RNA–Protein interactions for RNA: ENST00000553994.1

CKB-206, Transcript of creatine kinase B, humanhuman

TSL 2

Gene CKB, Length 746 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKB-206ENST00000553994 LARP7Q4G0J3 582 aaKnown RBP eCLIP28.34■■■□□ 2.134e-12■■■■■ 139.7
CKB-206ENST00000553994 UTP3Q9NQZ2 479 aaKnown RBP eCLIP31.23■■■□□ 2.591e-7■■■■■ 115.4
CKB-206ENST00000553994 XRN2Q9H0D6 950 aaKnown RBP eCLIP34.24■■■■□ 3.073e-19■■■■■ 108.1
CKB-206ENST00000553994 AATFQ9NY61 560 aaKnown RBP eCLIP35.59■■■■□ 3.292e-21■■■■■ 73.9
CKB-206ENST00000553994 WDR3Q9UNX4 943 aaKnown RBP eCLIP30.89■■■□□ 2.547e-8■■■■■ 73.4
CKB-206ENST00000553994 NIPBLQ6KC79 2804 aaeCLIP24.76■■□□□ 1.551e-12■■■■■ 72.1
CKB-206ENST00000553994 SDAD1Q9NVU7 687 aaKnown RBP eCLIP27.28■■□□□ 1.962e-23■■■■■ 66.4
CKB-206ENST00000553994 GPKOWQ92917 476 aaPredicted RBP eCLIP33.74■■■□□ 2.991e-8■■■■■ 65.4
CKB-206ENST00000553994 SERBP1Q8NC51 408 aaKnown RBP eCLIP28.58■■■□□ 2.173e-6■■■■■ 57.2
CKB-206ENST00000553994 PCBP1Q15365 356 aaKnown RBP eCLIP32.52■■■□□ 2.82e-8■■■■■ 57.1
CKB-206ENST00000553994 SF3B1O75533 1304 aaKnown RBP eCLIP31.94■■■□□ 2.72e-6■■■■■ 55.7
CKB-206ENST00000553994 WRNQ14191 1432 aaPredicted RBP eCLIP51.17■■■■■ 5.787e-7■■■■■ 52.5
CKB-206ENST00000553994 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.71■■■□□ 2.033e-8■■■■■ 50.5
CKB-206ENST00000553994 NKRFO15226 690 aaKnown RBP eCLIP33.73■■■□□ 2.992e-8■■■■■ 32.4
CKB-206ENST00000553994 DKC1O60832 514 aaKnown RBP eCLIP32.95■■■□□ 2.872e-7■■■■■ 31.2
CKB-206ENST00000553994 DDX3XO00571 662 aaKnown RBP eCLIP30.27■■■□□ 2.443e-20■■■■■ 30.8
CKB-206ENST00000553994 DHX30Q7L2E3 1194 aaKnown RBP eCLIP34.28■■■■□ 3.082e-13■■■■■ 30.7
CKB-206ENST00000553994 DDX51Q8N8A6 666 aaKnown RBP eCLIP30.33■■■□□ 2.452e-6■■■■■ 30.5
CKB-206ENST00000553994 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP46.92■■■■■ 5.11e-11■■■■□ 22.7
CKB-206ENST00000553994 BUD13Q9BRD0 619 aaKnown RBP eCLIP33.1■■■□□ 2.892e-8■■■■□ 22.6
CKB-206ENST00000553994 DDX24Q9GZR7 859 aaKnown RBP eCLIP35.53■■■■□ 3.283e-7■■■■□ 22.2
CKB-206ENST00000553994 RPS3P23396 243 aaKnown RBP eCLIP28.61■■■□□ 2.171e-9■■■■□ 19.8
CKB-206ENST00000553994 SUB1P53999 127 aaKnown RBP eCLIP22.33■■□□□ 1.179e-7■■■□□ 17.7
CKB-206ENST00000553994 PPIGQ13427 754 aaKnown RBP eCLIP33.23■■■□□ 2.911e-7■■■□□ 16.6
CKB-206ENST00000553994 XPO5Q9HAV4 1204 aaKnown RBP eCLIP35.38■■■■□ 3.255e-7■■■□□ 16
CKB-206ENST00000553994 YBX3P16989 372 aaKnown RBP eCLIP37.85■■■■□ 3.654e-9■■■□□ 15.9
CKB-206ENST00000553994 PUM1Q14671 1186 aaKnown RBP eCLIP29.71■■■□□ 2.355e-7■■■□□ 14.6
CKB-206ENST00000553994 XRCC6P12956 609 aaKnown RBP eCLIP32.72■■■□□ 2.836e-8■■□□□ 12.6
CKB-206ENST00000553994 ZNF800Q2TB10 664 aaPredicted RBP eCLIP26.97■■□□□ 1.912e-9■■□□□ 12.5
CKB-206ENST00000553994 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP24.84■■□□□ 1.574e-7■■□□□ 11.6
CKB-206ENST00000553994 METAP2P50579 478 aaKnown RBP eCLIP33.87■■■■□ 3.016e-9■□□□□ 10.6
CKB-206ENST00000553994 KHSRPQ92945 711 aaKnown RBP eCLIP31.37■■■□□ 2.614e-7■□□□□ 10.4
CKB-206ENST00000553994 AQRO60306 1485 aaKnown RBP eCLIP51.01■■■■■ 5.761e-9■□□□□ 9.6
CKB-206ENST00000553994 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP30.36■■■□□ 2.452e-7■□□□□ 8.4
Retrieved 34 of 34 RNA–protein pairs in 9.1 ms