RNA–Protein interactions for RNA: ENST00000557540.6

ETFRF1-211, Transcript of electron transfer flavoprotein regulatory factor 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ETFRF1, Length 1,259 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ETFRF1-211ENST00000557540 AEBP2Q6ZN18 517 aaPredicted RBP32.7■■■□□ 2.83
ETFRF1-211ENST00000557540 CHIC1Q5VXU3 224 aa31.43■■■□□ 2.62
ETFRF1-211ENST00000557540 SENP3Q9H4L4 574 aaPredicted RBP27.76■■■□□ 2.03
ETFRF1-211ENST00000557540 PHF23Q9BUL5 403 aaPredicted RBP27.62■■■□□ 2.01
ETFRF1-211ENST00000557540 FOXD1Q16676 465 aa25.86■■□□□ 1.73
ETFRF1-211ENST00000557540 PLPPR3Q6T4P5 718 aa25.28■■□□□ 1.64
ETFRF1-211ENST00000557540 PPP6R1Q9UPN7 881 aa24.54■■□□□ 1.52
ETFRF1-211ENST00000557540 ADRA2BP18089 450 aa24.47■■□□□ 1.51
ETFRF1-211ENST00000557540 PIAS4Q8N2W9 510 aaPredicted RBP24.24■■□□□ 1.47
ETFRF1-211ENST00000557540 MSH5O43196 834 aa24■■□□□ 1.43
ETFRF1-211ENST00000557540 POTEDQ86YR6 584 aa22.75■■□□□ 1.23
ETFRF1-211ENST00000557540 MAPK8IP2Q13387 824 aaPredicted RBP22.37■■□□□ 1.17
ETFRF1-211ENST00000557540 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
ETFRF1-211ENST00000557540 PPP4R3CPQ6ZMV5 832 aa22.23■■□□□ 1.15
ETFRF1-211ENST00000557540 DMRT2Q9Y5R5 561 aa22.1■■□□□ 1.13
ETFRF1-211ENST00000557540 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
ETFRF1-211ENST00000557540 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
ETFRF1-211ENST00000557540 HOXD11P31277 338 aaPredicted RBP21.46■■□□□ 1.03
ETFRF1-211ENST00000557540 RNF216Q9NWF9 866 aaPredicted RBP21.4■■□□□ 1.02
ETFRF1-211ENST00000557540 NPM3O75607 178 aaKnown RBP21.2■□□□□ 0.98
ETFRF1-211ENST00000557540 KCNA4P22459 653 aa21.18■□□□□ 0.98
ETFRF1-211ENST00000557540 DCAF8L1A6NGE4 600 aa21.15■□□□□ 0.98
ETFRF1-211ENST00000557540 DNAJC5BQ9UF47 199 aa20.65■□□□□ 0.9
ETFRF1-211ENST00000557540 RNF39Q9H2S5 420 aa20.55■□□□□ 0.88
ETFRF1-211ENST00000557540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
ETFRF1-211ENST00000557540 CACNB1Q02641 598 aaPredicted RBP20.35■□□□□ 0.85
ETFRF1-211ENST00000557540 C1QBPQ07021 282 aaKnown RBP20.25■□□□□ 0.83
ETFRF1-211ENST00000557540 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
ETFRF1-211ENST00000557540 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
ETFRF1-211ENST00000557540 SLC4A1APQ9BWU0 796 aaKnown RBP20.05■□□□□ 0.8
ETFRF1-211ENST00000557540 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
ETFRF1-211ENST00000557540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 HNRNPUL2Q1KMD3 747 aaKnown RBP19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
ETFRF1-211ENST00000557540 CAPN15O75808 1086 aa19.57■□□□□ 0.72
ETFRF1-211ENST00000557540 MYCNP04198 464 aaPredicted RBP19.57■□□□□ 0.72
ETFRF1-211ENST00000557540 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.72
ETFRF1-211ENST00000557540 ZBTB22O15209 634 aa19.5■□□□□ 0.71
ETFRF1-211ENST00000557540 APLP2Q06481 763 aa19.49■□□□□ 0.71
ETFRF1-211ENST00000557540 DSG3P32926 999 aa19.39■□□□□ 0.69
ETFRF1-211ENST00000557540 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
ETFRF1-211ENST00000557540 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
ETFRF1-211ENST00000557540 ABCB7O75027 752 aa19.18■□□□□ 0.66
ETFRF1-211ENST00000557540 ATF5Q9Y2D1 282 aaPredicted RBP19.14■□□□□ 0.65
ETFRF1-211ENST00000557540 CSRNP3Q8WYN3 585 aa18.97■□□□□ 0.63
ETFRF1-211ENST00000557540 ATXN8OSP0DMR3 200 aa18.96■□□□□ 0.63
ETFRF1-211ENST00000557540 POLA2Q14181 598 aa18.96■□□□□ 0.63
ETFRF1-211ENST00000557540 EHMT2Q96KQ7 1210 aa18.92■□□□□ 0.62
ETFRF1-211ENST00000557540 ZBTB12Q9Y330 459 aaPredicted RBP18.56■□□□□ 0.56
ETFRF1-211ENST00000557540 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
ETFRF1-211ENST00000557540 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
ETFRF1-211ENST00000557540 FBLN2P98095 1184 aa18.3■□□□□ 0.52
ETFRF1-211ENST00000557540 MKRN4PQ13434 485 aaPredicted RBP18.27■□□□□ 0.52
ETFRF1-211ENST00000557540 AKT1S1Q96B36 256 aa18.13■□□□□ 0.49
ETFRF1-211ENST00000557540 SPDYE2BA6NHP3 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 SPDYE6P0CI01 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 SPDYE2Q495Y8 402 aa18.05■□□□□ 0.48
ETFRF1-211ENST00000557540 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
ETFRF1-211ENST00000557540 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
ETFRF1-211ENST00000557540 POTEHQ6S545 545 aa17.9■□□□□ 0.46
ETFRF1-211ENST00000557540 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
ETFRF1-211ENST00000557540 SSUH2Q9Y2M2 353 aa17.87■□□□□ 0.45
ETFRF1-211ENST00000557540 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
ETFRF1-211ENST00000557540 PABPN1Q86U42 306 aaKnown RBP eCLIP17.67■□□□□ 0.42
ETFRF1-211ENST00000557540 SPDYE1Q8NFV5 336 aaPredicted RBP17.63■□□□□ 0.41
ETFRF1-211ENST00000557540 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
ETFRF1-211ENST00000557540 PIP4P2Q8N4L2 257 aa17.58■□□□□ 0.4
ETFRF1-211ENST00000557540 CLEC11AQ9Y240 323 aa17.58■□□□□ 0.4
ETFRF1-211ENST00000557540 FXR2P51116 673 aaKnown RBP eCLIP17.55■□□□□ 0.4
ETFRF1-211ENST00000557540 PRR29P0C7W0 189 aa17.36■□□□□ 0.37
ETFRF1-211ENST00000557540 PRKAR2AP13861 404 aaKnown RBP17.32■□□□□ 0.36
ETFRF1-211ENST00000557540 PROM2Q8N271 834 aa17.25■□□□□ 0.35
ETFRF1-211ENST00000557540 STAG3Q9UJ98 1225 aa17.24■□□□□ 0.35
ETFRF1-211ENST00000557540 CHADLQ6NUI6 762 aa17.23■□□□□ 0.35
ETFRF1-211ENST00000557540 FKBP8Q14318 412 aa17.15■□□□□ 0.34
ETFRF1-211ENST00000557540 HAX1O00165 279 aa17.13■□□□□ 0.33
ETFRF1-211ENST00000557540 CREBZFQ9NS37 354 aa17.05■□□□□ 0.32
ETFRF1-211ENST00000557540 FARP1Q9Y4F1 1045 aaPredicted RBP17.01■□□□□ 0.31
ETFRF1-211ENST00000557540 EVX2Q03828 476 aa17■□□□□ 0.31
ETFRF1-211ENST00000557540 C19orf67A6NJJ6 358 aa16.97■□□□□ 0.31
ETFRF1-211ENST00000557540 SP7Q8TDD2 431 aaPredicted RBP16.97■□□□□ 0.31
ETFRF1-211ENST00000557540 MNX1P50219 401 aaPredicted RBP16.82■□□□□ 0.28
ETFRF1-211ENST00000557540 CD44P16070 742 aaKnown RBP16.78■□□□□ 0.28
ETFRF1-211ENST00000557540 MIER1Q8N108 512 aa16.74■□□□□ 0.27
ETFRF1-211ENST00000557540 NPM1P06748 294 aaKnown RBP eCLIP16.71■□□□□ 0.27
ETFRF1-211ENST00000557540 PLEKHG5O94827 1062 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
ETFRF1-211ENST00000557540 GABBR2O75899 941 aa16.62■□□□□ 0.25
ETFRF1-211ENST00000557540 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
ETFRF1-211ENST00000557540 ZNF579Q8NAF0 562 aaKnown RBP16.54■□□□□ 0.24
ETFRF1-211ENST00000557540 PAK3O75914 559 aaPredicted RBP16.53■□□□□ 0.24
ETFRF1-211ENST00000557540 CLCN6P51797 869 aa16.46■□□□□ 0.23
ETFRF1-211ENST00000557540 ZBTB47Q9UFB7 747 aaPredicted RBP16.46■□□□□ 0.23
ETFRF1-211ENST00000557540 VASPP50552 380 aaPredicted RBP16.45■□□□□ 0.22
ETFRF1-211ENST00000557540 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
ETFRF1-211ENST00000557540 PHF12Q96QT6 1004 aa16.44■□□□□ 0.22
ETFRF1-211ENST00000557540 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
ETFRF1-211ENST00000557540 NUBP1P53384 320 aa16.38■□□□□ 0.21
ETFRF1-211ENST00000557540 CCDC61Q9Y6R9 512 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 482.4 ms