RNA–Protein interactions for RNA: ENST00000557397.5

TIMM9-210, Transcript of translocase of inner mitochondrial membrane 9, humanhuman

TSL 4

Gene TIMM9, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM9-210ENST00000557397 AEBP2Q6ZN18 517 aaPredicted RBP28.91■■■□□ 2.22
TIMM9-210ENST00000557397 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
TIMM9-210ENST00000557397 SENP3Q9H4L4 574 aaPredicted RBP24.64■■□□□ 1.54
TIMM9-210ENST00000557397 PHF23Q9BUL5 403 aaPredicted RBP24.37■■□□□ 1.49
TIMM9-210ENST00000557397 FOXD1Q16676 465 aa22.95■■□□□ 1.26
TIMM9-210ENST00000557397 PLPPR3Q6T4P5 718 aa22.2■■□□□ 1.14
TIMM9-210ENST00000557397 PPP6R1Q9UPN7 881 aa21.63■■□□□ 1.05
TIMM9-210ENST00000557397 ADRA2BP18089 450 aa21.58■■□□□ 1.05
TIMM9-210ENST00000557397 PIAS4Q8N2W9 510 aaPredicted RBP21.48■■□□□ 1.03
TIMM9-210ENST00000557397 MSH5O43196 834 aa21.38■■□□□ 1.01
TIMM9-210ENST00000557397 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
TIMM9-210ENST00000557397 MAPK8IP2Q13387 824 aaPredicted RBP19.76■□□□□ 0.75
TIMM9-210ENST00000557397 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
TIMM9-210ENST00000557397 DMRT2Q9Y5R5 561 aa19.57■□□□□ 0.72
TIMM9-210ENST00000557397 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
TIMM9-210ENST00000557397 CNKSR2Q8WXI2 1034 aa19.09■□□□□ 0.65
TIMM9-210ENST00000557397 HOXD11P31277 338 aaPredicted RBP18.93■□□□□ 0.62
TIMM9-210ENST00000557397 RNF216Q9NWF9 866 aaPredicted RBP18.85■□□□□ 0.61
TIMM9-210ENST00000557397 NCBP3Q53F19 620 aaKnown RBP18.83■□□□□ 0.6
TIMM9-210ENST00000557397 DCAF8L1A6NGE4 600 aa18.78■□□□□ 0.6
TIMM9-210ENST00000557397 NPM3O75607 178 aaKnown RBP18.53■□□□□ 0.56
TIMM9-210ENST00000557397 KCNA4P22459 653 aa18.36■□□□□ 0.53
TIMM9-210ENST00000557397 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
TIMM9-210ENST00000557397 CACNB1Q02641 598 aaPredicted RBP18.25■□□□□ 0.51
TIMM9-210ENST00000557397 DNAJC5BQ9UF47 199 aa18.24■□□□□ 0.51
TIMM9-210ENST00000557397 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.07■□□□□ 0.483e-7■□□□□ 9.7
TIMM9-210ENST00000557397 C1QBPQ07021 282 aaKnown RBP18.02■□□□□ 0.48
TIMM9-210ENST00000557397 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
TIMM9-210ENST00000557397 SLC4A2P04920 1241 aa17.65■□□□□ 0.42
TIMM9-210ENST00000557397 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
TIMM9-210ENST00000557397 SPINK5Q9NQ38 1064 aaPredicted RBP17.37■□□□□ 0.37
TIMM9-210ENST00000557397 CAPN15O75808 1086 aa17.34■□□□□ 0.37
TIMM9-210ENST00000557397 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.26■□□□□ 0.35
TIMM9-210ENST00000557397 HNRNPUL2Q1KMD3 747 aaKnown RBP17.26■□□□□ 0.35
TIMM9-210ENST00000557397 APLP2Q06481 763 aa17.23■□□□□ 0.35
TIMM9-210ENST00000557397 DSG3P32926 999 aa17.18■□□□□ 0.34
TIMM9-210ENST00000557397 SAMD1Q6SPF0 538 aaPredicted RBP17.17■□□□□ 0.34
TIMM9-210ENST00000557397 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
TIMM9-210ENST00000557397 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
TIMM9-210ENST00000557397 ZNF219Q9P2Y4 722 aaPredicted RBP17.07■□□□□ 0.32
TIMM9-210ENST00000557397 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
TIMM9-210ENST00000557397 ABCB7O75027 752 aa16.95■□□□□ 0.3
TIMM9-210ENST00000557397 ZBTB22O15209 634 aa16.86■□□□□ 0.29
TIMM9-210ENST00000557397 ATF5Q9Y2D1 282 aaPredicted RBP16.73■□□□□ 0.27
TIMM9-210ENST00000557397 POLA2Q14181 598 aa16.71■□□□□ 0.27
TIMM9-210ENST00000557397 ATXN8OSP0DMR3 200 aa16.54■□□□□ 0.24
TIMM9-210ENST00000557397 RBM42Q9BTD8 480 aaKnown RBP16.39■□□□□ 0.21
TIMM9-210ENST00000557397 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
TIMM9-210ENST00000557397 CSRNP3Q8WYN3 585 aa16.31■□□□□ 0.2
TIMM9-210ENST00000557397 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
TIMM9-210ENST00000557397 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
TIMM9-210ENST00000557397 POTEHQ6S545 545 aa16.12■□□□□ 0.17
TIMM9-210ENST00000557397 FBLN2P98095 1184 aa16.08■□□□□ 0.16
TIMM9-210ENST00000557397 AKT1S1Q96B36 256 aa16.07■□□□□ 0.16
TIMM9-210ENST00000557397 MKRN4PQ13434 485 aaPredicted RBP15.96■□□□□ 0.15
TIMM9-210ENST00000557397 CHRDL2Q6WN34 429 aa15.94■□□□□ 0.14
TIMM9-210ENST00000557397 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
TIMM9-210ENST00000557397 SPDYE2BA6NHP3 402 aa15.89■□□□□ 0.13
TIMM9-210ENST00000557397 SPDYE6P0CI01 402 aa15.89■□□□□ 0.13
TIMM9-210ENST00000557397 SPDYE2Q495Y8 402 aa15.89■□□□□ 0.13
TIMM9-210ENST00000557397 ZNF692Q9BU19 519 aaPredicted RBP15.75■□□□□ 0.11
TIMM9-210ENST00000557397 PITPNM1O00562 1244 aa15.72■□□□□ 0.11
TIMM9-210ENST00000557397 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
TIMM9-210ENST00000557397 PIP4P2Q8N4L2 257 aa15.62■□□□□ 0.09
TIMM9-210ENST00000557397 FXR2P51116 673 aaKnown RBP eCLIP15.57■□□□□ 0.08
TIMM9-210ENST00000557397 SPDYE1Q8NFV5 336 aaPredicted RBP15.57■□□□□ 0.08
TIMM9-210ENST00000557397 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
TIMM9-210ENST00000557397 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
TIMM9-210ENST00000557397 PRKAR2AP13861 404 aaKnown RBP15.34■□□□□ 0.05
TIMM9-210ENST00000557397 SPDYE4A6NLX3 237 aa15.33■□□□□ 0.04
TIMM9-210ENST00000557397 PRR29P0C7W0 189 aa15.32■□□□□ 0.04
TIMM9-210ENST00000557397 HAX1O00165 279 aa15.31■□□□□ 0.04
TIMM9-210ENST00000557397 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
TIMM9-210ENST00000557397 CHADLQ6NUI6 762 aa15.2■□□□□ 0.02
TIMM9-210ENST00000557397 STAG3Q9UJ98 1225 aa15.15■□□□□ 0.02
TIMM9-210ENST00000557397 EVX2Q03828 476 aa15.11■□□□□ 0.01
TIMM9-210ENST00000557397 C19orf67A6NJJ6 358 aa15.06■□□□□ 0
TIMM9-210ENST00000557397 FARP1Q9Y4F1 1045 aaPredicted RBP15.01□□□□□ -0.01
TIMM9-210ENST00000557397 PROM2Q8N271 834 aa14.97□□□□□ -0.01
TIMM9-210ENST00000557397 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
TIMM9-210ENST00000557397 CD44P16070 742 aaKnown RBP14.85□□□□□ -0.03
TIMM9-210ENST00000557397 GABBR2O75899 941 aa14.79□□□□□ -0.04
TIMM9-210ENST00000557397 FKBP8Q14318 412 aa14.77□□□□□ -0.05
TIMM9-210ENST00000557397 NPM1P06748 294 aaKnown RBP eCLIP14.72□□□□□ -0.05
TIMM9-210ENST00000557397 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
TIMM9-210ENST00000557397 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
TIMM9-210ENST00000557397 CLCN6P51797 869 aa14.64□□□□□ -0.07
TIMM9-210ENST00000557397 MIER1Q8N108 512 aa14.63□□□□□ -0.07
TIMM9-210ENST00000557397 ZNF579Q8NAF0 562 aaKnown RBP14.63□□□□□ -0.07
TIMM9-210ENST00000557397 PAK3O75914 559 aaPredicted RBP14.62□□□□□ -0.07
TIMM9-210ENST00000557397 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
TIMM9-210ENST00000557397 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
TIMM9-210ENST00000557397 PHF12Q96QT6 1004 aa14.49□□□□□ -0.09
TIMM9-210ENST00000557397 POTEIP0CG38 1075 aa14.46□□□□□ -0.09
TIMM9-210ENST00000557397 TSPYL2Q9H2G4 693 aaPredicted RBP14.46□□□□□ -0.09
TIMM9-210ENST00000557397 DCBLD2Q96PD2 775 aa14.45□□□□□ -0.1
TIMM9-210ENST00000557397 GALR2O43603 387 aaPredicted RBP14.44□□□□□ -0.1
TIMM9-210ENST00000557397 FBXO3Q9UK99 471 aa14.43□□□□□ -0.1
TIMM9-210ENST00000557397 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
TIMM9-210ENST00000557397 RASEFQ8IZ41 740 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms