RNA–Protein interactions for RNA: ENST00000549648.5

WDR90-216, Transcript of WD repeat domain 90, humanhuman

TSL 1 (best)

Gene WDR90, Length 2,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-216ENST00000549648 NISCHQ9Y2I1 1504 aa38.48■■■■□ 3.75
WDR90-216ENST00000549648 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
WDR90-216ENST00000549648 ZCCHC6Q5VYS8 1495 aaKnown RBP32.52■■■□□ 2.8
WDR90-216ENST00000549648 SHROOM4Q9ULL8 1493 aa32.16■■■□□ 2.74
WDR90-216ENST00000549648 DCAF1Q9Y4B6 1507 aa31.8■■■□□ 2.68
WDR90-216ENST00000549648 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
WDR90-216ENST00000549648 DCAF8L2P0C7V8 631 aa31.54■■■□□ 2.64
WDR90-216ENST00000549648 ABCC9O60706 1549 aa31.41■■■□□ 2.62
WDR90-216ENST00000549648 MYO15BQ96JP2 1530 aa31.04■■■□□ 2.56
WDR90-216ENST00000549648 HRCP23327 699 aa30.94■■■□□ 2.54
WDR90-216ENST00000549648 CHIC1Q5VXU3 224 aa30.73■■■□□ 2.51
WDR90-216ENST00000549648 SCRIBQ14160 1630 aa30.55■■■□□ 2.48
WDR90-216ENST00000549648 NACADO15069 1562 aa30.55■■■□□ 2.48
WDR90-216ENST00000549648 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
WDR90-216ENST00000549648 PCGF6Q9BYE7 350 aa30.27■■■□□ 2.44
WDR90-216ENST00000549648 RB1CC1Q8TDY2 1594 aa30.18■■■□□ 2.42
WDR90-216ENST00000549648 PPARGC1BQ86YN6 1023 aaKnown RBP29.91■■■□□ 2.38
WDR90-216ENST00000549648 PELP1Q8IZL8 1130 aaKnown RBP29.85■■■□□ 2.37
WDR90-216ENST00000549648 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
WDR90-216ENST00000549648 MROH2BQ7Z745 1585 aa29.77■■■□□ 2.36
WDR90-216ENST00000549648 LOC105371045A0A1W2PR82 267 aa29.77■■■□□ 2.36
WDR90-216ENST00000549648 TRIM26Q12899 539 aaPredicted RBP29.73■■■□□ 2.35
WDR90-216ENST00000549648 UNC13AQ9UPW8 1703 aa29.66■■■□□ 2.34
WDR90-216ENST00000549648 BAZ1AQ9NRL2 1556 aaPredicted RBP29.62■■■□□ 2.33
WDR90-216ENST00000549648 WIZO95785 1651 aa29.57■■■□□ 2.32
WDR90-216ENST00000549648 PABPN1Q86U42 306 aaKnown RBP eCLIP29.53■■■□□ 2.32
WDR90-216ENST00000549648 ZEB1P37275 1124 aaPredicted RBP29.53■■■□□ 2.32
WDR90-216ENST00000549648 TRIM41Q8WV44 630 aa29.52■■■□□ 2.32
WDR90-216ENST00000549648 SMARCA4P51532 1647 aa29.34■■■□□ 2.29
WDR90-216ENST00000549648 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
WDR90-216ENST00000549648 TOP2AP11388 1531 aaKnown RBP29.28■■■□□ 2.28
WDR90-216ENST00000549648 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
WDR90-216ENST00000549648 FAM9AQ8IZU1 332 aaPredicted RBP29.15■■■□□ 2.26
WDR90-216ENST00000549648 CCDC88BA6NC98 1476 aa29.04■■■□□ 2.24
WDR90-216ENST00000549648 SMARCA2P51531 1590 aa29.04■■■□□ 2.24
WDR90-216ENST00000549648 PEG3Q9GZU2 1588 aa28.95■■■□□ 2.22
WDR90-216ENST00000549648 EHMT2Q96KQ7 1210 aa28.87■■■□□ 2.21
WDR90-216ENST00000549648 MYT1Q01538 1121 aa28.87■■■□□ 2.21
WDR90-216ENST00000549648 SCAF1Q9H7N4 1312 aaKnown RBP28.84■■■□□ 2.21
WDR90-216ENST00000549648 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
WDR90-216ENST00000549648 ATAD2BQ9ULI0 1458 aa28.65■■■□□ 2.18
WDR90-216ENST00000549648 EEA1Q15075 1411 aa28.59■■■□□ 2.17
WDR90-216ENST00000549648 BAZ1BQ9UIG0 1483 aaKnown RBP28.53■■■□□ 2.16
WDR90-216ENST00000549648 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
WDR90-216ENST00000549648 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
WDR90-216ENST00000549648 SOGA1O94964 1423 aa28.45■■■□□ 2.15
WDR90-216ENST00000549648 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
WDR90-216ENST00000549648 CSRNP3Q8WYN3 585 aa28.37■■■□□ 2.13
WDR90-216ENST00000549648 TNIKQ9UKE5 1360 aa28.36■■■□□ 2.13
WDR90-216ENST00000549648 CC2D2AQ9P2K1 1620 aa28.34■■■□□ 2.13
WDR90-216ENST00000549648 CEP162Q5TB80 1403 aa28.28■■■□□ 2.12
WDR90-216ENST00000549648 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
WDR90-216ENST00000549648 SYNJ1O43426 1573 aa28.27■■■□□ 2.12
WDR90-216ENST00000549648 CCER1Q8TC90 406 aaPredicted RBP28.25■■■□□ 2.11
WDR90-216ENST00000549648 HMGXB3Q12766 1538 aa28.23■■■□□ 2.11
WDR90-216ENST00000549648 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
WDR90-216ENST00000549648 GOLGA3Q08378 1498 aa28.23■■■□□ 2.11
WDR90-216ENST00000549648 CENPBP07199 599 aaPredicted RBP28.22■■■□□ 2.11
WDR90-216ENST00000549648 NEUROD1Q13562 356 aa28.21■■■□□ 2.11
WDR90-216ENST00000549648 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.19■■■□□ 2.1
WDR90-216ENST00000549648 DIEXFQ68CQ4 756 aaKnown RBP28.14■■■□□ 2.09
WDR90-216ENST00000549648 CEP164Q9UPV0 1460 aa28.13■■■□□ 2.09
WDR90-216ENST00000549648 KIF21BO75037 1637 aa28.12■■■□□ 2.09
WDR90-216ENST00000549648 UBTFP17480 764 aaKnown RBP28.1■■■□□ 2.09
WDR90-216ENST00000549648 TOP2BQ02880 1626 aa28.08■■■□□ 2.08
WDR90-216ENST00000549648 GTF3C3Q9Y5Q9 886 aa28.02■■■□□ 2.08
WDR90-216ENST00000549648 BIVM-ERCC5R4GMW8 1640 aa28.01■■■□□ 2.07
WDR90-216ENST00000549648 TTBK1Q5TCY1 1321 aaPredicted RBP28■■■□□ 2.07
WDR90-216ENST00000549648 CFTRP13569 1480 aa27.89■■■□□ 2.05
WDR90-216ENST00000549648 CLIP1P30622 1438 aa27.83■■■□□ 2.04
WDR90-216ENST00000549648 RAPGEF2Q9Y4G8 1499 aa27.82■■■□□ 2.04
WDR90-216ENST00000549648 ZNF316A6NFI3 1004 aaPredicted RBP27.8■■■□□ 2.04
WDR90-216ENST00000549648 CUX1P39880 1505 aa27.77■■■□□ 2.04
WDR90-216ENST00000549648 ERICH3Q5RHP9 1530 aa27.76■■■□□ 2.03
WDR90-216ENST00000549648 VPS8Q8N3P4 1428 aa27.73■■■□□ 2.03
WDR90-216ENST00000549648 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
WDR90-216ENST00000549648 PRDM2Q13029 1718 aa27.7■■■□□ 2.03
WDR90-216ENST00000549648 KIF27Q86VH2 1401 aa27.65■■■□□ 2.02
WDR90-216ENST00000549648 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
WDR90-216ENST00000549648 APLP2Q06481 763 aa27.52■■■□□ 2
WDR90-216ENST00000549648 HNRNPUL2Q1KMD3 747 aaKnown RBP27.43■■□□□ 1.98
WDR90-216ENST00000549648 RANGAP1P46060 587 aaPredicted RBP27.41■■□□□ 1.98
WDR90-216ENST00000549648 ARAP1Q96P48 1450 aa27.41■■□□□ 1.98
WDR90-216ENST00000549648 MIER1Q8N108 512 aa27.38■■□□□ 1.97
WDR90-216ENST00000549648 CUX2O14529 1486 aa27.34■■□□□ 1.97
WDR90-216ENST00000549648 NESP48681 1621 aa27.33■■□□□ 1.97
WDR90-216ENST00000549648 CLSPNQ9HAW4 1339 aa27.33■■□□□ 1.97
WDR90-216ENST00000549648 IGF1RP08069 1367 aa27.33■■□□□ 1.97
WDR90-216ENST00000549648 YTHDC1Q96MU7 727 aaKnown RBP27.32■■□□□ 1.96
WDR90-216ENST00000549648 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
WDR90-216ENST00000549648 FANCD2Q9BXW9 1451 aa27.28■■□□□ 1.96
WDR90-216ENST00000549648 ARHGAP35Q9NRY4 1499 aa27.23■■□□□ 1.95
WDR90-216ENST00000549648 CARMIL1Q5VZK9 1371 aa27.19■■□□□ 1.94
WDR90-216ENST00000549648 DNMBPQ6XZF7 1577 aa27.19■■□□□ 1.94
WDR90-216ENST00000549648 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
WDR90-216ENST00000549648 ABCA10Q8WWZ4 1543 aa27.1■■□□□ 1.93
WDR90-216ENST00000549648 KANK4Q5T7N3 995 aaPredicted RBP27.1■■□□□ 1.93
WDR90-216ENST00000549648 TOPBP1Q92547 1522 aa27.09■■□□□ 1.93
WDR90-216ENST00000549648 RRBP1Q9P2E9 1410 aaKnown RBP27.08■■□□□ 1.93
WDR90-216ENST00000549648 MAP3K1Q13233 1512 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 257 ms