RNA–Protein interactions for RNA: ENST00000557267.1

KTN1-225, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-225ENST00000557267 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
KTN1-225ENST00000557267 CHIC1Q5VXU3 224 aa26.14■■□□□ 1.78
KTN1-225ENST00000557267 SENP3Q9H4L4 574 aaPredicted RBP23.19■■□□□ 1.3
KTN1-225ENST00000557267 PHF23Q9BUL5 403 aaPredicted RBP22.97■■□□□ 1.27
KTN1-225ENST00000557267 FOXD1Q16676 465 aa21.62■■□□□ 1.05
KTN1-225ENST00000557267 PLPPR3Q6T4P5 718 aa21■□□□□ 0.95
KTN1-225ENST00000557267 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
KTN1-225ENST00000557267 ADRA2BP18089 450 aa20.36■□□□□ 0.85
KTN1-225ENST00000557267 PIAS4Q8N2W9 510 aaPredicted RBP20.22■□□□□ 0.83
KTN1-225ENST00000557267 MSH5O43196 834 aa20.1■□□□□ 0.81
KTN1-225ENST00000557267 POTEDQ86YR6 584 aa19.2■□□□□ 0.66
KTN1-225ENST00000557267 MAPK8IP2Q13387 824 aaPredicted RBP18.64■□□□□ 0.57
KTN1-225ENST00000557267 SCAF1Q9H7N4 1312 aaKnown RBP18.62■□□□□ 0.57
KTN1-225ENST00000557267 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
KTN1-225ENST00000557267 PPP4R3CPQ6ZMV5 832 aa18.44■□□□□ 0.54
KTN1-225ENST00000557267 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
KTN1-225ENST00000557267 HOXD11P31277 338 aaPredicted RBP17.89■□□□□ 0.45
KTN1-225ENST00000557267 RNF216Q9NWF9 866 aaPredicted RBP17.82■□□□□ 0.44
KTN1-225ENST00000557267 NCBP3Q53F19 620 aaKnown RBP17.79■□□□□ 0.44
KTN1-225ENST00000557267 DCAF8L1A6NGE4 600 aa17.62■□□□□ 0.41
KTN1-225ENST00000557267 NPM3O75607 178 aaKnown RBP17.56■□□□□ 0.4
KTN1-225ENST00000557267 KCNA4P22459 653 aa17.44■□□□□ 0.38
KTN1-225ENST00000557267 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
KTN1-225ENST00000557267 RNF39Q9H2S5 420 aa17.2■□□□□ 0.34
KTN1-225ENST00000557267 CACNB1Q02641 598 aaPredicted RBP17.08■□□□□ 0.32
KTN1-225ENST00000557267 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.314e-9■■□□□ 13
KTN1-225ENST00000557267 C1QBPQ07021 282 aaKnown RBP16.96■□□□□ 0.31
KTN1-225ENST00000557267 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
KTN1-225ENST00000557267 U3KPZ7 1027 aaPredicted RBP16.69■□□□□ 0.26
KTN1-225ENST00000557267 SLC4A1APQ9BWU0 796 aaKnown RBP16.5■□□□□ 0.23
KTN1-225ENST00000557267 SPINK5Q9NQ38 1064 aaPredicted RBP16.38■□□□□ 0.21
KTN1-225ENST00000557267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.3■□□□□ 0.2
KTN1-225ENST00000557267 CAPN15O75808 1086 aa16.3■□□□□ 0.2
KTN1-225ENST00000557267 HNRNPUL2Q1KMD3 747 aaKnown RBP16.3■□□□□ 0.2
KTN1-225ENST00000557267 APLP2Q06481 763 aa16.22■□□□□ 0.19
KTN1-225ENST00000557267 SAMD1Q6SPF0 538 aaPredicted RBP16.22■□□□□ 0.19
KTN1-225ENST00000557267 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
KTN1-225ENST00000557267 DSG3P32926 999 aa16.2■□□□□ 0.18
KTN1-225ENST00000557267 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
KTN1-225ENST00000557267 TRHP20396 242 aaPredicted RBP16.11■□□□□ 0.17
KTN1-225ENST00000557267 ZNF219Q9P2Y4 722 aaPredicted RBP16.09■□□□□ 0.17
KTN1-225ENST00000557267 ZBTB22O15209 634 aa16.05■□□□□ 0.16
KTN1-225ENST00000557267 ABCB7O75027 752 aa15.94■□□□□ 0.14
KTN1-225ENST00000557267 ATF5Q9Y2D1 282 aaPredicted RBP15.86■□□□□ 0.13
KTN1-225ENST00000557267 POLA2Q14181 598 aa15.77■□□□□ 0.12
KTN1-225ENST00000557267 ATXN8OSP0DMR3 200 aa15.7■□□□□ 0.1
KTN1-225ENST00000557267 CSRNP3Q8WYN3 585 aa15.56■□□□□ 0.08
KTN1-225ENST00000557267 ZBTB12Q9Y330 459 aaPredicted RBP15.44■□□□□ 0.06
KTN1-225ENST00000557267 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
KTN1-225ENST00000557267 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
KTN1-225ENST00000557267 OSCARQ8IYS5 282 aa15.21■□□□□ 0.03
KTN1-225ENST00000557267 FBLN2P98095 1184 aa15.17■□□□□ 0.02
KTN1-225ENST00000557267 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
KTN1-225ENST00000557267 AKT1S1Q96B36 256 aa15.13■□□□□ 0.01
KTN1-225ENST00000557267 POTEHQ6S545 545 aa15.09■□□□□ 0.01
KTN1-225ENST00000557267 SPDYE2BA6NHP3 402 aa15□□□□□ -0.01
KTN1-225ENST00000557267 SPDYE6P0CI01 402 aa15□□□□□ -0.01
KTN1-225ENST00000557267 SPDYE2Q495Y8 402 aa15□□□□□ -0.01
KTN1-225ENST00000557267 REM2Q8IYK8 340 aaPredicted RBP15□□□□□ -0.01
KTN1-225ENST00000557267 CHRDL2Q6WN34 429 aa14.98□□□□□ -0.01
KTN1-225ENST00000557267 ZNF692Q9BU19 519 aaPredicted RBP14.87□□□□□ -0.03
KTN1-225ENST00000557267 SSUH2Q9Y2M2 353 aa14.84□□□□□ -0.03
KTN1-225ENST00000557267 PITPNM1O00562 1244 aa14.81□□□□□ -0.04
KTN1-225ENST00000557267 PIP4P2Q8N4L2 257 aa14.69□□□□□ -0.06
KTN1-225ENST00000557267 FXR2P51116 673 aaKnown RBP eCLIP14.67□□□□□ -0.065e-13■□□□□ 11.1
KTN1-225ENST00000557267 SPDYE1Q8NFV5 336 aaPredicted RBP14.67□□□□□ -0.06
KTN1-225ENST00000557267 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
KTN1-225ENST00000557267 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
KTN1-225ENST00000557267 SPDYE4A6NLX3 237 aa14.53□□□□□ -0.08
KTN1-225ENST00000557267 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
KTN1-225ENST00000557267 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
KTN1-225ENST00000557267 HAX1O00165 279 aa14.35□□□□□ -0.11
KTN1-225ENST00000557267 CHADLQ6NUI6 762 aa14.32□□□□□ -0.12
KTN1-225ENST00000557267 STAG3Q9UJ98 1225 aa14.31□□□□□ -0.12
KTN1-225ENST00000557267 PROM2Q8N271 834 aa14.26□□□□□ -0.13
KTN1-225ENST00000557267 SP7Q8TDD2 431 aaPredicted RBP14.26□□□□□ -0.13
KTN1-225ENST00000557267 EVX2Q03828 476 aa14.23□□□□□ -0.13
KTN1-225ENST00000557267 C19orf67A6NJJ6 358 aa14.18□□□□□ -0.14
KTN1-225ENST00000557267 FARP1Q9Y4F1 1045 aaPredicted RBP14.16□□□□□ -0.14
KTN1-225ENST00000557267 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
KTN1-225ENST00000557267 FKBP8Q14318 412 aa14.05□□□□□ -0.16
KTN1-225ENST00000557267 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
KTN1-225ENST00000557267 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
KTN1-225ENST00000557267 GABBR2O75899 941 aa13.9□□□□□ -0.18
KTN1-225ENST00000557267 NPM1P06748 294 aaKnown RBP eCLIP13.88□□□□□ -0.19
KTN1-225ENST00000557267 MIER1Q8N108 512 aa13.84□□□□□ -0.19
KTN1-225ENST00000557267 ZRANB1Q9UGI0 708 aa13.83□□□□□ -0.2
KTN1-225ENST00000557267 CLCN6P51797 869 aa13.79□□□□□ -0.2
KTN1-225ENST00000557267 ZNF579Q8NAF0 562 aaKnown RBP13.79□□□□□ -0.2
KTN1-225ENST00000557267 PLEKHG5O94827 1062 aa13.76□□□□□ -0.21
KTN1-225ENST00000557267 PAK3O75914 559 aaPredicted RBP13.74□□□□□ -0.21
KTN1-225ENST00000557267 PLCD3Q8N3E9 789 aa13.73□□□□□ -0.21
KTN1-225ENST00000557267 FBXO3Q9UK99 471 aa13.7□□□□□ -0.22
KTN1-225ENST00000557267 PHF12Q96QT6 1004 aa13.65□□□□□ -0.22
KTN1-225ENST00000557267 POTEIP0CG38 1075 aa13.63□□□□□ -0.23
KTN1-225ENST00000557267 TSPYL2Q9H2G4 693 aaPredicted RBP13.63□□□□□ -0.23
KTN1-225ENST00000557267 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
KTN1-225ENST00000557267 GALR2O43603 387 aaPredicted RBP13.61□□□□□ -0.23
KTN1-225ENST00000557267 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
KTN1-225ENST00000557267 CCDC61Q9Y6R9 512 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms