RNA–Protein interactions for RNA: ENST00000555050.1

PSMA6-210, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 309 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-210ENST00000555050 AEBP2Q6ZN18 517 aaPredicted RBP31.49■■■□□ 2.63
PSMA6-210ENST00000555050 CHIC1Q5VXU3 224 aa30.12■■■□□ 2.41
PSMA6-210ENST00000555050 SENP3Q9H4L4 574 aaPredicted RBP26.85■■□□□ 1.89
PSMA6-210ENST00000555050 PHF23Q9BUL5 403 aaPredicted RBP26.49■■□□□ 1.83
PSMA6-210ENST00000555050 FOXD1Q16676 465 aa24.97■■□□□ 1.59
PSMA6-210ENST00000555050 PLPPR3Q6T4P5 718 aa24.16■■□□□ 1.46
PSMA6-210ENST00000555050 PPP6R1Q9UPN7 881 aa23.5■■□□□ 1.35
PSMA6-210ENST00000555050 ADRA2BP18089 450 aa23.43■■□□□ 1.34
PSMA6-210ENST00000555050 PIAS4Q8N2W9 510 aaPredicted RBP23.39■■□□□ 1.33
PSMA6-210ENST00000555050 MSH5O43196 834 aa23.31■■□□□ 1.32
PSMA6-210ENST00000555050 POTEDQ86YR6 584 aa22.38■■□□□ 1.17
PSMA6-210ENST00000555050 SCAF1Q9H7N4 1312 aaKnown RBP21.45■■□□□ 1.02
PSMA6-210ENST00000555050 MAPK8IP2Q13387 824 aaPredicted RBP21.44■■□□□ 1.02
PSMA6-210ENST00000555050 DMRT2Q9Y5R5 561 aa21.33■■□□□ 1.01
PSMA6-210ENST00000555050 PPP4R3CPQ6ZMV5 832 aa21.18■□□□□ 0.98
PSMA6-210ENST00000555050 CNKSR2Q8WXI2 1034 aa20.76■□□□□ 0.91
PSMA6-210ENST00000555050 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
PSMA6-210ENST00000555050 RNF216Q9NWF9 866 aaPredicted RBP20.52■□□□□ 0.88
PSMA6-210ENST00000555050 NCBP3Q53F19 620 aaKnown RBP20.44■□□□□ 0.86
PSMA6-210ENST00000555050 DCAF8L1A6NGE4 600 aa20.37■□□□□ 0.85
PSMA6-210ENST00000555050 NPM3O75607 178 aaKnown RBP20.15■□□□□ 0.82
PSMA6-210ENST00000555050 KCNA4P22459 653 aa19.95■□□□□ 0.78
PSMA6-210ENST00000555050 RNF39Q9H2S5 420 aa19.91■□□□□ 0.78
PSMA6-210ENST00000555050 DNAJC5BQ9UF47 199 aa19.91■□□□□ 0.78
PSMA6-210ENST00000555050 CACNB1Q02641 598 aaPredicted RBP19.83■□□□□ 0.77
PSMA6-210ENST00000555050 C1QBPQ07021 282 aaKnown RBP19.63■□□□□ 0.73
PSMA6-210ENST00000555050 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.62■□□□□ 0.73
PSMA6-210ENST00000555050 U3KPZ7 1027 aaPredicted RBP19.25■□□□□ 0.67
PSMA6-210ENST00000555050 SLC4A2P04920 1241 aa19.19■□□□□ 0.66
PSMA6-210ENST00000555050 SPINK5Q9NQ38 1064 aaPredicted RBP18.89■□□□□ 0.61
PSMA6-210ENST00000555050 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
PSMA6-210ENST00000555050 CAPN15O75808 1086 aa18.83■□□□□ 0.6
PSMA6-210ENST00000555050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.79■□□□□ 0.6
PSMA6-210ENST00000555050 HNRNPUL2Q1KMD3 747 aaKnown RBP18.79■□□□□ 0.6
PSMA6-210ENST00000555050 APLP2Q06481 763 aa18.75■□□□□ 0.59
PSMA6-210ENST00000555050 DSG3P32926 999 aa18.71■□□□□ 0.59
PSMA6-210ENST00000555050 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
PSMA6-210ENST00000555050 MYCNP04198 464 aaPredicted RBP18.65■□□□□ 0.58
PSMA6-210ENST00000555050 ZNF219Q9P2Y4 722 aaPredicted RBP18.6■□□□□ 0.57
PSMA6-210ENST00000555050 TRHP20396 242 aaPredicted RBP18.57■□□□□ 0.56
PSMA6-210ENST00000555050 FOXD4L1Q9NU39 408 aa18.57■□□□□ 0.56
PSMA6-210ENST00000555050 ABCB7O75027 752 aa18.42■□□□□ 0.54
PSMA6-210ENST00000555050 ZBTB22O15209 634 aa18.36■□□□□ 0.53
PSMA6-210ENST00000555050 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
PSMA6-210ENST00000555050 POLA2Q14181 598 aa18.14■□□□□ 0.49
PSMA6-210ENST00000555050 ATXN8OSP0DMR3 200 aa18■□□□□ 0.47
PSMA6-210ENST00000555050 RBM42Q9BTD8 480 aaKnown RBP17.85■□□□□ 0.45
PSMA6-210ENST00000555050 ZBTB12Q9Y330 459 aaPredicted RBP17.84■□□□□ 0.45
PSMA6-210ENST00000555050 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
PSMA6-210ENST00000555050 POTEHQ6S545 545 aa17.58■□□□□ 0.4
PSMA6-210ENST00000555050 OSCARQ8IYS5 282 aa17.58■□□□□ 0.4
PSMA6-210ENST00000555050 EHMT2Q96KQ7 1210 aa17.55■□□□□ 0.4
PSMA6-210ENST00000555050 AKT1S1Q96B36 256 aa17.48■□□□□ 0.39
PSMA6-210ENST00000555050 FBLN2P98095 1184 aa17.46■□□□□ 0.39
PSMA6-210ENST00000555050 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
PSMA6-210ENST00000555050 CHRDL2Q6WN34 429 aa17.37■□□□□ 0.37
PSMA6-210ENST00000555050 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
PSMA6-210ENST00000555050 SPDYE2BA6NHP3 402 aa17.3■□□□□ 0.36
PSMA6-210ENST00000555050 SPDYE6P0CI01 402 aa17.3■□□□□ 0.36
PSMA6-210ENST00000555050 SPDYE2Q495Y8 402 aa17.3■□□□□ 0.36
PSMA6-210ENST00000555050 PITPNM1O00562 1244 aa17.13■□□□□ 0.33
PSMA6-210ENST00000555050 SSUH2Q9Y2M2 353 aa17.1■□□□□ 0.33
PSMA6-210ENST00000555050 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
PSMA6-210ENST00000555050 PIP4P2Q8N4L2 257 aa17■□□□□ 0.31
PSMA6-210ENST00000555050 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
PSMA6-210ENST00000555050 SPDYE1Q8NFV5 336 aaPredicted RBP16.93■□□□□ 0.3
PSMA6-210ENST00000555050 PABPN1Q86U42 306 aaKnown RBP eCLIP16.84■□□□□ 0.294e-6■□□□□ 9.3
PSMA6-210ENST00000555050 CLEC11AQ9Y240 323 aa16.84■□□□□ 0.29
PSMA6-210ENST00000555050 PRKAR2AP13861 404 aaKnown RBP16.67■□□□□ 0.26
PSMA6-210ENST00000555050 SPDYE4A6NLX3 237 aa16.64■□□□□ 0.25
PSMA6-210ENST00000555050 PRR29P0C7W0 189 aa16.61■□□□□ 0.25
PSMA6-210ENST00000555050 HAX1O00165 279 aa16.6■□□□□ 0.25
PSMA6-210ENST00000555050 SP7Q8TDD2 431 aaPredicted RBP16.58■□□□□ 0.24
PSMA6-210ENST00000555050 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
PSMA6-210ENST00000555050 STAG3Q9UJ98 1225 aa16.45■□□□□ 0.22
PSMA6-210ENST00000555050 EVX2Q03828 476 aa16.42■□□□□ 0.22
PSMA6-210ENST00000555050 C19orf67A6NJJ6 358 aa16.39■□□□□ 0.21
PSMA6-210ENST00000555050 PROM2Q8N271 834 aa16.33■□□□□ 0.2
PSMA6-210ENST00000555050 FARP1Q9Y4F1 1045 aaPredicted RBP16.31■□□□□ 0.2
PSMA6-210ENST00000555050 CREBZFQ9NS37 354 aa16.28■□□□□ 0.2
PSMA6-210ENST00000555050 CD44P16070 742 aaKnown RBP16.16■□□□□ 0.18
PSMA6-210ENST00000555050 GABBR2O75899 941 aa16.07■□□□□ 0.16
PSMA6-210ENST00000555050 MNX1P50219 401 aaPredicted RBP16.04■□□□□ 0.16
PSMA6-210ENST00000555050 FKBP8Q14318 412 aa16.01■□□□□ 0.15
PSMA6-210ENST00000555050 NPM1P06748 294 aaKnown RBP eCLIP15.98■□□□□ 0.15
PSMA6-210ENST00000555050 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.15
PSMA6-210ENST00000555050 ZNF579Q8NAF0 562 aaKnown RBP15.95■□□□□ 0.14
PSMA6-210ENST00000555050 CLCN6P51797 869 aa15.93■□□□□ 0.14
PSMA6-210ENST00000555050 PAK3O75914 559 aaPredicted RBP15.88■□□□□ 0.13
PSMA6-210ENST00000555050 MIER1Q8N108 512 aa15.83■□□□□ 0.12
PSMA6-210ENST00000555050 PLEKHG5O94827 1062 aa15.82■□□□□ 0.12
PSMA6-210ENST00000555050 PHF12Q96QT6 1004 aa15.76■□□□□ 0.11
PSMA6-210ENST00000555050 POTEIP0CG38 1075 aa15.74■□□□□ 0.11
PSMA6-210ENST00000555050 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
PSMA6-210ENST00000555050 GALR2O43603 387 aaPredicted RBP15.71■□□□□ 0.11
PSMA6-210ENST00000555050 DCBLD2Q96PD2 775 aa15.68■□□□□ 0.1
PSMA6-210ENST00000555050 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
PSMA6-210ENST00000555050 ZBTB47Q9UFB7 747 aaPredicted RBP15.65■□□□□ 0.1
PSMA6-210ENST00000555050 FBXO3Q9UK99 471 aa15.65■□□□□ 0.1
PSMA6-210ENST00000555050 CCDC61Q9Y6R9 512 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms