RNA–Protein interactions for RNA: ENST00000554275.1

NEMF-204, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 873 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-204ENST00000554275 AEBP2Q6ZN18 517 aaPredicted RBP30.14■■■□□ 2.42
NEMF-204ENST00000554275 CHIC1Q5VXU3 224 aa28.84■■■□□ 2.21
NEMF-204ENST00000554275 SENP3Q9H4L4 574 aaPredicted RBP25.58■■□□□ 1.69
NEMF-204ENST00000554275 PHF23Q9BUL5 403 aaPredicted RBP25.36■■□□□ 1.65
NEMF-204ENST00000554275 FOXD1Q16676 465 aa23.87■■□□□ 1.41
NEMF-204ENST00000554275 PLPPR3Q6T4P5 718 aa23.14■■□□□ 1.29
NEMF-204ENST00000554275 PPP6R1Q9UPN7 881 aa22.57■■□□□ 1.2
NEMF-204ENST00000554275 ADRA2BP18089 450 aa22.49■■□□□ 1.19
NEMF-204ENST00000554275 PIAS4Q8N2W9 510 aaPredicted RBP22.32■■□□□ 1.16
NEMF-204ENST00000554275 POTEDQ86YR6 584 aa22.27■■□□□ 1.16
NEMF-204ENST00000554275 MSH5O43196 834 aa22.16■■□□□ 1.14
NEMF-204ENST00000554275 MAPK8IP2Q13387 824 aaPredicted RBP20.6■□□□□ 0.89
NEMF-204ENST00000554275 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
NEMF-204ENST00000554275 PPP4R3CPQ6ZMV5 832 aa20.35■□□□□ 0.85
NEMF-204ENST00000554275 DMRT2Q9Y5R5 561 aa20.35■□□□□ 0.85
NEMF-204ENST00000554275 CNKSR2Q8WXI2 1034 aa19.88■□□□□ 0.77
NEMF-204ENST00000554275 HOXD11P31277 338 aaPredicted RBP19.72■□□□□ 0.75
NEMF-204ENST00000554275 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
NEMF-204ENST00000554275 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
NEMF-204ENST00000554275 DCAF8L1A6NGE4 600 aa19.48■□□□□ 0.71
NEMF-204ENST00000554275 NPM3O75607 178 aaKnown RBP19.37■□□□□ 0.69
NEMF-204ENST00000554275 KCNA4P22459 653 aa19.26■□□□□ 0.67
NEMF-204ENST00000554275 RNF39Q9H2S5 420 aa18.98■□□□□ 0.63
NEMF-204ENST00000554275 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
NEMF-204ENST00000554275 CACNB1Q02641 598 aaPredicted RBP18.86■□□□□ 0.61
NEMF-204ENST00000554275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.76■□□□□ 0.597e-7■□□□□ 9.1
NEMF-204ENST00000554275 C1QBPQ07021 282 aaKnown RBP18.69■□□□□ 0.58
NEMF-204ENST00000554275 SLC4A2P04920 1241 aa18.46■□□□□ 0.55
NEMF-204ENST00000554275 U3KPZ7 1027 aaPredicted RBP18.43■□□□□ 0.54
NEMF-204ENST00000554275 SLC4A1APQ9BWU0 796 aaKnown RBP18.2■□□□□ 0.5
NEMF-204ENST00000554275 SPINK5Q9NQ38 1064 aaPredicted RBP18.1■□□□□ 0.49
NEMF-204ENST00000554275 CAPN15O75808 1086 aa18■□□□□ 0.47
NEMF-204ENST00000554275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
NEMF-204ENST00000554275 HNRNPUL2Q1KMD3 747 aaKnown RBP17.93■□□□□ 0.46
NEMF-204ENST00000554275 DSG3P32926 999 aa17.87■□□□□ 0.45
NEMF-204ENST00000554275 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
NEMF-204ENST00000554275 SAMD1Q6SPF0 538 aaPredicted RBP17.86■□□□□ 0.45
NEMF-204ENST00000554275 APLP2Q06481 763 aa17.84■□□□□ 0.45
NEMF-204ENST00000554275 FOXD4L1Q9NU39 408 aa17.84■□□□□ 0.45
NEMF-204ENST00000554275 TRHP20396 242 aaPredicted RBP17.8■□□□□ 0.44
NEMF-204ENST00000554275 ZBTB22O15209 634 aa17.74■□□□□ 0.43
NEMF-204ENST00000554275 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
NEMF-204ENST00000554275 ABCB7O75027 752 aa17.64■□□□□ 0.41
NEMF-204ENST00000554275 ATF5Q9Y2D1 282 aaPredicted RBP17.52■□□□□ 0.4
NEMF-204ENST00000554275 POLA2Q14181 598 aa17.4■□□□□ 0.38
NEMF-204ENST00000554275 POTEHQ6S545 545 aa17.28■□□□□ 0.36
NEMF-204ENST00000554275 ATXN8OSP0DMR3 200 aa17.26■□□□□ 0.35
NEMF-204ENST00000554275 CSRNP3Q8WYN3 585 aa17.17■□□□□ 0.34
NEMF-204ENST00000554275 EHMT2Q96KQ7 1210 aa17.05■□□□□ 0.32
NEMF-204ENST00000554275 ZBTB12Q9Y330 459 aaPredicted RBP16.99■□□□□ 0.31
NEMF-204ENST00000554275 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
NEMF-204ENST00000554275 OSCARQ8IYS5 282 aa16.82■□□□□ 0.28
NEMF-204ENST00000554275 FBLN2P98095 1184 aa16.71■□□□□ 0.27
NEMF-204ENST00000554275 MKRN4PQ13434 485 aaPredicted RBP16.71■□□□□ 0.27
NEMF-204ENST00000554275 AKT1S1Q96B36 256 aa16.68■□□□□ 0.26
NEMF-204ENST00000554275 REM2Q8IYK8 340 aaPredicted RBP16.55■□□□□ 0.24
NEMF-204ENST00000554275 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
NEMF-204ENST00000554275 SPDYE2BA6NHP3 402 aa16.53■□□□□ 0.24
NEMF-204ENST00000554275 SPDYE6P0CI01 402 aa16.53■□□□□ 0.24
NEMF-204ENST00000554275 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
NEMF-204ENST00000554275 ZNF692Q9BU19 519 aaPredicted RBP16.39■□□□□ 0.21
NEMF-204ENST00000554275 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
NEMF-204ENST00000554275 SSUH2Q9Y2M2 353 aa16.37■□□□□ 0.21
NEMF-204ENST00000554275 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
NEMF-204ENST00000554275 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
NEMF-204ENST00000554275 PABPN1Q86U42 306 aaKnown RBP eCLIP16.17■□□□□ 0.18
NEMF-204ENST00000554275 SPDYE1Q8NFV5 336 aaPredicted RBP16.16■□□□□ 0.18
NEMF-204ENST00000554275 CLEC11AQ9Y240 323 aa16.14■□□□□ 0.17
NEMF-204ENST00000554275 SPDYE4A6NLX3 237 aa16.02■□□□□ 0.16
NEMF-204ENST00000554275 PRKAR2AP13861 404 aaKnown RBP15.94■□□□□ 0.14
NEMF-204ENST00000554275 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
NEMF-204ENST00000554275 CHADLQ6NUI6 762 aa15.84■□□□□ 0.13
NEMF-204ENST00000554275 HAX1O00165 279 aa15.83■□□□□ 0.12
NEMF-204ENST00000554275 SP7Q8TDD2 431 aaPredicted RBP15.79■□□□□ 0.12
NEMF-204ENST00000554275 EVX2Q03828 476 aa15.74■□□□□ 0.11
NEMF-204ENST00000554275 STAG3Q9UJ98 1225 aa15.74■□□□□ 0.11
NEMF-204ENST00000554275 PROM2Q8N271 834 aa15.7■□□□□ 0.1
NEMF-204ENST00000554275 C19orf67A6NJJ6 358 aa15.64■□□□□ 0.09
NEMF-204ENST00000554275 CREBZFQ9NS37 354 aa15.62■□□□□ 0.09
NEMF-204ENST00000554275 FARP1Q9Y4F1 1045 aaPredicted RBP15.62■□□□□ 0.09
NEMF-204ENST00000554275 FKBP8Q14318 412 aa15.51■□□□□ 0.07
NEMF-204ENST00000554275 CD44P16070 742 aaKnown RBP15.43■□□□□ 0.06
NEMF-204ENST00000554275 MNX1P50219 401 aaPredicted RBP15.41■□□□□ 0.06
NEMF-204ENST00000554275 GABBR2O75899 941 aa15.35■□□□□ 0.05
NEMF-204ENST00000554275 NPM1P06748 294 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEMF-204ENST00000554275 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
NEMF-204ENST00000554275 MIER1Q8N108 512 aa15.25■□□□□ 0.03
NEMF-204ENST00000554275 ZNF579Q8NAF0 562 aaKnown RBP15.21■□□□□ 0.03
NEMF-204ENST00000554275 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
NEMF-204ENST00000554275 PLEKHG5O94827 1062 aa15.14■□□□□ 0.01
NEMF-204ENST00000554275 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
NEMF-204ENST00000554275 CLCN6P51797 869 aa15.13■□□□□ 0.01
NEMF-204ENST00000554275 PHF12Q96QT6 1004 aa15.1■□□□□ 0.01
NEMF-204ENST00000554275 POTEIP0CG38 1075 aa15.06■□□□□ 0
NEMF-204ENST00000554275 FBXO3Q9UK99 471 aa15.06■□□□□ 0
NEMF-204ENST00000554275 TSPYL2Q9H2G4 693 aaPredicted RBP15.05■□□□□ -0
NEMF-204ENST00000554275 GALR2O43603 387 aaPredicted RBP15.04■□□□□ -0
NEMF-204ENST00000554275 RASEFQ8IZ41 740 aa15.02■□□□□ -0
NEMF-204ENST00000554275 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
NEMF-204ENST00000554275 ZBTB47Q9UFB7 747 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms