11.09□□□□□ -0.63
SLTM-216ENST00000558734 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
SLTM-216ENST00000558734 ZNF692Q9BU19 519 aaPredicted RBP11.08□□□□□ -0.64
SLTM-216ENST00000558734 EHMT2Q96KQ7 1210 aa11.03□□□□□ -0.64
SLTM-216ENST00000558734 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
SLTM-216ENST00000558734 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
SLTM-216ENST00000558734 GALR2O43603 387 aaPredicted RBP11□□□□□ -0.65
SLTM-216ENST00000558734 FAM163AQ96GL9 167 aaPredicted RBP10.98□□□□□ -0.65
SLTM-216ENST00000558734 ZRANB1Q9UGI0 708 aa10.98□□□□□ -0.65
SLTM-216ENST00000558734 MAMSTRQ6ZN01 415 aa10.92□□□□□ -0.66
SLTM-216ENST00000558734 PABPN1Q86U42 306 aaKnown RBP eCLIP10.88□□□□□ -0.67
SLTM-216ENST00000558734 CDAN1Q8IWY9 1227 aa10.87□□□□□ -0.67
SLTM-216ENST00000558734 PELP1Q8IZL8 1130 aaKnown RBP10.87□□□□□ -0.67
SLTM-216ENST00000558734 POTEJP0CG39 1038 aa10.85□□□□□ -0.67
SLTM-216ENST00000558734 MKRN4PQ13434 485 aaPredicted RBP10.84□□□□□ -0.67
SLTM-216ENST00000558734 METRNQ9UJH8 293 aa10.83□□□□□ -0.68
SLTM-216ENST00000558734 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
SLTM-216ENST00000558734 C7P10643 843 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms