RNA–Protein interactions for RNA: ENST00000552151.2

CNOT2-235, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-235ENST00000552151 AEBP2Q6ZN18 517 aaPredicted RBP17.49■□□□□ 0.39
CNOT2-235ENST00000552151 CHIC1Q5VXU3 224 aa16.44■□□□□ 0.22
CNOT2-235ENST00000552151 POTEDQ86YR6 584 aa15.69■□□□□ 0.1
CNOT2-235ENST00000552151 SENP3Q9H4L4 574 aaPredicted RBP15.22■□□□□ 0.03
CNOT2-235ENST00000552151 PHF23Q9BUL5 403 aaPredicted RBP14.81□□□□□ -0.04
CNOT2-235ENST00000552151 FOXD1Q16676 465 aa14.28□□□□□ -0.12
CNOT2-235ENST00000552151 MSH5O43196 834 aa13.93□□□□□ -0.18
CNOT2-235ENST00000552151 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
CNOT2-235ENST00000552151 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
CNOT2-235ENST00000552151 PLPPR3Q6T4P5 718 aa12.42□□□□□ -0.42
CNOT2-235ENST00000552151 PPP6R1Q9UPN7 881 aa12.34□□□□□ -0.43
CNOT2-235ENST00000552151 ADRA2BP18089 450 aa12.26□□□□□ -0.45
CNOT2-235ENST00000552151 POTEHQ6S545 545 aa12.07□□□□□ -0.48
CNOT2-235ENST00000552151 DMRT2Q9Y5R5 561 aa11.84□□□□□ -0.51
CNOT2-235ENST00000552151 RNF39Q9H2S5 420 aa11.71□□□□□ -0.54
CNOT2-235ENST00000552151 MAPK8IP2Q13387 824 aaPredicted RBP11.64□□□□□ -0.55
CNOT2-235ENST00000552151 C1QBPQ07021 282 aaKnown RBP11.51□□□□□ -0.57
CNOT2-235ENST00000552151 DCAF8L1A6NGE4 600 aa11.48□□□□□ -0.57
CNOT2-235ENST00000552151 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
CNOT2-235ENST00000552151 HOXD11P31277 338 aaPredicted RBP10.9□□□□□ -0.66
CNOT2-235ENST00000552151 PPP4R3CPQ6ZMV5 832 aa10.84□□□□□ -0.67
CNOT2-235ENST00000552151 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
CNOT2-235ENST00000552151 SP7Q8TDD2 431 aaPredicted RBP10.73□□□□□ -0.69
CNOT2-235ENST00000552151 CNKSR2Q8WXI2 1034 aa10.69□□□□□ -0.7
CNOT2-235ENST00000552151 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
CNOT2-235ENST00000552151 DSG3P32926 999 aa10.54□□□□□ -0.72
CNOT2-235ENST00000552151 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.73
CNOT2-235ENST00000552151 NCBP3Q53F19 620 aaKnown RBP10.51□□□□□ -0.73
CNOT2-235ENST00000552151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.45□□□□□ -0.743e-8■■■■■ 28.7
CNOT2-235ENST00000552151 CHRDL2Q6WN34 429 aa10.39□□□□□ -0.75
CNOT2-235ENST00000552151 CAPN15O75808 1086 aa10.36□□□□□ -0.75
CNOT2-235ENST00000552151 SPINK5Q9NQ38 1064 aaPredicted RBP10.25□□□□□ -0.77
CNOT2-235ENST00000552151 NPM3O75607 178 aaKnown RBP10.24□□□□□ -0.77
CNOT2-235ENST00000552151 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
CNOT2-235ENST00000552151 HAX1O00165 279 aa10.08□□□□□ -0.8
CNOT2-235ENST00000552151 LHX8Q68G74 356 aa10.06□□□□□ -0.8
CNOT2-235ENST00000552151 U3KPZ7 1027 aaPredicted RBP10□□□□□ -0.81
CNOT2-235ENST00000552151 KCNA4P22459 653 aa9.98□□□□□ -0.81
CNOT2-235ENST00000552151 ABCB7O75027 752 aa9.96□□□□□ -0.81
CNOT2-235ENST00000552151 TRHP20396 242 aaPredicted RBP9.88□□□□□ -0.83
CNOT2-235ENST00000552151 PIP4P2Q8N4L2 257 aa9.87□□□□□ -0.83
CNOT2-235ENST00000552151 ZNF219Q9P2Y4 722 aaPredicted RBP9.83□□□□□ -0.84
CNOT2-235ENST00000552151 APLP2Q06481 763 aa9.81□□□□□ -0.84
CNOT2-235ENST00000552151 SLC4A2P04920 1241 aa9.76□□□□□ -0.85
CNOT2-235ENST00000552151 EVX2Q03828 476 aa9.76□□□□□ -0.85
CNOT2-235ENST00000552151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.75□□□□□ -0.85
CNOT2-235ENST00000552151 HNRNPUL2Q1KMD3 747 aaKnown RBP9.75□□□□□ -0.85
CNOT2-235ENST00000552151 SAMD1Q6SPF0 538 aaPredicted RBP9.66□□□□□ -0.86
CNOT2-235ENST00000552151 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
CNOT2-235ENST00000552151 FXR2P51116 673 aaKnown RBP eCLIP9.61□□□□□ -0.87
CNOT2-235ENST00000552151 MYCNP04198 464 aaPredicted RBP9.55□□□□□ -0.88
CNOT2-235ENST00000552151 POTEMA6NI47 508 aa9.53□□□□□ -0.88
CNOT2-235ENST00000552151 GABBR2O75899 941 aa9.53□□□□□ -0.88
CNOT2-235ENST00000552151 REM2Q8IYK8 340 aaPredicted RBP9.52□□□□□ -0.89
CNOT2-235ENST00000552151 PCDH10Q9P2E7 1040 aa9.51□□□□□ -0.89
CNOT2-235ENST00000552151 SLC4A1APQ9BWU0 796 aaKnown RBP9.48□□□□□ -0.89
CNOT2-235ENST00000552151 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
CNOT2-235ENST00000552151 PITPNM1O00562 1244 aa9.42□□□□□ -0.9
CNOT2-235ENST00000552151 FOXD4L1Q9NU39 408 aa9.42□□□□□ -0.9
CNOT2-235ENST00000552151 C19orf67A6NJJ6 358 aa9.36□□□□□ -0.91
CNOT2-235ENST00000552151 POLA2Q14181 598 aa9.33□□□□□ -0.92
CNOT2-235ENST00000552151 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
CNOT2-235ENST00000552151 POTEIP0CG38 1075 aa9.26□□□□□ -0.93
CNOT2-235ENST00000552151 PRKAR2AP13861 404 aaKnown RBP9.2□□□□□ -0.94
CNOT2-235ENST00000552151 ATXN8OSP0DMR3 200 aa9.19□□□□□ -0.94
CNOT2-235ENST00000552151 OTUD5Q96G74 571 aa9.19□□□□□ -0.94
CNOT2-235ENST00000552151 ATF5Q9Y2D1 282 aaPredicted RBP9.19□□□□□ -0.94
CNOT2-235ENST00000552151 ZBTB22O15209 634 aa9.13□□□□□ -0.95
CNOT2-235ENST00000552151 DCBLD2Q96PD2 775 aa9.06□□□□□ -0.96
CNOT2-235ENST00000552151 OSCARQ8IYS5 282 aa9.03□□□□□ -0.96
CNOT2-235ENST00000552151 CLCN6P51797 869 aa9.02□□□□□ -0.97
CNOT2-235ENST00000552151 FBLN2P98095 1184 aa9□□□□□ -0.97
CNOT2-235ENST00000552151 EHMT2Q96KQ7 1210 aa8.97□□□□□ -0.97
CNOT2-235ENST00000552151 SPDYE2BA6NHP3 402 aa8.94□□□□□ -0.98
CNOT2-235ENST00000552151 SPDYE6P0CI01 402 aa8.94□□□□□ -0.98
CNOT2-235ENST00000552151 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
CNOT2-235ENST00000552151 POTEB2H3BUK9 544 aa8.93□□□□□ -0.98
CNOT2-235ENST00000552151 CLEC11AQ9Y240 323 aa8.88□□□□□ -0.99
CNOT2-235ENST00000552151 FAM163AQ96GL9 167 aaPredicted RBP8.88□□□□□ -0.99
CNOT2-235ENST00000552151 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
CNOT2-235ENST00000552151 CD44P16070 742 aaKnown RBP8.83□□□□□ -1
CNOT2-235ENST00000552151 CDAN1Q8IWY9 1227 aa8.82□□□□□ -1
CNOT2-235ENST00000552151 SPDYE1Q8NFV5 336 aaPredicted RBP8.82□□□□□ -1
CNOT2-235ENST00000552151 MKRN4PQ13434 485 aaPredicted RBP8.79□□□□□ -1
CNOT2-235ENST00000552151 CHADLQ6NUI6 762 aa8.79□□□□□ -1
CNOT2-235ENST00000552151 ZNF692Q9BU19 519 aaPredicted RBP8.78□□□□□ -1
CNOT2-235ENST00000552151 SSUH2Q9Y2M2 353 aa8.77□□□□□ -1.01
CNOT2-235ENST00000552151 MMRN1Q13201 1228 aa8.75□□□□□ -1.01
CNOT2-235ENST00000552151 MAMSTRQ6ZN01 415 aa8.72□□□□□ -1.01
CNOT2-235ENST00000552151 CSRNP3Q8WYN3 585 aa8.72□□□□□ -1.01
CNOT2-235ENST00000552151 PABPN1Q86U42 306 aaKnown RBP eCLIP8.63□□□□□ -1.03
CNOT2-235ENST00000552151 SPNS2Q8IVW8 549 aa8.62□□□□□ -1.03
CNOT2-235ENST00000552151 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
CNOT2-235ENST00000552151 PRR29P0C7W0 189 aa8.59□□□□□ -1.03
CNOT2-235ENST00000552151 GALR2O43603 387 aaPredicted RBP8.58□□□□□ -1.04
CNOT2-235ENST00000552151 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
CNOT2-235ENST00000552151 SCUBE2Q9NQ36 999 aa8.58□□□□□ -1.04
CNOT2-235ENST00000552151 FARP1Q9Y4F1 1045 aaPredicted RBP8.56□□□□□ -1.04
CNOT2-235ENST00000552151 ZRANB1Q9UGI0 708 aa8.53□□□□□ -1.04
CNOT2-235ENST00000552151 PELP1Q8IZL8 1130 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms