RNA–Protein interactions for RNA: ENST00000556708.1

AC091078.3-201, humanhuman

TSL 2 BASIC

Gene AC091078.3, Length 2,284 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC091078.3-201ENST00000556708 NISCHQ9Y2I1 1504 aa24.21■■□□□ 1.47
AC091078.3-201ENST00000556708 CCDC180Q9P1Z9 1646 aa20.89■□□□□ 0.93
AC091078.3-201ENST00000556708 ZCCHC6Q5VYS8 1495 aaKnown RBP20.35■□□□□ 0.85
AC091078.3-201ENST00000556708 DCAF8L2P0C7V8 631 aa20.15■□□□□ 0.82
AC091078.3-201ENST00000556708 SHROOM4Q9ULL8 1493 aa20.11■□□□□ 0.81
AC091078.3-201ENST00000556708 DCAF1Q9Y4B6 1507 aa19.87■□□□□ 0.77
AC091078.3-201ENST00000556708 ABCC9O60706 1549 aa19.86■□□□□ 0.77
AC091078.3-201ENST00000556708 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
AC091078.3-201ENST00000556708 NACADO15069 1562 aa19.44■□□□□ 0.7
AC091078.3-201ENST00000556708 SCRIBQ14160 1630 aa19.44■□□□□ 0.7
AC091078.3-201ENST00000556708 SUPT5HO00267 1087 aaKnown RBP19.4■□□□□ 0.7
AC091078.3-201ENST00000556708 RB1CC1Q8TDY2 1594 aa19.25■□□□□ 0.67
AC091078.3-201ENST00000556708 UNC13AQ9UPW8 1703 aa19.04■□□□□ 0.64
AC091078.3-201ENST00000556708 CECR2Q9BXF3 1484 aa18.94■□□□□ 0.62
AC091078.3-201ENST00000556708 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
AC091078.3-201ENST00000556708 PABPN1Q86U42 306 aaKnown RBP eCLIP18.85■□□□□ 0.61
AC091078.3-201ENST00000556708 BICRAQ9NZM4 1560 aa18.81■□□□□ 0.6
AC091078.3-201ENST00000556708 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
AC091078.3-201ENST00000556708 WIZO95785 1651 aa18.67■□□□□ 0.58
AC091078.3-201ENST00000556708 CHIC1Q5VXU3 224 aa18.61■□□□□ 0.57
AC091078.3-201ENST00000556708 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
AC091078.3-201ENST00000556708 SMARCA4P51532 1647 aa18.57■□□□□ 0.56
AC091078.3-201ENST00000556708 TOP2AP11388 1531 aaKnown RBP18.34■□□□□ 0.53
AC091078.3-201ENST00000556708 CCDC88BA6NC98 1476 aa18.26■□□□□ 0.51
AC091078.3-201ENST00000556708 PEG3Q9GZU2 1588 aa18.26■□□□□ 0.51
AC091078.3-201ENST00000556708 ATAD2BQ9ULI0 1458 aa18.24■□□□□ 0.51
AC091078.3-201ENST00000556708 SMARCA2P51531 1590 aa18.24■□□□□ 0.51
AC091078.3-201ENST00000556708 EIF4G1Q04637 1599 aaKnown RBP18.18■□□□□ 0.5
AC091078.3-201ENST00000556708 BAZ1BQ9UIG0 1483 aaKnown RBP18.11■□□□□ 0.49
AC091078.3-201ENST00000556708 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
AC091078.3-201ENST00000556708 LOC105371045A0A1W2PR82 267 aa18.04■□□□□ 0.48
AC091078.3-201ENST00000556708 ABCC8Q09428 1581 aa18■□□□□ 0.47
AC091078.3-201ENST00000556708 NCAPD3P42695 1498 aa18■□□□□ 0.47
AC091078.3-201ENST00000556708 FAM9AQ8IZU1 332 aaPredicted RBP17.95■□□□□ 0.46
AC091078.3-201ENST00000556708 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
AC091078.3-201ENST00000556708 CC2D2AQ9P2K1 1620 aa17.91■□□□□ 0.46
AC091078.3-201ENST00000556708 EHMT2Q96KQ7 1210 aa17.81■□□□□ 0.44
AC091078.3-201ENST00000556708 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
AC091078.3-201ENST00000556708 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
AC091078.3-201ENST00000556708 SOGA1O94964 1423 aa17.7■□□□□ 0.42
AC091078.3-201ENST00000556708 DNAJC5BQ9UF47 199 aa17.7■□□□□ 0.42
AC091078.3-201ENST00000556708 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
AC091078.3-201ENST00000556708 CFTRP13569 1480 aa17.67■□□□□ 0.42
AC091078.3-201ENST00000556708 CADPSQ9ULU8 1353 aa17.59■□□□□ 0.41
AC091078.3-201ENST00000556708 TOP2BQ02880 1626 aa17.55■□□□□ 0.4
AC091078.3-201ENST00000556708 CUX1P39880 1505 aa17.54■□□□□ 0.4
AC091078.3-201ENST00000556708 NESP48681 1621 aa17.53■□□□□ 0.4
AC091078.3-201ENST00000556708 PRDM2Q13029 1718 aa17.53■□□□□ 0.4
AC091078.3-201ENST00000556708 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
AC091078.3-201ENST00000556708 CSRNP3Q8WYN3 585 aa17.51■□□□□ 0.39
AC091078.3-201ENST00000556708 EEA1Q15075 1411 aa17.43■□□□□ 0.38
AC091078.3-201ENST00000556708 FANCD2Q9BXW9 1451 aa17.41■□□□□ 0.38
AC091078.3-201ENST00000556708 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.37
AC091078.3-201ENST00000556708 LAMC3Q9Y6N6 1575 aa17.32■□□□□ 0.36
AC091078.3-201ENST00000556708 PCGF6Q9BYE7 350 aa17.31■□□□□ 0.36
AC091078.3-201ENST00000556708 TNIKQ9UKE5 1360 aa17.31■□□□□ 0.36
AC091078.3-201ENST00000556708 FGD5Q6ZNL6 1462 aa17.3■□□□□ 0.36
AC091078.3-201ENST00000556708 GOLGA3Q08378 1498 aa17.29■□□□□ 0.36
AC091078.3-201ENST00000556708 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
AC091078.3-201ENST00000556708 KIF21BO75037 1637 aa17.28■□□□□ 0.36
AC091078.3-201ENST00000556708 CEP164Q9UPV0 1460 aa17.27■□□□□ 0.35
AC091078.3-201ENST00000556708 CEP162Q5TB80 1403 aa17.26■□□□□ 0.35
AC091078.3-201ENST00000556708 TOPBP1Q92547 1522 aa17.25■□□□□ 0.35
AC091078.3-201ENST00000556708 PPARGC1BQ86YN6 1023 aaKnown RBP17.24■□□□□ 0.35
AC091078.3-201ENST00000556708 KIF21AQ7Z4S6 1674 aa17.24■□□□□ 0.35
AC091078.3-201ENST00000556708 KIF27Q86VH2 1401 aa17.23■□□□□ 0.35
AC091078.3-201ENST00000556708 URB2Q14146 1524 aaKnown RBP17.23■□□□□ 0.35
AC091078.3-201ENST00000556708 RAD54L2Q9Y4B4 1467 aa17.23■□□□□ 0.35
AC091078.3-201ENST00000556708 DNMBPQ6XZF7 1577 aa17.23■□□□□ 0.35
AC091078.3-201ENST00000556708 CUX2O14529 1486 aa17.22■□□□□ 0.35
AC091078.3-201ENST00000556708 PRXQ9BXM0 1461 aa17.2■□□□□ 0.34
AC091078.3-201ENST00000556708 PDS5BQ9NTI5 1447 aa17.19■□□□□ 0.34
AC091078.3-201ENST00000556708 POLA1P09884 1462 aaPredicted RBP17.19■□□□□ 0.34
AC091078.3-201ENST00000556708 RANGAP1P46060 587 aaPredicted RBP17.17■□□□□ 0.34
AC091078.3-201ENST00000556708 IGF1RP08069 1367 aa17.16■□□□□ 0.34
AC091078.3-201ENST00000556708 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
AC091078.3-201ENST00000556708 ERICH3Q5RHP9 1530 aa17.1■□□□□ 0.33
AC091078.3-201ENST00000556708 ABCA10Q8WWZ4 1543 aa17.09■□□□□ 0.33
AC091078.3-201ENST00000556708 CLIP1P30622 1438 aa17.07■□□□□ 0.32
AC091078.3-201ENST00000556708 CARMIL1Q5VZK9 1371 aa17.05■□□□□ 0.32
AC091078.3-201ENST00000556708 TTBK1Q5TCY1 1321 aaPredicted RBP17.04■□□□□ 0.32
AC091078.3-201ENST00000556708 TDRD9Q8NDG6 1382 aaKnown RBP17.04■□□□□ 0.32
AC091078.3-201ENST00000556708 WDR97A6NE52 1622 aa17.03■□□□□ 0.32
AC091078.3-201ENST00000556708 HRCP23327 699 aa17■□□□□ 0.31
AC091078.3-201ENST00000556708 MRC2Q9UBG0 1479 aa16.99■□□□□ 0.31
AC091078.3-201ENST00000556708 TARBP1Q13395 1621 aaKnown RBP16.98■□□□□ 0.31
AC091078.3-201ENST00000556708 ABCA5Q8WWZ7 1642 aa16.95■□□□□ 0.3
AC091078.3-201ENST00000556708 ARAP1Q96P48 1450 aa16.93■□□□□ 0.3
AC091078.3-201ENST00000556708 GAPVD1Q14C86 1478 aa16.93■□□□□ 0.3
AC091078.3-201ENST00000556708 VPS8Q8N3P4 1428 aa16.92■□□□□ 0.3
AC091078.3-201ENST00000556708 AQRO60306 1485 aaKnown RBP eCLIP16.9■□□□□ 0.3
AC091078.3-201ENST00000556708 ERCC6Q03468 1493 aa16.9■□□□□ 0.3
AC091078.3-201ENST00000556708 ARHGAP35Q9NRY4 1499 aa16.9■□□□□ 0.3
AC091078.3-201ENST00000556708 WDR62O43379 1518 aa16.89■□□□□ 0.29
AC091078.3-201ENST00000556708 ZNF608Q9ULD9 1512 aaPredicted RBP16.86■□□□□ 0.29
AC091078.3-201ENST00000556708 CUL7Q14999 1698 aa16.86■□□□□ 0.29
AC091078.3-201ENST00000556708 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
AC091078.3-201ENST00000556708 P3H3Q8IVL6 736 aa16.82■□□□□ 0.28
AC091078.3-201ENST00000556708 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
AC091078.3-201ENST00000556708 IFT140Q96RY7 1462 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 687.2 ms