RNA–Protein interactions for RNA: ENST00000550993.1

ATAD2-208, Transcript of ATPase family, AAA domain containing 2, humanhuman

TSL 3

Gene ATAD2, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD2-208ENST00000550993 AEBP2Q6ZN18 517 aaPredicted RBP23.57■■□□□ 1.36
ATAD2-208ENST00000550993 CHIC1Q5VXU3 224 aa23.24■■□□□ 1.31
ATAD2-208ENST00000550993 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
ATAD2-208ENST00000550993 SENP3Q9H4L4 574 aaPredicted RBP19.76■□□□□ 0.75
ATAD2-208ENST00000550993 PLPPR3Q6T4P5 718 aa18.96■□□□□ 0.63
ATAD2-208ENST00000550993 FOXD1Q16676 465 aa18.42■□□□□ 0.54
ATAD2-208ENST00000550993 PPP6R1Q9UPN7 881 aa18.08■□□□□ 0.48
ATAD2-208ENST00000550993 ADRA2BP18089 450 aa18.05■□□□□ 0.48
ATAD2-208ENST00000550993 PIAS4Q8N2W9 510 aaPredicted RBP17.38■□□□□ 0.37
ATAD2-208ENST00000550993 KCNA4P22459 653 aa16.9■□□□□ 0.3
ATAD2-208ENST00000550993 PPP4R3CPQ6ZMV5 832 aa16.82■□□□□ 0.28
ATAD2-208ENST00000550993 MSH5O43196 834 aa16.68■□□□□ 0.26
ATAD2-208ENST00000550993 NCBP3Q53F19 620 aaKnown RBP16.36■□□□□ 0.21
ATAD2-208ENST00000550993 MAPK8IP2Q13387 824 aaPredicted RBP16.31■□□□□ 0.2
ATAD2-208ENST00000550993 SCAF1Q9H7N4 1312 aaKnown RBP16.29■□□□□ 0.2
ATAD2-208ENST00000550993 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
ATAD2-208ENST00000550993 CNKSR2Q8WXI2 1034 aa16.21■□□□□ 0.19
ATAD2-208ENST00000550993 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
ATAD2-208ENST00000550993 SLC4A1APQ9BWU0 796 aaKnown RBP16.07■□□□□ 0.16
ATAD2-208ENST00000550993 DMRT2Q9Y5R5 561 aa15.88■□□□□ 0.13
ATAD2-208ENST00000550993 RNF216Q9NWF9 866 aaPredicted RBP15.81■□□□□ 0.12
ATAD2-208ENST00000550993 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
ATAD2-208ENST00000550993 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
ATAD2-208ENST00000550993 DNAJC5BQ9UF47 199 aa15.65■□□□□ 0.1
ATAD2-208ENST00000550993 ZBTB22O15209 634 aa15.61■□□□□ 0.09
ATAD2-208ENST00000550993 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
ATAD2-208ENST00000550993 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
ATAD2-208ENST00000550993 SLC4A2P04920 1241 aa15.33■□□□□ 0.04
ATAD2-208ENST00000550993 DCAF8L1A6NGE4 600 aa15.15■□□□□ 0.02
ATAD2-208ENST00000550993 MYCNP04198 464 aaPredicted RBP14.93□□□□□ -0.02
ATAD2-208ENST00000550993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.91□□□□□ -0.02
ATAD2-208ENST00000550993 U3KPZ7 1027 aaPredicted RBP14.8□□□□□ -0.04
ATAD2-208ENST00000550993 ATXN8OSP0DMR3 200 aa14.73□□□□□ -0.05
ATAD2-208ENST00000550993 POTEDQ86YR6 584 aa14.71□□□□□ -0.05
ATAD2-208ENST00000550993 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
ATAD2-208ENST00000550993 SAMD1Q6SPF0 538 aaPredicted RBP14.55□□□□□ -0.08
ATAD2-208ENST00000550993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.54□□□□□ -0.08
ATAD2-208ENST00000550993 HNRNPUL2Q1KMD3 747 aaKnown RBP14.54□□□□□ -0.08
ATAD2-208ENST00000550993 RNF39Q9H2S5 420 aa14.43□□□□□ -0.1
ATAD2-208ENST00000550993 SPINK5Q9NQ38 1064 aaPredicted RBP14.31□□□□□ -0.12
ATAD2-208ENST00000550993 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
ATAD2-208ENST00000550993 APLP2Q06481 763 aa14.24□□□□□ -0.13
ATAD2-208ENST00000550993 C1QBPQ07021 282 aaKnown RBP14.2□□□□□ -0.14
ATAD2-208ENST00000550993 TRHP20396 242 aaPredicted RBP14.19□□□□□ -0.14
ATAD2-208ENST00000550993 FKBP8Q14318 412 aa14.17□□□□□ -0.14
ATAD2-208ENST00000550993 CAPN15O75808 1086 aa14.13□□□□□ -0.15
ATAD2-208ENST00000550993 POLA2Q14181 598 aa14.05□□□□□ -0.16
ATAD2-208ENST00000550993 MKRN4PQ13434 485 aaPredicted RBP14.04□□□□□ -0.16
ATAD2-208ENST00000550993 ABCB7O75027 752 aa13.96□□□□□ -0.17
ATAD2-208ENST00000550993 DSG3P32926 999 aa13.87□□□□□ -0.19
ATAD2-208ENST00000550993 FBLN2P98095 1184 aa13.82□□□□□ -0.2
ATAD2-208ENST00000550993 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
ATAD2-208ENST00000550993 CACNB1Q02641 598 aaPredicted RBP13.76□□□□□ -0.21
ATAD2-208ENST00000550993 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
ATAD2-208ENST00000550993 PROM2Q8N271 834 aa13.64□□□□□ -0.23
ATAD2-208ENST00000550993 CCDC180Q9P1Z9 1646 aa13.63□□□□□ -0.23
ATAD2-208ENST00000550993 RTN4Q9NQC3 1192 aaKnown RBP13.58□□□□□ -0.24
ATAD2-208ENST00000550993 OSCARQ8IYS5 282 aa13.56□□□□□ -0.24
ATAD2-208ENST00000550993 ZNF692Q9BU19 519 aaPredicted RBP13.45□□□□□ -0.26
ATAD2-208ENST00000550993 FBXO3Q9UK99 471 aa13.44□□□□□ -0.26
ATAD2-208ENST00000550993 AMER1Q5JTC6 1135 aaPredicted RBP13.43□□□□□ -0.26
ATAD2-208ENST00000550993 SPDYE2BA6NHP3 402 aa13.42□□□□□ -0.26
ATAD2-208ENST00000550993 SPDYE6P0CI01 402 aa13.42□□□□□ -0.26
ATAD2-208ENST00000550993 SPDYE2Q495Y8 402 aa13.42□□□□□ -0.26
ATAD2-208ENST00000550993 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
ATAD2-208ENST00000550993 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
ATAD2-208ENST00000550993 PABPN1Q86U42 306 aaKnown RBP eCLIP13.32□□□□□ -0.28
ATAD2-208ENST00000550993 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
ATAD2-208ENST00000550993 STAG3Q9UJ98 1225 aa13.12□□□□□ -0.31
ATAD2-208ENST00000550993 RBM42Q9BTD8 480 aaKnown RBP13.05□□□□□ -0.32
ATAD2-208ENST00000550993 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
ATAD2-208ENST00000550993 MIER1Q8N108 512 aa13.02□□□□□ -0.33
ATAD2-208ENST00000550993 PLCD3Q8N3E9 789 aa13.01□□□□□ -0.33
ATAD2-208ENST00000550993 ZCCHC6Q5VYS8 1495 aaKnown RBP13.01□□□□□ -0.33
ATAD2-208ENST00000550993 KLHL34Q8N239 644 aa13□□□□□ -0.33
ATAD2-208ENST00000550993 REM2Q8IYK8 340 aaPredicted RBP12.99□□□□□ -0.33
ATAD2-208ENST00000550993 PKD2Q13563 968 aa12.97□□□□□ -0.33
ATAD2-208ENST00000550993 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
ATAD2-208ENST00000550993 SPDYE1Q8NFV5 336 aaPredicted RBP12.93□□□□□ -0.34
ATAD2-208ENST00000550993 CLEC11AQ9Y240 323 aa12.9□□□□□ -0.34
ATAD2-208ENST00000550993 DCAF1Q9Y4B6 1507 aa12.86□□□□□ -0.35
ATAD2-208ENST00000550993 PITPNM1O00562 1244 aa12.83□□□□□ -0.36
ATAD2-208ENST00000550993 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
ATAD2-208ENST00000550993 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
ATAD2-208ENST00000550993 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
ATAD2-208ENST00000550993 ABCC9O60706 1549 aa12.77□□□□□ -0.37
ATAD2-208ENST00000550993 MNX1P50219 401 aaPredicted RBP12.76□□□□□ -0.37
ATAD2-208ENST00000550993 MYO15BQ96JP2 1530 aa12.75□□□□□ -0.37
ATAD2-208ENST00000550993 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
ATAD2-208ENST00000550993 ECM2O94769 699 aaPredicted RBP12.73□□□□□ -0.37
ATAD2-208ENST00000550993 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
ATAD2-208ENST00000550993 NUBP1P53384 320 aa12.72□□□□□ -0.37
ATAD2-208ENST00000550993 CIZ1Q9ULV3 898 aaPredicted RBP12.71□□□□□ -0.37
ATAD2-208ENST00000550993 RGL2O15211 777 aa12.68□□□□□ -0.38
ATAD2-208ENST00000550993 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
ATAD2-208ENST00000550993 NACADO15069 1562 aa12.65□□□□□ -0.38
ATAD2-208ENST00000550993 CHADLQ6NUI6 762 aa12.63□□□□□ -0.39
ATAD2-208ENST00000550993 NPM1P06748 294 aaKnown RBP eCLIP12.6□□□□□ -0.39
ATAD2-208ENST00000550993 RASEFQ8IZ41 740 aa12.6□□□□□ -0.39
ATAD2-208ENST00000550993 DCAF8Q5TAQ9 597 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms