RNA–Protein interactions for RNA: ENST00000551766.5

RRN3P3-202, Transcript of RRN3 homolog, RNA polymerase I transcription factor pseudogene 3, humanhuman

TSL 2 BASIC

Gene RRN3P3, Length 3,366 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRN3P3-202ENST00000551766 NISCHQ9Y2I1 1504 aa28.95■■■□□ 2.23
RRN3P3-202ENST00000551766 DCAF8L2P0C7V8 631 aa25.8■■□□□ 1.72
RRN3P3-202ENST00000551766 SHROOM4Q9ULL8 1493 aa25.47■■□□□ 1.67
RRN3P3-202ENST00000551766 SUPT5HO00267 1087 aaKnown RBP24.91■■□□□ 1.58
RRN3P3-202ENST00000551766 CCDC180Q9P1Z9 1646 aa24.35■■□□□ 1.49
RRN3P3-202ENST00000551766 ZCCHC6Q5VYS8 1495 aaKnown RBP24.23■■□□□ 1.47
RRN3P3-202ENST00000551766 ABCC9O60706 1549 aa24.08■■□□□ 1.45
RRN3P3-202ENST00000551766 SCRIBQ14160 1630 aa23.5■■□□□ 1.35
RRN3P3-202ENST00000551766 HRCP23327 699 aa23.47■■□□□ 1.35
RRN3P3-202ENST00000551766 EHMT2Q96KQ7 1210 aa23.41■■□□□ 1.34
RRN3P3-202ENST00000551766 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
RRN3P3-202ENST00000551766 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
RRN3P3-202ENST00000551766 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
RRN3P3-202ENST00000551766 DCAF1Q9Y4B6 1507 aa23.29■■□□□ 1.32
RRN3P3-202ENST00000551766 FAM9AQ8IZU1 332 aaPredicted RBP23.23■■□□□ 1.31
RRN3P3-202ENST00000551766 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
RRN3P3-202ENST00000551766 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
RRN3P3-202ENST00000551766 LOC105371045A0A1W2PR82 267 aa23.05■■□□□ 1.28
RRN3P3-202ENST00000551766 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
RRN3P3-202ENST00000551766 NACADO15069 1562 aa22.95■■□□□ 1.26
RRN3P3-202ENST00000551766 RSF1Q96T23 1441 aaPredicted RBP22.91■■□□□ 1.26
RRN3P3-202ENST00000551766 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
RRN3P3-202ENST00000551766 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
RRN3P3-202ENST00000551766 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
RRN3P3-202ENST00000551766 TTBK1Q5TCY1 1321 aaPredicted RBP22.44■■□□□ 1.18
RRN3P3-202ENST00000551766 WIZO95785 1651 aa22.44■■□□□ 1.18
RRN3P3-202ENST00000551766 RANGAP1P46060 587 aaPredicted RBP22.35■■□□□ 1.17
RRN3P3-202ENST00000551766 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
RRN3P3-202ENST00000551766 BAZ1AQ9NRL2 1556 aaPredicted RBP22.29■■□□□ 1.16
RRN3P3-202ENST00000551766 UBTFP17480 764 aaKnown RBP22.21■■□□□ 1.15
RRN3P3-202ENST00000551766 PELP1Q8IZL8 1130 aaKnown RBP22.16■■□□□ 1.14
RRN3P3-202ENST00000551766 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
RRN3P3-202ENST00000551766 CCDC88BA6NC98 1476 aa22.08■■□□□ 1.13
RRN3P3-202ENST00000551766 UNC13AQ9UPW8 1703 aa22.07■■□□□ 1.12
RRN3P3-202ENST00000551766 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
RRN3P3-202ENST00000551766 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
RRN3P3-202ENST00000551766 ABCC8Q09428 1581 aa21.99■■□□□ 1.11
RRN3P3-202ENST00000551766 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
RRN3P3-202ENST00000551766 BAZ1BQ9UIG0 1483 aaKnown RBP21.92■■□□□ 1.1
RRN3P3-202ENST00000551766 TOP2AP11388 1531 aaKnown RBP21.9■■□□□ 1.1
RRN3P3-202ENST00000551766 CSRNP3Q8WYN3 585 aa21.86■■□□□ 1.09
RRN3P3-202ENST00000551766 ATAD2BQ9ULI0 1458 aa21.82■■□□□ 1.08
RRN3P3-202ENST00000551766 SOGA1O94964 1423 aa21.8■■□□□ 1.08
RRN3P3-202ENST00000551766 SMARCA2P51531 1590 aa21.79■■□□□ 1.08
RRN3P3-202ENST00000551766 WRNQ14191 1432 aaPredicted RBP eCLIP21.72■■□□□ 1.07
RRN3P3-202ENST00000551766 APLP2Q06481 763 aa21.68■■□□□ 1.06
RRN3P3-202ENST00000551766 RUSC2Q8N2Y8 1516 aa21.67■■□□□ 1.06
RRN3P3-202ENST00000551766 NEUROD1Q13562 356 aa21.61■■□□□ 1.05
RRN3P3-202ENST00000551766 ACIN1Q9UKV3 1341 aaKnown RBP21.6■■□□□ 1.05
RRN3P3-202ENST00000551766 ATP1B4Q9UN42 357 aaPredicted RBP21.57■■□□□ 1.04
RRN3P3-202ENST00000551766 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.54■■□□□ 1.04
RRN3P3-202ENST00000551766 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
RRN3P3-202ENST00000551766 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
RRN3P3-202ENST00000551766 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
RRN3P3-202ENST00000551766 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
RRN3P3-202ENST00000551766 GTF3C3Q9Y5Q9 886 aa21.43■■□□□ 1.02
RRN3P3-202ENST00000551766 DNAJC5BQ9UF47 199 aa21.4■■□□□ 1.02
RRN3P3-202ENST00000551766 P3H3Q8IVL6 736 aa21.38■■□□□ 1.01
RRN3P3-202ENST00000551766 NCAPD3P42695 1498 aa21.36■■□□□ 1.01
RRN3P3-202ENST00000551766 ITGAEP38570 1179 aa21.32■■□□□ 1
RRN3P3-202ENST00000551766 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
RRN3P3-202ENST00000551766 SYNJ1O43426 1573 aa21.32■■□□□ 1
RRN3P3-202ENST00000551766 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
RRN3P3-202ENST00000551766 PEG3Q9GZU2 1588 aa21.29■■□□□ 1
RRN3P3-202ENST00000551766 GOLGA3Q08378 1498 aa21.29■■□□□ 1
RRN3P3-202ENST00000551766 EEA1Q15075 1411 aa21.28■■□□□ 1
RRN3P3-202ENST00000551766 CLIP1P30622 1438 aa21.24■□□□□ 0.99
RRN3P3-202ENST00000551766 CENPBP07199 599 aaPredicted RBP21.23■□□□□ 0.99
RRN3P3-202ENST00000551766 CADPSQ9ULU8 1353 aa21.22■□□□□ 0.99
RRN3P3-202ENST00000551766 RAPGEF2Q9Y4G8 1499 aa21.2■□□□□ 0.98
RRN3P3-202ENST00000551766 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
RRN3P3-202ENST00000551766 CEP164Q9UPV0 1460 aa21.19■□□□□ 0.98
RRN3P3-202ENST00000551766 MYT1Q01538 1121 aa21.16■□□□□ 0.98
RRN3P3-202ENST00000551766 KIF27Q86VH2 1401 aa21.14■□□□□ 0.97
RRN3P3-202ENST00000551766 CUX2O14529 1486 aa21.12■□□□□ 0.97
RRN3P3-202ENST00000551766 NESP48681 1621 aa21.12■□□□□ 0.97
RRN3P3-202ENST00000551766 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
RRN3P3-202ENST00000551766 CFTRP13569 1480 aa21.08■□□□□ 0.97
RRN3P3-202ENST00000551766 ARID3CA6NKF2 412 aa21.04■□□□□ 0.96
RRN3P3-202ENST00000551766 CUX1P39880 1505 aa21.03■□□□□ 0.96
RRN3P3-202ENST00000551766 FANCD2Q9BXW9 1451 aa21■□□□□ 0.95
RRN3P3-202ENST00000551766 YTHDC1Q96MU7 727 aaKnown RBP21■□□□□ 0.95
RRN3P3-202ENST00000551766 FBLN2P98095 1184 aa20.98■□□□□ 0.95
RRN3P3-202ENST00000551766 TDRD9Q8NDG6 1382 aaKnown RBP20.98■□□□□ 0.95
RRN3P3-202ENST00000551766 CARMIL1Q5VZK9 1371 aa20.96■□□□□ 0.95
RRN3P3-202ENST00000551766 KANK4Q5T7N3 995 aaPredicted RBP20.96■□□□□ 0.95
RRN3P3-202ENST00000551766 TOP2BQ02880 1626 aa20.95■□□□□ 0.94
RRN3P3-202ENST00000551766 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
RRN3P3-202ENST00000551766 ZNF316A6NFI3 1004 aaPredicted RBP20.94■□□□□ 0.94
RRN3P3-202ENST00000551766 FAM50AQ14320 339 aaKnown RBP20.93■□□□□ 0.94
RRN3P3-202ENST00000551766 FGD5Q6ZNL6 1462 aa20.92■□□□□ 0.94
RRN3P3-202ENST00000551766 IGF1RP08069 1367 aa20.88■□□□□ 0.93
RRN3P3-202ENST00000551766 VPS8Q8N3P4 1428 aa20.86■□□□□ 0.93
RRN3P3-202ENST00000551766 MIER1Q8N108 512 aa20.85■□□□□ 0.93
RRN3P3-202ENST00000551766 PDS5BQ9NTI5 1447 aa20.77■□□□□ 0.92
RRN3P3-202ENST00000551766 KIF21BO75037 1637 aa20.75■□□□□ 0.91
RRN3P3-202ENST00000551766 PRXQ9BXM0 1461 aa20.75■□□□□ 0.91
RRN3P3-202ENST00000551766 BIVM-ERCC5R4GMW8 1640 aa20.69■□□□□ 0.9
RRN3P3-202ENST00000551766 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
RRN3P3-202ENST00000551766 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms