RNA–Protein interactions for RNA: ENST00000550337.1

LINC02402-201, Transcript of long intergenic non-protein coding RNA 2402, humanhuman

TSL 1 (best) BASIC

Gene LINC02402, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02402-201ENST00000550337 AEBP2Q6ZN18 517 aaPredicted RBP27.38■■□□□ 1.97
LINC02402-201ENST00000550337 CHIC1Q5VXU3 224 aa25.42■■□□□ 1.66
LINC02402-201ENST00000550337 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
LINC02402-201ENST00000550337 POTEDQ86YR6 584 aa23.28■■□□□ 1.32
LINC02402-201ENST00000550337 PHF23Q9BUL5 403 aaPredicted RBP23■■□□□ 1.27
LINC02402-201ENST00000550337 FOXD1Q16676 465 aa22.14■■□□□ 1.13
LINC02402-201ENST00000550337 MSH5O43196 834 aa21.19■□□□□ 0.98
LINC02402-201ENST00000550337 PIAS4Q8N2W9 510 aaPredicted RBP20.29■□□□□ 0.84
LINC02402-201ENST00000550337 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
LINC02402-201ENST00000550337 ADRA2BP18089 450 aa19.43■□□□□ 0.7
LINC02402-201ENST00000550337 CACNB1Q02641 598 aaPredicted RBP19.11■□□□□ 0.65
LINC02402-201ENST00000550337 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
LINC02402-201ENST00000550337 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
LINC02402-201ENST00000550337 MAPK8IP2Q13387 824 aaPredicted RBP18.31■□□□□ 0.52
LINC02402-201ENST00000550337 RNF39Q9H2S5 420 aa18■□□□□ 0.47
LINC02402-201ENST00000550337 POTEHQ6S545 545 aa17.93■□□□□ 0.46
LINC02402-201ENST00000550337 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
LINC02402-201ENST00000550337 SCAF1Q9H7N4 1312 aaKnown RBP17.63■□□□□ 0.41
LINC02402-201ENST00000550337 C1QBPQ07021 282 aaKnown RBP17.6■□□□□ 0.41
LINC02402-201ENST00000550337 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
LINC02402-201ENST00000550337 DNAJC5BQ9UF47 199 aa16.79■□□□□ 0.28
LINC02402-201ENST00000550337 RNF216Q9NWF9 866 aaPredicted RBP16.6■□□□□ 0.25
LINC02402-201ENST00000550337 DSG3P32926 999 aa16.37■□□□□ 0.21
LINC02402-201ENST00000550337 PPP4R3CPQ6ZMV5 832 aa16.37■□□□□ 0.21
LINC02402-201ENST00000550337 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
LINC02402-201ENST00000550337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.3■□□□□ 0.2
LINC02402-201ENST00000550337 SP7Q8TDD2 431 aaPredicted RBP16.1■□□□□ 0.17
LINC02402-201ENST00000550337 SPINK5Q9NQ38 1064 aaPredicted RBP16.1■□□□□ 0.17
LINC02402-201ENST00000550337 CAPN15O75808 1086 aa16.08■□□□□ 0.16
LINC02402-201ENST00000550337 CHRDL2Q6WN34 429 aa15.88■□□□□ 0.13
LINC02402-201ENST00000550337 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
LINC02402-201ENST00000550337 KCNA4P22459 653 aa15.67■□□□□ 0.1
LINC02402-201ENST00000550337 ABCB7O75027 752 aa15.63■□□□□ 0.09
LINC02402-201ENST00000550337 RBM42Q9BTD8 480 aaKnown RBP15.56■□□□□ 0.08
LINC02402-201ENST00000550337 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
LINC02402-201ENST00000550337 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
LINC02402-201ENST00000550337 PLSCR2Q9NRY7 297 aa15.38■□□□□ 0.05
LINC02402-201ENST00000550337 ZNF219Q9P2Y4 722 aaPredicted RBP15.34■□□□□ 0.05
LINC02402-201ENST00000550337 HAX1O00165 279 aa15.29■□□□□ 0.04
LINC02402-201ENST00000550337 NPM3O75607 178 aaKnown RBP15.26■□□□□ 0.03
LINC02402-201ENST00000550337 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
LINC02402-201ENST00000550337 EVX2Q03828 476 aa15.1■□□□□ 0.01
LINC02402-201ENST00000550337 APLP2Q06481 763 aa15.09■□□□□ 0.01
LINC02402-201ENST00000550337 LHX8Q68G74 356 aa15.08■□□□□ 0
LINC02402-201ENST00000550337 SLC4A1APQ9BWU0 796 aaKnown RBP14.96□□□□□ -0.01
LINC02402-201ENST00000550337 AKT1S1Q96B36 256 aa14.92□□□□□ -0.02
LINC02402-201ENST00000550337 FXR2P51116 673 aaKnown RBP eCLIP14.86□□□□□ -0.03
LINC02402-201ENST00000550337 SLC4A2P04920 1241 aa14.84□□□□□ -0.03
LINC02402-201ENST00000550337 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
LINC02402-201ENST00000550337 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.76□□□□□ -0.05
LINC02402-201ENST00000550337 HNRNPUL2Q1KMD3 747 aaKnown RBP14.76□□□□□ -0.05
LINC02402-201ENST00000550337 POLA2Q14181 598 aa14.73□□□□□ -0.05
LINC02402-201ENST00000550337 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
LINC02402-201ENST00000550337 EHMT2Q96KQ7 1210 aa14.71□□□□□ -0.05
LINC02402-201ENST00000550337 SAMD1Q6SPF0 538 aaPredicted RBP14.65□□□□□ -0.06
LINC02402-201ENST00000550337 GABBR2O75899 941 aa14.59□□□□□ -0.07
LINC02402-201ENST00000550337 CSRNP3Q8WYN3 585 aa14.47□□□□□ -0.09
LINC02402-201ENST00000550337 C19orf67A6NJJ6 358 aa14.44□□□□□ -0.1
LINC02402-201ENST00000550337 ZBTB22O15209 634 aa14.44□□□□□ -0.1
LINC02402-201ENST00000550337 FOXD4L1Q9NU39 408 aa14.39□□□□□ -0.11
LINC02402-201ENST00000550337 OSCARQ8IYS5 282 aa14.35□□□□□ -0.11
LINC02402-201ENST00000550337 POTEIP0CG38 1075 aa14.34□□□□□ -0.11
LINC02402-201ENST00000550337 POTEMA6NI47 508 aa14.3□□□□□ -0.12
LINC02402-201ENST00000550337 PRKAR2AP13861 404 aaKnown RBP14.29□□□□□ -0.12
LINC02402-201ENST00000550337 ZBTB12Q9Y330 459 aaPredicted RBP14.22□□□□□ -0.13
LINC02402-201ENST00000550337 POTEGQ6S5H5 508 aa14.19□□□□□ -0.14
LINC02402-201ENST00000550337 MYCNP04198 464 aaPredicted RBP14.11□□□□□ -0.15
LINC02402-201ENST00000550337 OTUD5Q96G74 571 aa14.06□□□□□ -0.16
LINC02402-201ENST00000550337 PCDH10Q9P2E7 1040 aa14.04□□□□□ -0.16
LINC02402-201ENST00000550337 CLEC11AQ9Y240 323 aa13.91□□□□□ -0.18
LINC02402-201ENST00000550337 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
LINC02402-201ENST00000550337 CHADLQ6NUI6 762 aa13.86□□□□□ -0.19
LINC02402-201ENST00000550337 ATF5Q9Y2D1 282 aaPredicted RBP13.86□□□□□ -0.19
LINC02402-201ENST00000550337 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
LINC02402-201ENST00000550337 DCBLD2Q96PD2 775 aa13.84□□□□□ -0.19
LINC02402-201ENST00000550337 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
LINC02402-201ENST00000550337 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
LINC02402-201ENST00000550337 CLCN6P51797 869 aa13.72□□□□□ -0.21
LINC02402-201ENST00000550337 SPDYE2BA6NHP3 402 aa13.7□□□□□ -0.22
LINC02402-201ENST00000550337 SPDYE6P0CI01 402 aa13.7□□□□□ -0.22
LINC02402-201ENST00000550337 SPDYE2Q495Y8 402 aa13.7□□□□□ -0.22
LINC02402-201ENST00000550337 LCE2DQ5TA82 110 aaPredicted RBP13.68□□□□□ -0.22
LINC02402-201ENST00000550337 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
LINC02402-201ENST00000550337 FAM163AQ96GL9 167 aaPredicted RBP13.46□□□□□ -0.25
LINC02402-201ENST00000550337 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
LINC02402-201ENST00000550337 FARP1Q9Y4F1 1045 aaPredicted RBP13.45□□□□□ -0.26
LINC02402-201ENST00000550337 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
LINC02402-201ENST00000550337 POTEJP0CG39 1038 aa13.41□□□□□ -0.26
LINC02402-201ENST00000550337 SSUH2Q9Y2M2 353 aa13.41□□□□□ -0.26
LINC02402-201ENST00000550337 CDAN1Q8IWY9 1227 aa13.35□□□□□ -0.27
LINC02402-201ENST00000550337 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
LINC02402-201ENST00000550337 ZNF692Q9BU19 519 aaPredicted RBP13.32□□□□□ -0.28
LINC02402-201ENST00000550337 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
LINC02402-201ENST00000550337 FBLN2P98095 1184 aa13.26□□□□□ -0.29
LINC02402-201ENST00000550337 MAMSTRQ6ZN01 415 aa13.22□□□□□ -0.29
LINC02402-201ENST00000550337 METRNQ9UJH8 293 aa13.21□□□□□ -0.29
LINC02402-201ENST00000550337 MMRN1Q13201 1228 aa13.2□□□□□ -0.3
LINC02402-201ENST00000550337 MKRN4PQ13434 485 aaPredicted RBP13.13□□□□□ -0.31
LINC02402-201ENST00000550337 PABPN1Q86U42 306 aaKnown RBP eCLIP13.1□□□□□ -0.31
LINC02402-201ENST00000550337 SCUBE2Q9NQ36 999 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms