RNA–Protein interactions for RNA: ENST00000555175.1

PSMC6-209, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-209ENST00000555175 AEBP2Q6ZN18 517 aaPredicted RBP30.17■■■□□ 2.42
PSMC6-209ENST00000555175 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
PSMC6-209ENST00000555175 SENP3Q9H4L4 574 aaPredicted RBP25.67■■□□□ 1.7
PSMC6-209ENST00000555175 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
PSMC6-209ENST00000555175 FOXD1Q16676 465 aa23.9■■□□□ 1.42
PSMC6-209ENST00000555175 PLPPR3Q6T4P5 718 aa23.15■■□□□ 1.3
PSMC6-209ENST00000555175 PPP6R1Q9UPN7 881 aa22.53■■□□□ 1.2
PSMC6-209ENST00000555175 ADRA2BP18089 450 aa22.45■■□□□ 1.18
PSMC6-209ENST00000555175 PIAS4Q8N2W9 510 aaPredicted RBP22.38■■□□□ 1.17
PSMC6-209ENST00000555175 MSH5O43196 834 aa22.28■■□□□ 1.16
PSMC6-209ENST00000555175 POTEDQ86YR6 584 aa21.35■■□□□ 1.01
PSMC6-209ENST00000555175 MAPK8IP2Q13387 824 aaPredicted RBP20.55■□□□□ 0.88
PSMC6-209ENST00000555175 SCAF1Q9H7N4 1312 aaKnown RBP20.53■□□□□ 0.88
PSMC6-209ENST00000555175 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
PSMC6-209ENST00000555175 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
PSMC6-209ENST00000555175 CNKSR2Q8WXI2 1034 aa19.89■□□□□ 0.77
PSMC6-209ENST00000555175 HOXD11P31277 338 aaPredicted RBP19.76■□□□□ 0.75
PSMC6-209ENST00000555175 RNF216Q9NWF9 866 aaPredicted RBP19.66■□□□□ 0.74
PSMC6-209ENST00000555175 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
PSMC6-209ENST00000555175 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
PSMC6-209ENST00000555175 NPM3O75607 178 aaKnown RBP19.34■□□□□ 0.69
PSMC6-209ENST00000555175 KCNA4P22459 653 aa19.17■□□□□ 0.66
PSMC6-209ENST00000555175 RNF39Q9H2S5 420 aa19.05■□□□□ 0.64
PSMC6-209ENST00000555175 DNAJC5BQ9UF47 199 aa19.05■□□□□ 0.64
PSMC6-209ENST00000555175 CACNB1Q02641 598 aaPredicted RBP18.94■□□□□ 0.62
PSMC6-209ENST00000555175 C1QBPQ07021 282 aaKnown RBP18.76■□□□□ 0.59
PSMC6-209ENST00000555175 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.59
PSMC6-209ENST00000555175 U3KPZ7 1027 aaPredicted RBP18.45■□□□□ 0.54
PSMC6-209ENST00000555175 SLC4A2P04920 1241 aa18.42■□□□□ 0.54
PSMC6-209ENST00000555175 SLC4A1APQ9BWU0 796 aaKnown RBP18.13■□□□□ 0.49
PSMC6-209ENST00000555175 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
PSMC6-209ENST00000555175 CAPN15O75808 1086 aa18.02■□□□□ 0.48
PSMC6-209ENST00000555175 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
PSMC6-209ENST00000555175 HNRNPUL2Q1KMD3 747 aaKnown RBP17.98■□□□□ 0.47
PSMC6-209ENST00000555175 APLP2Q06481 763 aa17.93■□□□□ 0.46
PSMC6-209ENST00000555175 DSG3P32926 999 aa17.9■□□□□ 0.46
PSMC6-209ENST00000555175 SAMD1Q6SPF0 538 aaPredicted RBP17.89■□□□□ 0.45
PSMC6-209ENST00000555175 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
PSMC6-209ENST00000555175 FOXD4L1Q9NU39 408 aa17.82■□□□□ 0.44
PSMC6-209ENST00000555175 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
PSMC6-209ENST00000555175 TRHP20396 242 aaPredicted RBP17.79■□□□□ 0.44
PSMC6-209ENST00000555175 ZBTB22O15209 634 aa17.66■□□□□ 0.42
PSMC6-209ENST00000555175 ABCB7O75027 752 aa17.64■□□□□ 0.41
PSMC6-209ENST00000555175 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
PSMC6-209ENST00000555175 POLA2Q14181 598 aa17.38■□□□□ 0.37
PSMC6-209ENST00000555175 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
PSMC6-209ENST00000555175 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
PSMC6-209ENST00000555175 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
PSMC6-209ENST00000555175 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
PSMC6-209ENST00000555175 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
PSMC6-209ENST00000555175 OSCARQ8IYS5 282 aa16.84■□□□□ 0.29
PSMC6-209ENST00000555175 POTEHQ6S545 545 aa16.77■□□□□ 0.28
PSMC6-209ENST00000555175 FBLN2P98095 1184 aa16.72■□□□□ 0.27
PSMC6-209ENST00000555175 AKT1S1Q96B36 256 aa16.72■□□□□ 0.27
PSMC6-209ENST00000555175 MKRN4PQ13434 485 aaPredicted RBP16.68■□□□□ 0.26
PSMC6-209ENST00000555175 CHRDL2Q6WN34 429 aa16.6■□□□□ 0.25
PSMC6-209ENST00000555175 SPDYE2BA6NHP3 402 aa16.56■□□□□ 0.24
PSMC6-209ENST00000555175 SPDYE6P0CI01 402 aa16.56■□□□□ 0.24
PSMC6-209ENST00000555175 SPDYE2Q495Y8 402 aa16.56■□□□□ 0.24
PSMC6-209ENST00000555175 REM2Q8IYK8 340 aaPredicted RBP16.56■□□□□ 0.24
PSMC6-209ENST00000555175 PITPNM1O00562 1244 aa16.4■□□□□ 0.22
PSMC6-209ENST00000555175 SSUH2Q9Y2M2 353 aa16.39■□□□□ 0.21
PSMC6-209ENST00000555175 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
PSMC6-209ENST00000555175 PIP4P2Q8N4L2 257 aa16.26■□□□□ 0.19
PSMC6-209ENST00000555175 FXR2P51116 673 aaKnown RBP eCLIP16.21■□□□□ 0.19
PSMC6-209ENST00000555175 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
PSMC6-209ENST00000555175 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
PSMC6-209ENST00000555175 CLEC11AQ9Y240 323 aa16.12■□□□□ 0.17
PSMC6-209ENST00000555175 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
PSMC6-209ENST00000555175 PRKAR2AP13861 404 aaKnown RBP15.95■□□□□ 0.14
PSMC6-209ENST00000555175 PRR29P0C7W0 189 aa15.9■□□□□ 0.14
PSMC6-209ENST00000555175 HAX1O00165 279 aa15.86■□□□□ 0.13
PSMC6-209ENST00000555175 SP7Q8TDD2 431 aaPredicted RBP15.83■□□□□ 0.12
PSMC6-209ENST00000555175 CHADLQ6NUI6 762 aa15.82■□□□□ 0.12
PSMC6-209ENST00000555175 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
PSMC6-209ENST00000555175 EVX2Q03828 476 aa15.72■□□□□ 0.11
PSMC6-209ENST00000555175 C19orf67A6NJJ6 358 aa15.69■□□□□ 0.1
PSMC6-209ENST00000555175 PROM2Q8N271 834 aa15.69■□□□□ 0.1
PSMC6-209ENST00000555175 FARP1Q9Y4F1 1045 aaPredicted RBP15.62■□□□□ 0.09
PSMC6-209ENST00000555175 CREBZFQ9NS37 354 aa15.61■□□□□ 0.09
PSMC6-209ENST00000555175 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
PSMC6-209ENST00000555175 FKBP8Q14318 412 aa15.41■□□□□ 0.06
PSMC6-209ENST00000555175 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
PSMC6-209ENST00000555175 GABBR2O75899 941 aa15.37■□□□□ 0.05
PSMC6-209ENST00000555175 NPM1P06748 294 aaKnown RBP eCLIP15.29■□□□□ 0.04
PSMC6-209ENST00000555175 ZNF579Q8NAF0 562 aaKnown RBP15.27■□□□□ 0.04
PSMC6-209ENST00000555175 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
PSMC6-209ENST00000555175 CLCN6P51797 869 aa15.22■□□□□ 0.03
PSMC6-209ENST00000555175 PAK3O75914 559 aaPredicted RBP15.19■□□□□ 0.02
PSMC6-209ENST00000555175 MIER1Q8N108 512 aa15.17■□□□□ 0.02
PSMC6-209ENST00000555175 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
PSMC6-209ENST00000555175 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
PSMC6-209ENST00000555175 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
PSMC6-209ENST00000555175 POTEIP0CG38 1075 aa15.08■□□□□ 0
PSMC6-209ENST00000555175 GALR2O43603 387 aaPredicted RBP15.05■□□□□ -0
PSMC6-209ENST00000555175 FBXO3Q9UK99 471 aa15.02■□□□□ -0
PSMC6-209ENST00000555175 TSPYL2Q9H2G4 693 aaPredicted RBP15.01□□□□□ -0.01
PSMC6-209ENST00000555175 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
PSMC6-209ENST00000555175 ZBTB47Q9UFB7 747 aaPredicted RBP14.99□□□□□ -0.01
PSMC6-209ENST00000555175 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 190.5 ms