RNA–Protein interactions for RNA: ENST00000550527.5

APAF1-209, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 6,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-209ENST00000550527 PELP1Q8IZL8 1130 aaKnown RBP8.62□□□□□ -1.03
APAF1-209ENST00000550527 MYT1Q01538 1121 aa8.61□□□□□ -1.03
APAF1-209ENST00000550527 TTBK1Q5TCY1 1321 aaPredicted RBP7.98□□□□□ -1.13
APAF1-209ENST00000550527 CENPBP07199 599 aaPredicted RBP7.92□□□□□ -1.14
APAF1-209ENST00000550527 HRCP23327 699 aa7.85□□□□□ -1.15
APAF1-209ENST00000550527 ZEB1P37275 1124 aaPredicted RBP7.83□□□□□ -1.16
APAF1-209ENST00000550527 PCGF6Q9BYE7 350 aa7.79□□□□□ -1.16
APAF1-209ENST00000550527 ERICH6Q7L0X2 663 aa7.77□□□□□ -1.17
APAF1-209ENST00000550527 CCER1Q8TC90 406 aaPredicted RBP7.7□□□□□ -1.18
APAF1-209ENST00000550527 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
APAF1-209ENST00000550527 PPARGC1BQ86YN6 1023 aaKnown RBP7.54□□□□□ -1.2
APAF1-209ENST00000550527 YTHDC1Q96MU7 727 aaKnown RBP7.49□□□□□ -1.21
APAF1-209ENST00000550527 GTF3C3Q9Y5Q9 886 aa7.49□□□□□ -1.21
APAF1-209ENST00000550527 NEFLP07196 543 aa7.47□□□□□ -1.21
APAF1-209ENST00000550527 TRIM26Q12899 539 aaPredicted RBP7.47□□□□□ -1.21
APAF1-209ENST00000550527 ACIN1Q9UKV3 1341 aaKnown RBP7.45□□□□□ -1.22
APAF1-209ENST00000550527 SCAF1Q9H7N4 1312 aaKnown RBP7.42□□□□□ -1.22
APAF1-209ENST00000550527 DCAF8L2P0C7V8 631 aa7.4□□□□□ -1.22
APAF1-209ENST00000550527 BCL11AQ9H165 835 aa7.38□□□□□ -1.23
APAF1-209ENST00000550527 NISCHQ9Y2I1 1504 aa7.37□□□□□ -1.23
APAF1-209ENST00000550527 RTL5Q5HYW3 569 aaPredicted RBP7.34□□□□□ -1.24
APAF1-209ENST00000550527 DIEXFQ68CQ4 756 aaKnown RBP7.34□□□□□ -1.24
APAF1-209ENST00000550527 MYT1LQ9UL68 1186 aa7.33□□□□□ -1.24
APAF1-209ENST00000550527 SHROOM4Q9ULL8 1493 aa7.32□□□□□ -1.24
APAF1-209ENST00000550527 ANP32EQ9BTT0 268 aa7.29□□□□□ -1.24
APAF1-209ENST00000550527 GLIPR1L2Q4G1C9 344 aa7.28□□□□□ -1.24
APAF1-209ENST00000550527 CLSPNQ9HAW4 1339 aa7.28□□□□□ -1.24
APAF1-209ENST00000550527 EHMT2Q96KQ7 1210 aa7.23□□□□□ -1.25
APAF1-209ENST00000550527 NEUROD1Q13562 356 aa7.23□□□□□ -1.25
APAF1-209ENST00000550527 EIF5BO60841 1220 aaKnown RBP7.19□□□□□ -1.26
APAF1-209ENST00000550527 APLP2Q06481 763 aa7.18□□□□□ -1.26
APAF1-209ENST00000550527 DAXXQ9UER7 740 aaPredicted RBP7.18□□□□□ -1.26
APAF1-209ENST00000550527 CDK11AQ9UQ88 783 aaPredicted RBP7.15□□□□□ -1.26
APAF1-209ENST00000550527 PRKCSHP14314 528 aaPredicted RBP7.13□□□□□ -1.27
APAF1-209ENST00000550527 FAM9AQ8IZU1 332 aaPredicted RBP7.12□□□□□ -1.27
APAF1-209ENST00000550527 BCANQ96GW7 911 aa7.11□□□□□ -1.27
APAF1-209ENST00000550527 ZNF316A6NFI3 1004 aaPredicted RBP7.1□□□□□ -1.27
APAF1-209ENST00000550527 CHIC1Q5VXU3 224 aa7.1□□□□□ -1.27
APAF1-209ENST00000550527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.07□□□□□ -1.28
APAF1-209ENST00000550527 DCAF1Q9Y4B6 1507 aa7.07□□□□□ -1.28
APAF1-209ENST00000550527 TRIM41Q8WV44 630 aa7.05□□□□□ -1.28
APAF1-209ENST00000550527 LOC105371045A0A1W2PR82 267 aa7.04□□□□□ -1.28
APAF1-209ENST00000550527 ANP32AP39687 249 aaKnown RBP7.03□□□□□ -1.28
APAF1-209ENST00000550527 SLC24A1O60721 1099 aa7.03□□□□□ -1.28
APAF1-209ENST00000550527 CSRNP3Q8WYN3 585 aa7.01□□□□□ -1.29
APAF1-209ENST00000550527 FKBP8Q14318 412 aa6.98□□□□□ -1.29
APAF1-209ENST00000550527 NBR1Q14596 966 aa6.98□□□□□ -1.29
APAF1-209ENST00000550527 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
APAF1-209ENST00000550527 CCDC180Q9P1Z9 1646 aa6.97□□□□□ -1.29
APAF1-209ENST00000550527 RANGAP1P46060 587 aaPredicted RBP6.95□□□□□ -1.3
APAF1-209ENST00000550527 DEKP35659 375 aaKnown RBP6.95□□□□□ -1.3
APAF1-209ENST00000550527 ZBTB47Q9UFB7 747 aaPredicted RBP6.92□□□□□ -1.3
APAF1-209ENST00000550527 SUPT16HQ9Y5B9 1047 aaKnown RBP6.9□□□□□ -1.3
APAF1-209ENST00000550527 RTN4Q9NQC3 1192 aaKnown RBP6.89□□□□□ -1.31
APAF1-209ENST00000550527 ANP32CO43423 234 aa6.87□□□□□ -1.31
APAF1-209ENST00000550527 MIER1Q8N108 512 aa6.87□□□□□ -1.31
APAF1-209ENST00000550527 HNRNPUL2Q1KMD3 747 aaKnown RBP6.86□□□□□ -1.31
APAF1-209ENST00000550527 TSHZ2Q9NRE2 1034 aa6.86□□□□□ -1.31
APAF1-209ENST00000550527 UBTFP17480 764 aaKnown RBP6.85□□□□□ -1.31
APAF1-209ENST00000550527 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.85□□□□□ -1.31
APAF1-209ENST00000550527 TNNT2P45379 298 aaPredicted RBP6.84□□□□□ -1.31
APAF1-209ENST00000550527 NPM2Q86SE8 214 aaKnown RBP6.84□□□□□ -1.31
APAF1-209ENST00000550527 PKNOX2Q96KN3 472 aa6.84□□□□□ -1.31
APAF1-209ENST00000550527 NOP58Q9Y2X3 529 aaKnown RBP6.84□□□□□ -1.32
APAF1-209ENST00000550527 RBM19Q9Y4C8 960 aaKnown RBP6.84□□□□□ -1.32
APAF1-209ENST00000550527 NEFMP07197 916 aa6.83□□□□□ -1.32
APAF1-209ENST00000550527 PODXL2Q9NZ53 605 aa6.82□□□□□ -1.32
APAF1-209ENST00000550527 NCLP19338 710 aaKnown RBP6.81□□□□□ -1.32
APAF1-209ENST00000550527 CCDC136Q96JN2 1154 aa6.81□□□□□ -1.32
APAF1-209ENST00000550527 ITGAEP38570 1179 aa6.81□□□□□ -1.32
APAF1-209ENST00000550527 ANP32BQ92688 251 aaKnown RBP6.8□□□□□ -1.32
APAF1-209ENST00000550527 PPM1GO15355 546 aaPredicted RBP6.8□□□□□ -1.32
APAF1-209ENST00000550527 NAP1L5Q96NT1 182 aaPredicted RBP6.8□□□□□ -1.32
APAF1-209ENST00000550527 RSPH6AQ9H0K4 717 aa6.78□□□□□ -1.32
APAF1-209ENST00000550527 ANO8Q9HCE9 1232 aaPredicted RBP6.78□□□□□ -1.32
APAF1-209ENST00000550527 DDRGK1Q96HY6 314 aa6.77□□□□□ -1.33
APAF1-209ENST00000550527 HSP90AA1P07900 732 aaKnown RBP6.77□□□□□ -1.33
APAF1-209ENST00000550527 CDK11BP21127 795 aaKnown RBP6.75□□□□□ -1.33
APAF1-209ENST00000550527 VSIG10Q8N0Z9 540 aa6.75□□□□□ -1.33
APAF1-209ENST00000550527 UBE2Q2Q8WVN8 375 aa6.75□□□□□ -1.33
APAF1-209ENST00000550527 MYO15BQ96JP2 1530 aa6.74□□□□□ -1.33
APAF1-209ENST00000550527 TRIM44Q96DX7 344 aaPredicted RBP6.74□□□□□ -1.33
APAF1-209ENST00000550527 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
APAF1-209ENST00000550527 HSP90AA2PQ14568 343 aaPredicted RBP6.7□□□□□ -1.34
APAF1-209ENST00000550527 FANCIQ9NVI1 1328 aa6.69□□□□□ -1.34
APAF1-209ENST00000550527 PPP4R2Q9NY27 417 aa6.69□□□□□ -1.34
APAF1-209ENST00000550527 SALL2Q9Y467 1007 aaPredicted RBP6.69□□□□□ -1.34
APAF1-209ENST00000550527 L1TD1Q5T7N2 865 aaKnown RBP6.68□□□□□ -1.34
APAF1-209ENST00000550527 TRIM52Q96A61 297 aa6.68□□□□□ -1.34
APAF1-209ENST00000550527 LAS1LQ9Y4W2 734 aaKnown RBP6.67□□□□□ -1.34
APAF1-209ENST00000550527 ZNF326Q5BKZ1 582 aaKnown RBP6.67□□□□□ -1.34
APAF1-209ENST00000550527 IRX6P78412 446 aaPredicted RBP6.66□□□□□ -1.34
APAF1-209ENST00000550527 POLR3GLQ9BT43 218 aa6.66□□□□□ -1.34
APAF1-209ENST00000550527 ARXQ96QS3 562 aa6.66□□□□□ -1.34
APAF1-209ENST00000550527 A0A0U1RQG5 324 aaPredicted RBP6.65□□□□□ -1.35
APAF1-209ENST00000550527 USP35Q9P2H5 1018 aa6.65□□□□□ -1.35
APAF1-209ENST00000550527 PNNQ9H307 717 aaKnown RBP6.65□□□□□ -1.35
APAF1-209ENST00000550527 UPF2Q9HAU5 1272 aaKnown RBP6.64□□□□□ -1.35
APAF1-209ENST00000550527 DDX10Q13206 875 aaKnown RBP6.63□□□□□ -1.35
APAF1-209ENST00000550527 BECN1Q14457 450 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms