RNA–Protein interactions for RNA: ENST00000550010.5

CCT2-208, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 5

Gene CCT2, Length 1,754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-208ENST00000550010 DDX3XO00571 662 aaKnown RBP eCLIP9.04□□□□□ -0.961e-27■■□□□ 12
CCT2-208ENST00000550010 NOLC1Q14978 699 aaKnown RBP eCLIP9.29□□□□□ -0.924e-16■■■□□ 17.3
CCT2-208ENST00000550010 SF3B1O75533 1304 aaKnown RBP eCLIP9.08□□□□□ -0.962e-15■■■■■ 294.1
CCT2-208ENST00000550010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.348e-15■■■□□ 15.6
CCT2-208ENST00000550010 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.56□□□□□ -1.045e-14■■■□□ 16.2
CCT2-208ENST00000550010 PABPC4Q13310 644 aaKnown RBP eCLIP9.83□□□□□ -0.842e-13■■□□□ 12.6
CCT2-208ENST00000550010 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.16□□□□□ -0.941e-10■■■■■ 90
CCT2-208ENST00000550010 KHSRPQ92945 711 aaKnown RBP eCLIP9.04□□□□□ -0.961e-10■■■■□ 21.7
CCT2-208ENST00000550010 FXR2P51116 673 aaKnown RBP eCLIP9.95□□□□□ -0.824e-8■■□□□ 12.3
CCT2-208ENST00000550010 QKIQ96PU8 341 aaKnown RBP eCLIP8.72□□□□□ -1.014e-8■■■■■ 31.8
CCT2-208ENST00000550010 YBX3P16989 372 aaKnown RBP eCLIP10.23□□□□□ -0.777e-8■□□□□ 11.1
CCT2-208ENST00000550010 GPKOWQ92917 476 aaPredicted RBP eCLIP9.8□□□□□ -0.841e-7■■□□□ 12.9
CCT2-208ENST00000550010 U2AF2P26368 475 aaKnown RBP eCLIP9.76□□□□□ -0.852e-7■■□□□ 12.8
CCT2-208ENST00000550010 SMNDC1O75940 238 aaKnown RBP eCLIP7.56□□□□□ -1.23e-7■□□□□ 10.4
CCT2-208ENST00000550010 SND1Q7KZF4 910 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■■■■□ 23.1
CCT2-208ENST00000550010 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.12□□□□□ -0.954e-7■■□□□ 13.2
CCT2-208ENST00000550010 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.77□□□□□ -1.334e-7■■■■■ 37.6
CCT2-208ENST00000550010 SUB1P53999 127 aaKnown RBP eCLIP6.75□□□□□ -1.334e-7■■■■■ 175.4
CCT2-208ENST00000550010 AARSP49588 968 aaKnown RBP eCLIP9.09□□□□□ -0.955e-7■■■■■ 27.5
CCT2-208ENST00000550010 PPIGQ13427 754 aaKnown RBP eCLIP9.2□□□□□ -0.945e-7■□□□□ 9.6
CCT2-208ENST00000550010 RPS3P23396 243 aaKnown RBP eCLIP8.43□□□□□ -1.065e-7■■■■□ 21.9
CCT2-208ENST00000550010 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■□ 24.4
CCT2-208ENST00000550010 EFTUD2Q15029 972 aaKnown RBP eCLIP8.48□□□□□ -1.059e-7■■■■□ 23.4
CCT2-208ENST00000550010 SF3B4Q15427 424 aaKnown RBP eCLIP7.64□□□□□ -1.191e-6■■■■□ 24.6
CCT2-208ENST00000550010 FMR1Q06787 632 aaKnown RBP eCLIP9.88□□□□□ -0.831e-6■■■■□ 21.6
CCT2-208ENST00000550010 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.31□□□□□ -0.761e-6■■□□□ 12.5
CCT2-208ENST00000550010 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.16□□□□□ -0.621e-6■■■□□ 15.5
CCT2-208ENST00000550010 G3BP1Q13283 466 aaKnown RBP eCLIP10.56□□□□□ -0.721e-6■■■□□ 15.6
CCT2-208ENST00000550010 HNRNPKP61978 463 aaKnown RBP eCLIP8.33□□□□□ -1.082e-6■■■■□ 21.1
CCT2-208ENST00000550010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.354e-6■■■■■ 30.2
CCT2-208ENST00000550010 RBM22Q9NW64 420 aaKnown RBP eCLIP8.69□□□□□ -1.027e-6■□□□□ 8.3
Retrieved 31 of 31 RNA–protein pairs in 8.5 ms