RNA–Protein interactions for RNA: ENST00000550010.5

CCT2-208, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 5

Gene CCT2, Length 1,754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-208ENST00000550010 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
CCT2-208ENST00000550010 CHIC1Q5VXU3 224 aa18.98■□□□□ 0.63
CCT2-208ENST00000550010 AEBP2Q6ZN18 517 aaPredicted RBP18.82■□□□□ 0.6
CCT2-208ENST00000550010 CCDC180Q9P1Z9 1646 aa17.3■□□□□ 0.36
CCT2-208ENST00000550010 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
CCT2-208ENST00000550010 ABCC9O60706 1549 aa16.63■□□□□ 0.25
CCT2-208ENST00000550010 ZCCHC6Q5VYS8 1495 aaKnown RBP16.49■□□□□ 0.23
CCT2-208ENST00000550010 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
CCT2-208ENST00000550010 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
CCT2-208ENST00000550010 MYO15BQ96JP2 1530 aa16.25■□□□□ 0.19
CCT2-208ENST00000550010 NACADO15069 1562 aa16.23■□□□□ 0.19
CCT2-208ENST00000550010 RB1CC1Q8TDY2 1594 aa16.15■□□□□ 0.18
CCT2-208ENST00000550010 SHROOM4Q9ULL8 1493 aa15.9■□□□□ 0.14
CCT2-208ENST00000550010 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
CCT2-208ENST00000550010 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.11
CCT2-208ENST00000550010 PLPPR3Q6T4P5 718 aa15.71■□□□□ 0.11
CCT2-208ENST00000550010 UNC13AQ9UPW8 1703 aa15.67■□□□□ 0.1
CCT2-208ENST00000550010 PABPN1Q86U42 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
CCT2-208ENST00000550010 BICRAQ9NZM4 1560 aa15.59■□□□□ 0.09
CCT2-208ENST00000550010 CECR2Q9BXF3 1484 aa15.32■□□□□ 0.04
CCT2-208ENST00000550010 BAZ1AQ9NRL2 1556 aaPredicted RBP15.26■□□□□ 0.03
CCT2-208ENST00000550010 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.02
CCT2-208ENST00000550010 RSF1Q96T23 1441 aaPredicted RBP15.2■□□□□ 0.02
CCT2-208ENST00000550010 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
CCT2-208ENST00000550010 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
CCT2-208ENST00000550010 EIF4G1Q04637 1599 aaKnown RBP15.18■□□□□ 0.02
CCT2-208ENST00000550010 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0.01
CCT2-208ENST00000550010 SMARCA2P51531 1590 aa15.05■□□□□ -0
CCT2-208ENST00000550010 ATAD2BQ9ULI0 1458 aa15.04■□□□□ -0
CCT2-208ENST00000550010 WIZO95785 1651 aa15.04■□□□□ -0
CCT2-208ENST00000550010 PEG3Q9GZU2 1588 aa15.03■□□□□ -0
CCT2-208ENST00000550010 CC2D2AQ9P2K1 1620 aa15.02□□□□□ -0.01
CCT2-208ENST00000550010 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
CCT2-208ENST00000550010 BAZ1BQ9UIG0 1483 aaKnown RBP14.96□□□□□ -0.01
CCT2-208ENST00000550010 TOP2AP11388 1531 aaKnown RBP14.92□□□□□ -0.02
CCT2-208ENST00000550010 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
CCT2-208ENST00000550010 DNAJC5BQ9UF47 199 aa14.9□□□□□ -0.02
CCT2-208ENST00000550010 ADRA2BP18089 450 aa14.8□□□□□ -0.04
CCT2-208ENST00000550010 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.05
CCT2-208ENST00000550010 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
CCT2-208ENST00000550010 SLC24A1O60721 1099 aa14.62□□□□□ -0.07
CCT2-208ENST00000550010 FOXD1Q16676 465 aa14.6□□□□□ -0.07
CCT2-208ENST00000550010 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
CCT2-208ENST00000550010 CFTRP13569 1480 aa14.57□□□□□ -0.08
CCT2-208ENST00000550010 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
CCT2-208ENST00000550010 KCNA4P22459 653 aa14.49□□□□□ -0.09
CCT2-208ENST00000550010 NESP48681 1621 aa14.48□□□□□ -0.09
CCT2-208ENST00000550010 PDS5BQ9NTI5 1447 aa14.45□□□□□ -0.1
CCT2-208ENST00000550010 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
CCT2-208ENST00000550010 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
CCT2-208ENST00000550010 CEP164Q9UPV0 1460 aa14.36□□□□□ -0.11
CCT2-208ENST00000550010 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
CCT2-208ENST00000550010 ERCC6Q03468 1493 aa14.34□□□□□ -0.11
CCT2-208ENST00000550010 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
CCT2-208ENST00000550010 ABCC8Q09428 1581 aa14.32□□□□□ -0.12
CCT2-208ENST00000550010 KIF21AQ7Z4S6 1674 aa14.27□□□□□ -0.13
CCT2-208ENST00000550010 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
CCT2-208ENST00000550010 MRC2Q9UBG0 1479 aa14.24□□□□□ -0.13
CCT2-208ENST00000550010 CUX1P39880 1505 aa14.23□□□□□ -0.13
CCT2-208ENST00000550010 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
CCT2-208ENST00000550010 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.13
CCT2-208ENST00000550010 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
CCT2-208ENST00000550010 TOP2BQ02880 1626 aa14.21□□□□□ -0.13
CCT2-208ENST00000550010 TOPBP1Q92547 1522 aa14.2□□□□□ -0.14
CCT2-208ENST00000550010 BIVM-ERCC5R4GMW8 1640 aa14.18□□□□□ -0.14
CCT2-208ENST00000550010 WDR62O43379 1518 aa14.15□□□□□ -0.14
CCT2-208ENST00000550010 FGD5Q6ZNL6 1462 aa14.14□□□□□ -0.15
CCT2-208ENST00000550010 THOC2Q8NI27 1593 aaKnown RBP14.12□□□□□ -0.15
CCT2-208ENST00000550010 SOGA1O94964 1423 aa14.11□□□□□ -0.15
CCT2-208ENST00000550010 POLA1P09884 1462 aaPredicted RBP14.11□□□□□ -0.15
CCT2-208ENST00000550010 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
CCT2-208ENST00000550010 IFT140Q96RY7 1462 aa14.05□□□□□ -0.16
CCT2-208ENST00000550010 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
CCT2-208ENST00000550010 CUX2O14529 1486 aa14.03□□□□□ -0.16
CCT2-208ENST00000550010 KIF27Q86VH2 1401 aa14.03□□□□□ -0.16
CCT2-208ENST00000550010 EEA1Q15075 1411 aa14.02□□□□□ -0.16
CCT2-208ENST00000550010 ABCA10Q8WWZ4 1543 aa14.02□□□□□ -0.17
CCT2-208ENST00000550010 TDRD9Q8NDG6 1382 aaKnown RBP13.98□□□□□ -0.17
CCT2-208ENST00000550010 TARBP1Q13395 1621 aaKnown RBP13.98□□□□□ -0.17
CCT2-208ENST00000550010 RUSC2Q8N2Y8 1516 aa13.97□□□□□ -0.17
CCT2-208ENST00000550010 PPP4R3CPQ6ZMV5 832 aa13.96□□□□□ -0.17
CCT2-208ENST00000550010 POTEDQ86YR6 584 aa13.95□□□□□ -0.18
CCT2-208ENST00000550010 PIAS4Q8N2W9 510 aaPredicted RBP13.95□□□□□ -0.18
CCT2-208ENST00000550010 SLC4A1APQ9BWU0 796 aaKnown RBP13.95□□□□□ -0.18
CCT2-208ENST00000550010 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
CCT2-208ENST00000550010 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
CCT2-208ENST00000550010 AQRO60306 1485 aaKnown RBP eCLIP13.92□□□□□ -0.186e-7■■■■□ 24.4
CCT2-208ENST00000550010 ZNF608Q9ULD9 1512 aaPredicted RBP13.91□□□□□ -0.18
CCT2-208ENST00000550010 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
CCT2-208ENST00000550010 IGF1RP08069 1367 aa13.91□□□□□ -0.18
CCT2-208ENST00000550010 ABCA5Q8WWZ7 1642 aa13.88□□□□□ -0.19
CCT2-208ENST00000550010 GRIN2BQ13224 1484 aa13.88□□□□□ -0.19
CCT2-208ENST00000550010 ERICH3Q5RHP9 1530 aa13.86□□□□□ -0.19
CCT2-208ENST00000550010 CARMIL1Q5VZK9 1371 aa13.85□□□□□ -0.19
CCT2-208ENST00000550010 EIF4G3O43432 1585 aaKnown RBP13.85□□□□□ -0.19
CCT2-208ENST00000550010 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
CCT2-208ENST00000550010 PRXQ9BXM0 1461 aa13.82□□□□□ -0.2
CCT2-208ENST00000550010 UBTFP17480 764 aaKnown RBP13.8□□□□□ -0.2
CCT2-208ENST00000550010 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
CCT2-208ENST00000550010 PBRM1Q86U86 1689 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms