RNA–Protein interactions for RNA: ENST00000558242.1

MYO5C-203, Transcript of myosin VC, humanhuman

TSL 2

Gene MYO5C, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYO5C-203ENST00000558242 AEBP2Q6ZN18 517 aaPredicted RBP31.02■■■□□ 2.56
MYO5C-203ENST00000558242 CHIC1Q5VXU3 224 aa29.77■■■□□ 2.36
MYO5C-203ENST00000558242 SENP3Q9H4L4 574 aaPredicted RBP26.26■■□□□ 1.79
MYO5C-203ENST00000558242 PHF23Q9BUL5 403 aaPredicted RBP26.21■■□□□ 1.79
MYO5C-203ENST00000558242 FOXD1Q16676 465 aa24.52■■□□□ 1.52
MYO5C-203ENST00000558242 PLPPR3Q6T4P5 718 aa23.92■■□□□ 1.42
MYO5C-203ENST00000558242 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
MYO5C-203ENST00000558242 ADRA2BP18089 450 aa23.21■■□□□ 1.31
MYO5C-203ENST00000558242 PIAS4Q8N2W9 510 aaPredicted RBP22.97■■□□□ 1.27
MYO5C-203ENST00000558242 MSH5O43196 834 aa22.68■■□□□ 1.22
MYO5C-203ENST00000558242 POTEDQ86YR6 584 aa21.56■■□□□ 1.04
MYO5C-203ENST00000558242 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
MYO5C-203ENST00000558242 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
MYO5C-203ENST00000558242 PPP4R3CPQ6ZMV5 832 aa21.07■□□□□ 0.96
MYO5C-203ENST00000558242 DMRT2Q9Y5R5 561 aa20.92■□□□□ 0.94
MYO5C-203ENST00000558242 CNKSR2Q8WXI2 1034 aa20.53■□□□□ 0.88
MYO5C-203ENST00000558242 HOXD11P31277 338 aaPredicted RBP20.31■□□□□ 0.84
MYO5C-203ENST00000558242 NCBP3Q53F19 620 aaKnown RBP20.28■□□□□ 0.84
MYO5C-203ENST00000558242 RNF216Q9NWF9 866 aaPredicted RBP20.25■□□□□ 0.83
MYO5C-203ENST00000558242 NPM3O75607 178 aaKnown RBP20.11■□□□□ 0.81
MYO5C-203ENST00000558242 KCNA4P22459 653 aa20.1■□□□□ 0.81
MYO5C-203ENST00000558242 DCAF8L1A6NGE4 600 aa20.05■□□□□ 0.8
MYO5C-203ENST00000558242 DNAJC5BQ9UF47 199 aa19.5■□□□□ 0.71
MYO5C-203ENST00000558242 RNF39Q9H2S5 420 aa19.45■□□□□ 0.7
MYO5C-203ENST00000558242 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.33■□□□□ 0.683e-7■■□□□ 13.1
MYO5C-203ENST00000558242 CACNB1Q02641 598 aaPredicted RBP19.26■□□□□ 0.67
MYO5C-203ENST00000558242 C1QBPQ07021 282 aaKnown RBP19.13■□□□□ 0.65
MYO5C-203ENST00000558242 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
MYO5C-203ENST00000558242 U3KPZ7 1027 aaPredicted RBP19.04■□□□□ 0.64
MYO5C-203ENST00000558242 SLC4A1APQ9BWU0 796 aaKnown RBP19■□□□□ 0.63
MYO5C-203ENST00000558242 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
MYO5C-203ENST00000558242 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
MYO5C-203ENST00000558242 CAPN15O75808 1086 aa18.55■□□□□ 0.56
MYO5C-203ENST00000558242 ZBTB22O15209 634 aa18.54■□□□□ 0.56
MYO5C-203ENST00000558242 MYCNP04198 464 aaPredicted RBP18.53■□□□□ 0.56
MYO5C-203ENST00000558242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
MYO5C-203ENST00000558242 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
MYO5C-203ENST00000558242 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
MYO5C-203ENST00000558242 APLP2Q06481 763 aa18.38■□□□□ 0.53
MYO5C-203ENST00000558242 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
MYO5C-203ENST00000558242 DSG3P32926 999 aa18.37■□□□□ 0.53
MYO5C-203ENST00000558242 ZNF219Q9P2Y4 722 aaPredicted RBP18.28■□□□□ 0.52
MYO5C-203ENST00000558242 ABCB7O75027 752 aa18.21■□□□□ 0.51
MYO5C-203ENST00000558242 ATF5Q9Y2D1 282 aaPredicted RBP18.19■□□□□ 0.5
MYO5C-203ENST00000558242 CSRNP3Q8WYN3 585 aa18.01■□□□□ 0.47
MYO5C-203ENST00000558242 EHMT2Q96KQ7 1210 aa18■□□□□ 0.47
MYO5C-203ENST00000558242 POLA2Q14181 598 aa17.95■□□□□ 0.46
MYO5C-203ENST00000558242 ATXN8OSP0DMR3 200 aa17.9■□□□□ 0.46
MYO5C-203ENST00000558242 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
MYO5C-203ENST00000558242 RBM42Q9BTD8 480 aaKnown RBP17.41■□□□□ 0.38
MYO5C-203ENST00000558242 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
MYO5C-203ENST00000558242 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
MYO5C-203ENST00000558242 FBLN2P98095 1184 aa17.29■□□□□ 0.36
MYO5C-203ENST00000558242 AKT1S1Q96B36 256 aa17.14■□□□□ 0.33
MYO5C-203ENST00000558242 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
MYO5C-203ENST00000558242 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
MYO5C-203ENST00000558242 SPDYE2Q495Y8 402 aa17.06■□□□□ 0.32
MYO5C-203ENST00000558242 REM2Q8IYK8 340 aaPredicted RBP17.02■□□□□ 0.32
MYO5C-203ENST00000558242 POTEHQ6S545 545 aa16.95■□□□□ 0.3
MYO5C-203ENST00000558242 ZNF692Q9BU19 519 aaPredicted RBP16.95■□□□□ 0.3
MYO5C-203ENST00000558242 CHRDL2Q6WN34 429 aa16.94■□□□□ 0.3
MYO5C-203ENST00000558242 SSUH2Q9Y2M2 353 aa16.93■□□□□ 0.3
MYO5C-203ENST00000558242 PITPNM1O00562 1244 aa16.86■□□□□ 0.29
MYO5C-203ENST00000558242 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
MYO5C-203ENST00000558242 SPDYE4A6NLX3 237 aa16.67■□□□□ 0.26
MYO5C-203ENST00000558242 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
MYO5C-203ENST00000558242 PIP4P2Q8N4L2 257 aa16.66■□□□□ 0.26
MYO5C-203ENST00000558242 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
MYO5C-203ENST00000558242 FXR2P51116 673 aaKnown RBP eCLIP16.61■□□□□ 0.25
MYO5C-203ENST00000558242 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
MYO5C-203ENST00000558242 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
MYO5C-203ENST00000558242 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
MYO5C-203ENST00000558242 PROM2Q8N271 834 aa16.34■□□□□ 0.21
MYO5C-203ENST00000558242 FKBP8Q14318 412 aa16.28■□□□□ 0.2
MYO5C-203ENST00000558242 STAG3Q9UJ98 1225 aa16.27■□□□□ 0.2
MYO5C-203ENST00000558242 HAX1O00165 279 aa16.21■□□□□ 0.19
MYO5C-203ENST00000558242 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
MYO5C-203ENST00000558242 EVX2Q03828 476 aa16.15■□□□□ 0.18
MYO5C-203ENST00000558242 FARP1Q9Y4F1 1045 aaPredicted RBP16.1■□□□□ 0.17
MYO5C-203ENST00000558242 C19orf67A6NJJ6 358 aa16.07■□□□□ 0.16
MYO5C-203ENST00000558242 SP7Q8TDD2 431 aaPredicted RBP16.06■□□□□ 0.16
MYO5C-203ENST00000558242 MNX1P50219 401 aaPredicted RBP15.95■□□□□ 0.14
MYO5C-203ENST00000558242 CD44P16070 742 aaKnown RBP15.9■□□□□ 0.14
MYO5C-203ENST00000558242 MIER1Q8N108 512 aa15.84■□□□□ 0.13
MYO5C-203ENST00000558242 NPM1P06748 294 aaKnown RBP eCLIP15.78■□□□□ 0.12
MYO5C-203ENST00000558242 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
MYO5C-203ENST00000558242 GABBR2O75899 941 aa15.74■□□□□ 0.11
MYO5C-203ENST00000558242 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
MYO5C-203ENST00000558242 FBXO3Q9UK99 471 aa15.71■□□□□ 0.11
MYO5C-203ENST00000558242 PLEKHG5O94827 1062 aa15.69■□□□□ 0.1
MYO5C-203ENST00000558242 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
MYO5C-203ENST00000558242 PAK3O75914 559 aaPredicted RBP15.62■□□□□ 0.09
MYO5C-203ENST00000558242 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
MYO5C-203ENST00000558242 VASPP50552 380 aaPredicted RBP15.6■□□□□ 0.09
MYO5C-203ENST00000558242 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
MYO5C-203ENST00000558242 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
MYO5C-203ENST00000558242 NUBP1P53384 320 aa15.53■□□□□ 0.08
MYO5C-203ENST00000558242 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
MYO5C-203ENST00000558242 GALR2O43603 387 aaPredicted RBP15.51■□□□□ 0.07
MYO5C-203ENST00000558242 CCDC61Q9Y6R9 512 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms