RNA–Protein interactions for RNA: ENST00000554124.2

STRN3-204, Transcript of striatin 3, humanhuman

TSL 4

Gene STRN3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-204ENST00000554124 AEBP2Q6ZN18 517 aaPredicted RBP24.04■■□□□ 1.44
STRN3-204ENST00000554124 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
STRN3-204ENST00000554124 SENP3Q9H4L4 574 aaPredicted RBP20.62■□□□□ 0.89
STRN3-204ENST00000554124 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
STRN3-204ENST00000554124 FOXD1Q16676 465 aa19.1■□□□□ 0.65
STRN3-204ENST00000554124 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
STRN3-204ENST00000554124 PIAS4Q8N2W9 510 aaPredicted RBP17.98■□□□□ 0.47
STRN3-204ENST00000554124 PPP6R1Q9UPN7 881 aa17.98■□□□□ 0.47
STRN3-204ENST00000554124 ADRA2BP18089 450 aa17.97■□□□□ 0.47
STRN3-204ENST00000554124 MSH5O43196 834 aa17.91■□□□□ 0.46
STRN3-204ENST00000554124 POTEDQ86YR6 584 aa17■□□□□ 0.31
STRN3-204ENST00000554124 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
STRN3-204ENST00000554124 MAPK8IP2Q13387 824 aaPredicted RBP16.41■□□□□ 0.22
STRN3-204ENST00000554124 DMRT2Q9Y5R5 561 aa16.34■□□□□ 0.21
STRN3-204ENST00000554124 PPP4R3CPQ6ZMV5 832 aa16.33■□□□□ 0.2
STRN3-204ENST00000554124 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
STRN3-204ENST00000554124 NCBP3Q53F19 620 aaKnown RBP15.87■□□□□ 0.13
STRN3-204ENST00000554124 HOXD11P31277 338 aaPredicted RBP15.82■□□□□ 0.12
STRN3-204ENST00000554124 RNF216Q9NWF9 866 aaPredicted RBP15.8■□□□□ 0.12
STRN3-204ENST00000554124 DCAF8L1A6NGE4 600 aa15.74■□□□□ 0.11
STRN3-204ENST00000554124 NPM3O75607 178 aaKnown RBP15.52■□□□□ 0.08
STRN3-204ENST00000554124 KCNA4P22459 653 aa15.4■□□□□ 0.06
STRN3-204ENST00000554124 DNAJC5BQ9UF47 199 aa15.27■□□□□ 0.04
STRN3-204ENST00000554124 CACNB1Q02641 598 aaPredicted RBP15.22■□□□□ 0.03
STRN3-204ENST00000554124 RNF39Q9H2S5 420 aa15.22■□□□□ 0.03
STRN3-204ENST00000554124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.15■□□□□ 0.02
STRN3-204ENST00000554124 C1QBPQ07021 282 aaKnown RBP15.07■□□□□ 0
STRN3-204ENST00000554124 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
STRN3-204ENST00000554124 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
STRN3-204ENST00000554124 SLC4A1APQ9BWU0 796 aaKnown RBP14.65□□□□□ -0.06
STRN3-204ENST00000554124 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.57□□□□□ -0.08
STRN3-204ENST00000554124 APLP2Q06481 763 aa14.57□□□□□ -0.08
STRN3-204ENST00000554124 HNRNPUL2Q1KMD3 747 aaKnown RBP14.57□□□□□ -0.08
STRN3-204ENST00000554124 CAPN15O75808 1086 aa14.53□□□□□ -0.08
STRN3-204ENST00000554124 SPINK5Q9NQ38 1064 aaPredicted RBP14.47□□□□□ -0.09
STRN3-204ENST00000554124 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
STRN3-204ENST00000554124 MYCNP04198 464 aaPredicted RBP14.42□□□□□ -0.1
STRN3-204ENST00000554124 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
STRN3-204ENST00000554124 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
STRN3-204ENST00000554124 TRHP20396 242 aaPredicted RBP14.34□□□□□ -0.11
STRN3-204ENST00000554124 DSG3P32926 999 aa14.33□□□□□ -0.12
STRN3-204ENST00000554124 ABCB7O75027 752 aa14.16□□□□□ -0.14
STRN3-204ENST00000554124 ZBTB22O15209 634 aa14.1□□□□□ -0.15
STRN3-204ENST00000554124 POLA2Q14181 598 aa13.98□□□□□ -0.17
STRN3-204ENST00000554124 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
STRN3-204ENST00000554124 ATXN8OSP0DMR3 200 aa13.93□□□□□ -0.18
STRN3-204ENST00000554124 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
STRN3-204ENST00000554124 RBM42Q9BTD8 480 aaKnown RBP13.79□□□□□ -0.2
STRN3-204ENST00000554124 EHMT2Q96KQ7 1210 aa13.7□□□□□ -0.22
STRN3-204ENST00000554124 CSRNP3Q8WYN3 585 aa13.69□□□□□ -0.22
STRN3-204ENST00000554124 FBLN2P98095 1184 aa13.56□□□□□ -0.24
STRN3-204ENST00000554124 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
STRN3-204ENST00000554124 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
STRN3-204ENST00000554124 POTEHQ6S545 545 aa13.41□□□□□ -0.26
STRN3-204ENST00000554124 SPDYE2BA6NHP3 402 aa13.35□□□□□ -0.27
STRN3-204ENST00000554124 SPDYE6P0CI01 402 aa13.35□□□□□ -0.27
STRN3-204ENST00000554124 SPDYE2Q495Y8 402 aa13.35□□□□□ -0.27
STRN3-204ENST00000554124 MKRN4PQ13434 485 aaPredicted RBP13.32□□□□□ -0.28
STRN3-204ENST00000554124 CHRDL2Q6WN34 429 aa13.32□□□□□ -0.28
STRN3-204ENST00000554124 REM2Q8IYK8 340 aaPredicted RBP13.29□□□□□ -0.28
STRN3-204ENST00000554124 ZNF692Q9BU19 519 aaPredicted RBP13.22□□□□□ -0.29
STRN3-204ENST00000554124 PITPNM1O00562 1244 aa13.14□□□□□ -0.31
STRN3-204ENST00000554124 SSUH2Q9Y2M2 353 aa13.14□□□□□ -0.31
STRN3-204ENST00000554124 SPDYE1Q8NFV5 336 aaPredicted RBP13.08□□□□□ -0.32
STRN3-204ENST00000554124 CLEC11AQ9Y240 323 aa13.04□□□□□ -0.32
STRN3-204ENST00000554124 PABPN1Q86U42 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
STRN3-204ENST00000554124 PIP4P2Q8N4L2 257 aa13.02□□□□□ -0.33
STRN3-204ENST00000554124 FXR2P51116 673 aaKnown RBP eCLIP12.98□□□□□ -0.33
STRN3-204ENST00000554124 SPDYE4A6NLX3 237 aa12.9□□□□□ -0.34
STRN3-204ENST00000554124 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
STRN3-204ENST00000554124 PRKAR2AP13861 404 aaKnown RBP12.83□□□□□ -0.36
STRN3-204ENST00000554124 HAX1O00165 279 aa12.78□□□□□ -0.36
STRN3-204ENST00000554124 STAG3Q9UJ98 1225 aa12.78□□□□□ -0.36
STRN3-204ENST00000554124 CHADLQ6NUI6 762 aa12.69□□□□□ -0.38
STRN3-204ENST00000554124 SP7Q8TDD2 431 aaPredicted RBP12.68□□□□□ -0.38
STRN3-204ENST00000554124 FARP1Q9Y4F1 1045 aaPredicted RBP12.56□□□□□ -0.4
STRN3-204ENST00000554124 C19orf67A6NJJ6 358 aa12.55□□□□□ -0.4
STRN3-204ENST00000554124 PROM2Q8N271 834 aa12.55□□□□□ -0.4
STRN3-204ENST00000554124 CREBZFQ9NS37 354 aa12.51□□□□□ -0.41
STRN3-204ENST00000554124 EVX2Q03828 476 aa12.5□□□□□ -0.41
STRN3-204ENST00000554124 FKBP8Q14318 412 aa12.48□□□□□ -0.41
STRN3-204ENST00000554124 CD44P16070 742 aaKnown RBP12.45□□□□□ -0.42
STRN3-204ENST00000554124 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
STRN3-204ENST00000554124 PLEKHG5O94827 1062 aa12.4□□□□□ -0.42
STRN3-204ENST00000554124 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
STRN3-204ENST00000554124 CLCN6P51797 869 aa12.32□□□□□ -0.44
STRN3-204ENST00000554124 ZRANB1Q9UGI0 708 aa12.32□□□□□ -0.44
STRN3-204ENST00000554124 GABBR2O75899 941 aa12.31□□□□□ -0.44
STRN3-204ENST00000554124 MIER1Q8N108 512 aa12.31□□□□□ -0.44
STRN3-204ENST00000554124 MNX1P50219 401 aaPredicted RBP12.28□□□□□ -0.44
STRN3-204ENST00000554124 PLCD3Q8N3E9 789 aa12.26□□□□□ -0.45
STRN3-204ENST00000554124 ZNF579Q8NAF0 562 aaKnown RBP12.25□□□□□ -0.45
STRN3-204ENST00000554124 FBXO3Q9UK99 471 aa12.24□□□□□ -0.45
STRN3-204ENST00000554124 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
STRN3-204ENST00000554124 TSPYL2Q9H2G4 693 aaPredicted RBP12.13□□□□□ -0.47
STRN3-204ENST00000554124 DCBLD2Q96PD2 775 aa12.12□□□□□ -0.47
STRN3-204ENST00000554124 PHF12Q96QT6 1004 aa12.11□□□□□ -0.47
STRN3-204ENST00000554124 GALR2O43603 387 aaPredicted RBP12.06□□□□□ -0.48
STRN3-204ENST00000554124 RASEFQ8IZ41 740 aa12.02□□□□□ -0.49
STRN3-204ENST00000554124 CCDC61Q9Y6R9 512 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms