RNA–Protein interactions for RNA: ENST00000554151.1

ATG2B-206, Transcript of autophagy related 2B, humanhuman

TSL 3

Gene ATG2B, Length 333 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG2B-206ENST00000554151 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
ATG2B-206ENST00000554151 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
ATG2B-206ENST00000554151 POTEDQ86YR6 584 aa16.4■□□□□ 0.22
ATG2B-206ENST00000554151 SENP3Q9H4L4 574 aaPredicted RBP15.36■□□□□ 0.05
ATG2B-206ENST00000554151 PHF23Q9BUL5 403 aaPredicted RBP15.03■□□□□ -0
ATG2B-206ENST00000554151 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
ATG2B-206ENST00000554151 FOXD1Q16676 465 aa14.58□□□□□ -0.08
ATG2B-206ENST00000554151 MSH5O43196 834 aa14.11□□□□□ -0.15
ATG2B-206ENST00000554151 PIAS4Q8N2W9 510 aaPredicted RBP13.25□□□□□ -0.29
ATG2B-206ENST00000554151 CCDC180Q9P1Z9 1646 aa13.18□□□□□ -0.3
ATG2B-206ENST00000554151 PLPPR3Q6T4P5 718 aa13.16□□□□□ -0.3
ATG2B-206ENST00000554151 CACNB1Q02641 598 aaPredicted RBP13.1□□□□□ -0.31
ATG2B-206ENST00000554151 ADRA2BP18089 450 aa12.81□□□□□ -0.36
ATG2B-206ENST00000554151 PPP6R1Q9UPN7 881 aa12.79□□□□□ -0.36
ATG2B-206ENST00000554151 ABCC9O60706 1549 aa12.63□□□□□ -0.39
ATG2B-206ENST00000554151 POTEHQ6S545 545 aa12.54□□□□□ -0.4
ATG2B-206ENST00000554151 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
ATG2B-206ENST00000554151 DCAF1Q9Y4B6 1507 aa12.34□□□□□ -0.43
ATG2B-206ENST00000554151 MYO15BQ96JP2 1530 aa12.33□□□□□ -0.44
ATG2B-206ENST00000554151 NACADO15069 1562 aa12.32□□□□□ -0.44
ATG2B-206ENST00000554151 RB1CC1Q8TDY2 1594 aa12.28□□□□□ -0.44
ATG2B-206ENST00000554151 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
ATG2B-206ENST00000554151 UNC13AQ9UPW8 1703 aa12.02□□□□□ -0.49
ATG2B-206ENST00000554151 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
ATG2B-206ENST00000554151 SCRIBQ14160 1630 aa11.98□□□□□ -0.49
ATG2B-206ENST00000554151 DMRT2Q9Y5R5 561 aa11.96□□□□□ -0.49
ATG2B-206ENST00000554151 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
ATG2B-206ENST00000554151 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
ATG2B-206ENST00000554151 BICRAQ9NZM4 1560 aa11.89□□□□□ -0.51
ATG2B-206ENST00000554151 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
ATG2B-206ENST00000554151 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
ATG2B-206ENST00000554151 DCAF8L1A6NGE4 600 aa11.66□□□□□ -0.54
ATG2B-206ENST00000554151 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
ATG2B-206ENST00000554151 EIF4G1Q04637 1599 aaKnown RBP11.57□□□□□ -0.56
ATG2B-206ENST00000554151 CECR2Q9BXF3 1484 aa11.52□□□□□ -0.56
ATG2B-206ENST00000554151 BAZ1AQ9NRL2 1556 aaPredicted RBP11.52□□□□□ -0.57
ATG2B-206ENST00000554151 SMARCA4P51532 1647 aa11.5□□□□□ -0.57
ATG2B-206ENST00000554151 CC2D2AQ9P2K1 1620 aa11.46□□□□□ -0.57
ATG2B-206ENST00000554151 PPP4R3CPQ6ZMV5 832 aa11.45□□□□□ -0.58
ATG2B-206ENST00000554151 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
ATG2B-206ENST00000554151 PEG3Q9GZU2 1588 aa11.41□□□□□ -0.58
ATG2B-206ENST00000554151 SMARCA2P51531 1590 aa11.4□□□□□ -0.58
ATG2B-206ENST00000554151 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
ATG2B-206ENST00000554151 ATAD2BQ9ULI0 1458 aa11.38□□□□□ -0.59
ATG2B-206ENST00000554151 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
ATG2B-206ENST00000554151 NCAPD3P42695 1498 aa11.35□□□□□ -0.59
ATG2B-206ENST00000554151 HMGXB3Q12766 1538 aa11.34□□□□□ -0.59
ATG2B-206ENST00000554151 WIZO95785 1651 aa11.33□□□□□ -0.6
ATG2B-206ENST00000554151 CNKSR2Q8WXI2 1034 aa11.33□□□□□ -0.6
ATG2B-206ENST00000554151 HOXD11P31277 338 aaPredicted RBP11.31□□□□□ -0.6
ATG2B-206ENST00000554151 BAZ1BQ9UIG0 1483 aaKnown RBP11.3□□□□□ -0.6
ATG2B-206ENST00000554151 TOP2AP11388 1531 aaKnown RBP11.25□□□□□ -0.61
ATG2B-206ENST00000554151 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
ATG2B-206ENST00000554151 SUPT5HO00267 1087 aaKnown RBP11.17□□□□□ -0.62
ATG2B-206ENST00000554151 NCBP3Q53F19 620 aaKnown RBP11.13□□□□□ -0.63
ATG2B-206ENST00000554151 CCDC88BA6NC98 1476 aa11.08□□□□□ -0.64
ATG2B-206ENST00000554151 LAMC3Q9Y6N6 1575 aa11.04□□□□□ -0.64
ATG2B-206ENST00000554151 SP7Q8TDD2 431 aaPredicted RBP11.04□□□□□ -0.64
ATG2B-206ENST00000554151 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
ATG2B-206ENST00000554151 CADPSQ9ULU8 1353 aa11.02□□□□□ -0.65
ATG2B-206ENST00000554151 CFTRP13569 1480 aa11□□□□□ -0.65
ATG2B-206ENST00000554151 PRDM2Q13029 1718 aa10.99□□□□□ -0.65
ATG2B-206ENST00000554151 NESP48681 1621 aa10.98□□□□□ -0.65
ATG2B-206ENST00000554151 PDS5BQ9NTI5 1447 aa10.93□□□□□ -0.66
ATG2B-206ENST00000554151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.66
ATG2B-206ENST00000554151 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
ATG2B-206ENST00000554151 ERCC6Q03468 1493 aa10.88□□□□□ -0.67
ATG2B-206ENST00000554151 FANCD2Q9BXW9 1451 aa10.88□□□□□ -0.67
ATG2B-206ENST00000554151 CEP164Q9UPV0 1460 aa10.87□□□□□ -0.67
ATG2B-206ENST00000554151 THOC2Q8NI27 1593 aaKnown RBP10.83□□□□□ -0.68
ATG2B-206ENST00000554151 MRC2Q9UBG0 1479 aa10.81□□□□□ -0.68
ATG2B-206ENST00000554151 WDR62O43379 1518 aa10.79□□□□□ -0.68
ATG2B-206ENST00000554151 ABCC8Q09428 1581 aa10.77□□□□□ -0.68
ATG2B-206ENST00000554151 URB2Q14146 1524 aaKnown RBP10.77□□□□□ -0.69
ATG2B-206ENST00000554151 DNMBPQ6XZF7 1577 aa10.77□□□□□ -0.69
ATG2B-206ENST00000554151 TOPBP1Q92547 1522 aa10.74□□□□□ -0.69
ATG2B-206ENST00000554151 NPM3O75607 178 aaKnown RBP10.74□□□□□ -0.69
ATG2B-206ENST00000554151 CUX2O14529 1486 aa10.74□□□□□ -0.69
ATG2B-206ENST00000554151 WRNQ14191 1432 aaPredicted RBP eCLIP10.73□□□□□ -0.69
ATG2B-206ENST00000554151 CUX1P39880 1505 aa10.73□□□□□ -0.69
ATG2B-206ENST00000554151 DSG3P32926 999 aa10.72□□□□□ -0.69
ATG2B-206ENST00000554151 BIVM-ERCC5R4GMW8 1640 aa10.72□□□□□ -0.69
ATG2B-206ENST00000554151 TOP2BQ02880 1626 aa10.7□□□□□ -0.7
ATG2B-206ENST00000554151 SYNJ1O43426 1573 aa10.69□□□□□ -0.7
ATG2B-206ENST00000554151 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
ATG2B-206ENST00000554151 FGD5Q6ZNL6 1462 aa10.67□□□□□ -0.7
ATG2B-206ENST00000554151 IFT140Q96RY7 1462 aa10.64□□□□□ -0.71
ATG2B-206ENST00000554151 TARBP1Q13395 1621 aaKnown RBP10.62□□□□□ -0.71
ATG2B-206ENST00000554151 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
ATG2B-206ENST00000554151 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
ATG2B-206ENST00000554151 SOGA1O94964 1423 aa10.6□□□□□ -0.71
ATG2B-206ENST00000554151 RAD54L2Q9Y4B4 1467 aa10.59□□□□□ -0.71
ATG2B-206ENST00000554151 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
ATG2B-206ENST00000554151 TRIM41Q8WV44 630 aa10.56□□□□□ -0.72
ATG2B-206ENST00000554151 EIF4G3O43432 1585 aaKnown RBP10.55□□□□□ -0.72
ATG2B-206ENST00000554151 ZNF608Q9ULD9 1512 aaPredicted RBP10.54□□□□□ -0.72
ATG2B-206ENST00000554151 ABCA5Q8WWZ7 1642 aa10.54□□□□□ -0.72
ATG2B-206ENST00000554151 CAPN15O75808 1086 aa10.53□□□□□ -0.72
ATG2B-206ENST00000554151 APLP2Q06481 763 aa10.51□□□□□ -0.73
ATG2B-206ENST00000554151 TDRD9Q8NDG6 1382 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms