RNA–Protein interactions for RNA: ENST00000557998.5

RNF111-202, Transcript of ring finger protein 111, humanhuman

TSL 2 BASIC

Gene RNF111, Length 4,803 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111-202ENST00000557998 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
RNF111-202ENST00000557998 DCAF8L2P0C7V8 631 aa19.37■□□□□ 0.69
RNF111-202ENST00000557998 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
RNF111-202ENST00000557998 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
RNF111-202ENST00000557998 CCDC180Q9P1Z9 1646 aa18.58■□□□□ 0.56
RNF111-202ENST00000557998 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
RNF111-202ENST00000557998 ABCC9O60706 1549 aa17.93■□□□□ 0.46
RNF111-202ENST00000557998 DCAF1Q9Y4B6 1507 aa17.83■□□□□ 0.44
RNF111-202ENST00000557998 SCRIBQ14160 1630 aa17.59■□□□□ 0.41
RNF111-202ENST00000557998 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
RNF111-202ENST00000557998 NACADO15069 1562 aa17.47■□□□□ 0.39
RNF111-202ENST00000557998 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
RNF111-202ENST00000557998 MYO15BQ96JP2 1530 aa17.44■□□□□ 0.38
RNF111-202ENST00000557998 FAM9AQ8IZU1 332 aaPredicted RBP17.4■□□□□ 0.38
RNF111-202ENST00000557998 EHMT2Q96KQ7 1210 aa17.4■□□□□ 0.38
RNF111-202ENST00000557998 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
RNF111-202ENST00000557998 RSF1Q96T23 1441 aaPredicted RBP17.25■□□□□ 0.35
RNF111-202ENST00000557998 PABPN1Q86U42 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
RNF111-202ENST00000557998 PCGF6Q9BYE7 350 aa17.13■□□□□ 0.33
RNF111-202ENST00000557998 LOC105371045A0A1W2PR82 267 aa17.09■□□□□ 0.33
RNF111-202ENST00000557998 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
RNF111-202ENST00000557998 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
RNF111-202ENST00000557998 BAZ1AQ9NRL2 1556 aaPredicted RBP16.93■□□□□ 0.3
RNF111-202ENST00000557998 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
RNF111-202ENST00000557998 APLP2Q06481 763 aa16.86■□□□□ 0.29
RNF111-202ENST00000557998 TRIM26Q12899 539 aaPredicted RBP16.79■□□□□ 0.28
RNF111-202ENST00000557998 WIZO95785 1651 aa16.78■□□□□ 0.28
RNF111-202ENST00000557998 TTBK1Q5TCY1 1321 aaPredicted RBP16.77■□□□□ 0.28
RNF111-202ENST00000557998 RANGAP1P46060 587 aaPredicted RBP16.73■□□□□ 0.27
RNF111-202ENST00000557998 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
RNF111-202ENST00000557998 PPARGC1BQ86YN6 1023 aaKnown RBP16.66■□□□□ 0.26
RNF111-202ENST00000557998 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
RNF111-202ENST00000557998 HRCP23327 699 aa16.63■□□□□ 0.25
RNF111-202ENST00000557998 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
RNF111-202ENST00000557998 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
RNF111-202ENST00000557998 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
RNF111-202ENST00000557998 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
RNF111-202ENST00000557998 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.23
RNF111-202ENST00000557998 UNC13AQ9UPW8 1703 aa16.5■□□□□ 0.23
RNF111-202ENST00000557998 BICRAQ9NZM4 1560 aa16.49■□□□□ 0.23
RNF111-202ENST00000557998 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
RNF111-202ENST00000557998 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
RNF111-202ENST00000557998 ABCC8Q09428 1581 aa16.41■□□□□ 0.22
RNF111-202ENST00000557998 WRNQ14191 1432 aaPredicted RBP eCLIP16.4■□□□□ 0.22
RNF111-202ENST00000557998 ATP1B4Q9UN42 357 aaPredicted RBP16.38■□□□□ 0.21
RNF111-202ENST00000557998 EEA1Q15075 1411 aa16.32■□□□□ 0.2
RNF111-202ENST00000557998 SOGA1O94964 1423 aa16.3■□□□□ 0.2
RNF111-202ENST00000557998 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
RNF111-202ENST00000557998 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.18
RNF111-202ENST00000557998 EIF4G1Q04637 1599 aaKnown RBP16.2■□□□□ 0.18
RNF111-202ENST00000557998 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.19■□□□□ 0.18
RNF111-202ENST00000557998 CEP162Q5TB80 1403 aa16.18■□□□□ 0.18
RNF111-202ENST00000557998 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
RNF111-202ENST00000557998 NCAPD3P42695 1498 aa16.17■□□□□ 0.18
RNF111-202ENST00000557998 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
RNF111-202ENST00000557998 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
RNF111-202ENST00000557998 RUSC2Q8N2Y8 1516 aa16.11■□□□□ 0.17
RNF111-202ENST00000557998 ITGAEP38570 1179 aa16.08■□□□□ 0.17
RNF111-202ENST00000557998 CLIP1P30622 1438 aa16.07■□□□□ 0.16
RNF111-202ENST00000557998 HMGXB3Q12766 1538 aa16.05■□□□□ 0.16
RNF111-202ENST00000557998 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
RNF111-202ENST00000557998 CADPSQ9ULU8 1353 aa16.01■□□□□ 0.15
RNF111-202ENST00000557998 SYNJ1O43426 1573 aa16■□□□□ 0.15
RNF111-202ENST00000557998 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
RNF111-202ENST00000557998 CFTRP13569 1480 aa15.94■□□□□ 0.14
RNF111-202ENST00000557998 FAM50AQ14320 339 aaKnown RBP15.9■□□□□ 0.14
RNF111-202ENST00000557998 RAPGEF2Q9Y4G8 1499 aa15.9■□□□□ 0.14
RNF111-202ENST00000557998 CUX2O14529 1486 aa15.89■□□□□ 0.13
RNF111-202ENST00000557998 CC2D2AQ9P2K1 1620 aa15.88■□□□□ 0.13
RNF111-202ENST00000557998 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
RNF111-202ENST00000557998 TOP2BQ02880 1626 aa15.86■□□□□ 0.13
RNF111-202ENST00000557998 VPS8Q8N3P4 1428 aa15.82■□□□□ 0.12
RNF111-202ENST00000557998 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
RNF111-202ENST00000557998 CUX1P39880 1505 aa15.8■□□□□ 0.12
RNF111-202ENST00000557998 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
RNF111-202ENST00000557998 KIF21BO75037 1637 aa15.8■□□□□ 0.12
RNF111-202ENST00000557998 FBLN2P98095 1184 aa15.78■□□□□ 0.12
RNF111-202ENST00000557998 DIEXFQ68CQ4 756 aaKnown RBP15.77■□□□□ 0.12
RNF111-202ENST00000557998 PDS5BQ9NTI5 1447 aa15.74■□□□□ 0.11
RNF111-202ENST00000557998 FGD5Q6ZNL6 1462 aa15.74■□□□□ 0.11
RNF111-202ENST00000557998 IGF1RP08069 1367 aa15.7■□□□□ 0.1
RNF111-202ENST00000557998 PRXQ9BXM0 1461 aa15.7■□□□□ 0.1
RNF111-202ENST00000557998 BIVM-ERCC5R4GMW8 1640 aa15.69■□□□□ 0.1
RNF111-202ENST00000557998 NESP48681 1621 aa15.68■□□□□ 0.1
RNF111-202ENST00000557998 YTHDC1Q96MU7 727 aaKnown RBP15.68■□□□□ 0.1
RNF111-202ENST00000557998 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
RNF111-202ENST00000557998 ZNF316A6NFI3 1004 aaPredicted RBP15.66■□□□□ 0.1
RNF111-202ENST00000557998 ARID3CA6NKF2 412 aa15.65■□□□□ 0.1
RNF111-202ENST00000557998 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
RNF111-202ENST00000557998 RAD54L2Q9Y4B4 1467 aa15.63■□□□□ 0.09
RNF111-202ENST00000557998 NEUROD1Q13562 356 aa15.61■□□□□ 0.09
RNF111-202ENST00000557998 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
RNF111-202ENST00000557998 MTUS2Q5JR59 1369 aa15.61■□□□□ 0.09
RNF111-202ENST00000557998 FHAD1B1AJZ9 1412 aa15.61■□□□□ 0.09
RNF111-202ENST00000557998 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
RNF111-202ENST00000557998 CDK11AQ9UQ88 783 aaPredicted RBP15.6■□□□□ 0.09
RNF111-202ENST00000557998 TRIM52Q96A61 297 aa15.59■□□□□ 0.09
RNF111-202ENST00000557998 TOPBP1Q92547 1522 aa15.57■□□□□ 0.08
RNF111-202ENST00000557998 CHMP7Q8WUX9 453 aaPredicted RBP15.57■□□□□ 0.08
RNF111-202ENST00000557998 ERCC6Q03468 1493 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms