RNA–Protein interactions for RNA: ENST00000552864.5

LIN7A-204, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN7A, Length 6,112 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-204ENST00000552864 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
LIN7A-204ENST00000552864 DCAF8L2P0C7V8 631 aa13.41□□□□□ -0.26
LIN7A-204ENST00000552864 SHROOM4Q9ULL8 1493 aa12.32□□□□□ -0.44
LIN7A-204ENST00000552864 SUPT5HO00267 1087 aaKnown RBP12.32□□□□□ -0.44
LIN7A-204ENST00000552864 FAM9AQ8IZU1 332 aaPredicted RBP11.94□□□□□ -0.5
LIN7A-204ENST00000552864 ABCC9O60706 1549 aa11.84□□□□□ -0.51
LIN7A-204ENST00000552864 APLP2Q06481 763 aa11.73□□□□□ -0.53
LIN7A-204ENST00000552864 EHMT2Q96KQ7 1210 aa11.69□□□□□ -0.54
LIN7A-204ENST00000552864 TRIM41Q8WV44 630 aa11.56□□□□□ -0.56
LIN7A-204ENST00000552864 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
LIN7A-204ENST00000552864 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
LIN7A-204ENST00000552864 RANGAP1P46060 587 aaPredicted RBP11.41□□□□□ -0.58
LIN7A-204ENST00000552864 ATP1B4Q9UN42 357 aaPredicted RBP11.41□□□□□ -0.58
LIN7A-204ENST00000552864 UBTFP17480 764 aaKnown RBP11.4□□□□□ -0.58
LIN7A-204ENST00000552864 RB1CC1Q8TDY2 1594 aa11.24□□□□□ -0.61
LIN7A-204ENST00000552864 TTBK1Q5TCY1 1321 aaPredicted RBP11.23□□□□□ -0.61
LIN7A-204ENST00000552864 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
LIN7A-204ENST00000552864 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.2□□□□□ -0.62
LIN7A-204ENST00000552864 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
LIN7A-204ENST00000552864 ZCCHC6Q5VYS8 1495 aaKnown RBP11.19□□□□□ -0.62
LIN7A-204ENST00000552864 MYT1LQ9UL68 1186 aa11.14□□□□□ -0.63
LIN7A-204ENST00000552864 NACADO15069 1562 aa11.12□□□□□ -0.63
LIN7A-204ENST00000552864 FBLN2P98095 1184 aa11.05□□□□□ -0.64
LIN7A-204ENST00000552864 PCGF6Q9BYE7 350 aa10.97□□□□□ -0.65
LIN7A-204ENST00000552864 CHIC1Q5VXU3 224 aa10.95□□□□□ -0.66
LIN7A-204ENST00000552864 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
LIN7A-204ENST00000552864 ZEB1P37275 1124 aaPredicted RBP10.88□□□□□ -0.67
LIN7A-204ENST00000552864 DCAF1Q9Y4B6 1507 aa10.85□□□□□ -0.67
LIN7A-204ENST00000552864 ITGAEP38570 1179 aa10.84□□□□□ -0.67
LIN7A-204ENST00000552864 NPM1P06748 294 aaKnown RBP eCLIP10.81□□□□□ -0.68
LIN7A-204ENST00000552864 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
LIN7A-204ENST00000552864 BAZ1BQ9UIG0 1483 aaKnown RBP10.79□□□□□ -0.68
LIN7A-204ENST00000552864 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
LIN7A-204ENST00000552864 LOC105371045A0A1W2PR82 267 aa10.77□□□□□ -0.69
LIN7A-204ENST00000552864 CDK11AQ9UQ88 783 aaPredicted RBP10.76□□□□□ -0.69
LIN7A-204ENST00000552864 CSRNP3Q8WYN3 585 aa10.76□□□□□ -0.69
LIN7A-204ENST00000552864 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
LIN7A-204ENST00000552864 FAM50AQ14320 339 aaKnown RBP10.73□□□□□ -0.69
LIN7A-204ENST00000552864 CHMP7Q8WUX9 453 aaPredicted RBP10.73□□□□□ -0.69
LIN7A-204ENST00000552864 TRIM26Q12899 539 aaPredicted RBP10.72□□□□□ -0.69
LIN7A-204ENST00000552864 BAZ1AQ9NRL2 1556 aaPredicted RBP10.71□□□□□ -0.7
LIN7A-204ENST00000552864 MYO15BQ96JP2 1530 aa10.68□□□□□ -0.7
LIN7A-204ENST00000552864 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
LIN7A-204ENST00000552864 TRIM52Q96A61 297 aa10.65□□□□□ -0.7
LIN7A-204ENST00000552864 ESF1Q9H501 851 aaKnown RBP10.65□□□□□ -0.7
LIN7A-204ENST00000552864 RSF1Q96T23 1441 aaPredicted RBP10.65□□□□□ -0.7
LIN7A-204ENST00000552864 ARID3CA6NKF2 412 aa10.63□□□□□ -0.71
LIN7A-204ENST00000552864 SMARCA2P51531 1590 aa10.6□□□□□ -0.71
LIN7A-204ENST00000552864 POLR3GLQ9BT43 218 aa10.59□□□□□ -0.71
LIN7A-204ENST00000552864 ZNF777Q9ULD5 760 aaPredicted RBP10.58□□□□□ -0.72
LIN7A-204ENST00000552864 PDS5BQ9NTI5 1447 aa10.55□□□□□ -0.72
LIN7A-204ENST00000552864 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
LIN7A-204ENST00000552864 WRNQ14191 1432 aaPredicted RBP eCLIP10.53□□□□□ -0.72
LIN7A-204ENST00000552864 BCANQ96GW7 911 aa10.53□□□□□ -0.72
LIN7A-204ENST00000552864 CECR2Q9BXF3 1484 aa10.52□□□□□ -0.72
LIN7A-204ENST00000552864 CENPBP07199 599 aaPredicted RBP10.51□□□□□ -0.73
LIN7A-204ENST00000552864 EEA1Q15075 1411 aa10.5□□□□□ -0.73
LIN7A-204ENST00000552864 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
LIN7A-204ENST00000552864 STAG3Q9UJ98 1225 aa10.46□□□□□ -0.74
LIN7A-204ENST00000552864 PLEKHD1A6NEE1 506 aa10.44□□□□□ -0.74
LIN7A-204ENST00000552864 NEFLP07196 543 aa10.43□□□□□ -0.74
LIN7A-204ENST00000552864 TSPY4P0CV99 314 aa10.43□□□□□ -0.74
LIN7A-204ENST00000552864 TSPY10P0CW01 314 aa10.43□□□□□ -0.74
LIN7A-204ENST00000552864 MTUS2Q5JR59 1369 aa10.42□□□□□ -0.74
LIN7A-204ENST00000552864 ZNF326Q5BKZ1 582 aaKnown RBP10.41□□□□□ -0.74
LIN7A-204ENST00000552864 NEUROD1Q13562 356 aa10.4□□□□□ -0.74
LIN7A-204ENST00000552864 MROH2BQ7Z745 1585 aa10.4□□□□□ -0.74
LIN7A-204ENST00000552864 KCNH8Q96L42 1107 aa10.39□□□□□ -0.75
LIN7A-204ENST00000552864 PLPPR3Q6T4P5 718 aa10.39□□□□□ -0.75
LIN7A-204ENST00000552864 CADPSQ9ULU8 1353 aa10.38□□□□□ -0.75
LIN7A-204ENST00000552864 GOLGA3Q08378 1498 aa10.37□□□□□ -0.75
LIN7A-204ENST00000552864 CHGAP10645 457 aaKnown RBP10.36□□□□□ -0.75
LIN7A-204ENST00000552864 CLIP1P30622 1438 aa10.36□□□□□ -0.75
LIN7A-204ENST00000552864 ATAD2BQ9ULI0 1458 aa10.36□□□□□ -0.75
LIN7A-204ENST00000552864 CEP164Q9UPV0 1460 aa10.35□□□□□ -0.75
LIN7A-204ENST00000552864 CUX2O14529 1486 aa10.35□□□□□ -0.75
LIN7A-204ENST00000552864 CCDC88BA6NC98 1476 aa10.34□□□□□ -0.75
LIN7A-204ENST00000552864 TRHP20396 242 aaPredicted RBP10.34□□□□□ -0.75
LIN7A-204ENST00000552864 CNGB1Q14028 1251 aaPredicted RBP10.34□□□□□ -0.75
LIN7A-204ENST00000552864 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
LIN7A-204ENST00000552864 SOGA1O94964 1423 aa10.33□□□□□ -0.76
LIN7A-204ENST00000552864 SMARCA4P51532 1647 aa10.31□□□□□ -0.76
LIN7A-204ENST00000552864 CARMIL1Q5VZK9 1371 aa10.31□□□□□ -0.76
LIN7A-204ENST00000552864 ARID4BQ4LE39 1312 aaPredicted RBP10.31□□□□□ -0.76
LIN7A-204ENST00000552864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.31□□□□□ -0.76
LIN7A-204ENST00000552864 ACIN1Q9UKV3 1341 aaKnown RBP10.3□□□□□ -0.76
LIN7A-204ENST00000552864 CARMIL2Q6F5E8 1435 aa10.3□□□□□ -0.76
LIN7A-204ENST00000552864 EIF4G1Q04637 1599 aaKnown RBP10.29□□□□□ -0.76
LIN7A-204ENST00000552864 ABCC8Q09428 1581 aa10.28□□□□□ -0.76
LIN7A-204ENST00000552864 YTHDC1Q96MU7 727 aaKnown RBP10.28□□□□□ -0.76
LIN7A-204ENST00000552864 CHIC2Q9UKJ5 165 aa10.27□□□□□ -0.77
LIN7A-204ENST00000552864 NEFMP07197 916 aa10.27□□□□□ -0.77
LIN7A-204ENST00000552864 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
LIN7A-204ENST00000552864 HRCP23327 699 aa10.25□□□□□ -0.77
LIN7A-204ENST00000552864 TDRD9Q8NDG6 1382 aaKnown RBP10.24□□□□□ -0.77
LIN7A-204ENST00000552864 WIZO95785 1651 aa10.24□□□□□ -0.77
LIN7A-204ENST00000552864 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
LIN7A-204ENST00000552864 FHAD1B1AJZ9 1412 aa10.23□□□□□ -0.77
LIN7A-204ENST00000552864 TNIKQ9UKE5 1360 aa10.22□□□□□ -0.77
LIN7A-204ENST00000552864 PPP1R15AO75807 674 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms