RNA–Protein interactions for RNA: ENST00000549446.5

KCNC2-208, Transcript of potassium voltage-gated channel subfamily C member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene KCNC2, Length 5,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC2-208ENST00000549446 NISCHQ9Y2I1 1504 aa27.95■■■□□ 2.06
KCNC2-208ENST00000549446 DCAF8L2P0C7V8 631 aa27.11■■□□□ 1.93
KCNC2-208ENST00000549446 SUPT5HO00267 1087 aaKnown RBP25.78■■□□□ 1.72
KCNC2-208ENST00000549446 SHROOM4Q9ULL8 1493 aa25.7■■□□□ 1.7
KCNC2-208ENST00000549446 EHMT2Q96KQ7 1210 aa24.43■■□□□ 1.5
KCNC2-208ENST00000549446 APLP2Q06481 763 aa24.16■■□□□ 1.46
KCNC2-208ENST00000549446 FAM9AQ8IZU1 332 aaPredicted RBP24.15■■□□□ 1.46
KCNC2-208ENST00000549446 TRIM41Q8WV44 630 aa24.08■■□□□ 1.44
KCNC2-208ENST00000549446 PELP1Q8IZL8 1130 aaKnown RBP23.94■■□□□ 1.42
KCNC2-208ENST00000549446 ABCC9O60706 1549 aa23.68■■□□□ 1.38
KCNC2-208ENST00000549446 PCGF6Q9BYE7 350 aa23.68■■□□□ 1.38
KCNC2-208ENST00000549446 UBTFP17480 764 aaKnown RBP23.59■■□□□ 1.37
KCNC2-208ENST00000549446 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.37
KCNC2-208ENST00000549446 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
KCNC2-208ENST00000549446 ZEB1P37275 1124 aaPredicted RBP23.41■■□□□ 1.34
KCNC2-208ENST00000549446 CHIC1Q5VXU3 224 aa23.37■■□□□ 1.33
KCNC2-208ENST00000549446 CCDC180Q9P1Z9 1646 aa23.37■■□□□ 1.33
KCNC2-208ENST00000549446 ATP1B4Q9UN42 357 aaPredicted RBP23.32■■□□□ 1.32
KCNC2-208ENST00000549446 ZCCHC6Q5VYS8 1495 aaKnown RBP23.25■■□□□ 1.31
KCNC2-208ENST00000549446 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
KCNC2-208ENST00000549446 PABPN1Q86U42 306 aaKnown RBP eCLIP23.19■■□□□ 1.3
KCNC2-208ENST00000549446 CENPBP07199 599 aaPredicted RBP23.16■■□□□ 1.3
KCNC2-208ENST00000549446 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.28
KCNC2-208ENST00000549446 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
KCNC2-208ENST00000549446 LOC105371045A0A1W2PR82 267 aa23.02■■□□□ 1.28
KCNC2-208ENST00000549446 PPARGC1BQ86YN6 1023 aaKnown RBP22.94■■□□□ 1.26
KCNC2-208ENST00000549446 SCRIBQ14160 1630 aa22.91■■□□□ 1.26
KCNC2-208ENST00000549446 MYT1Q01538 1121 aa22.8■■□□□ 1.24
KCNC2-208ENST00000549446 YTHDC1Q96MU7 727 aaKnown RBP22.69■■□□□ 1.22
KCNC2-208ENST00000549446 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.22
KCNC2-208ENST00000549446 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.22
KCNC2-208ENST00000549446 HRCP23327 699 aa22.63■■□□□ 1.21
KCNC2-208ENST00000549446 RB1CC1Q8TDY2 1594 aa22.59■■□□□ 1.21
KCNC2-208ENST00000549446 ITGAEP38570 1179 aa22.57■■□□□ 1.2
KCNC2-208ENST00000549446 NEFLP07196 543 aa22.54■■□□□ 1.2
KCNC2-208ENST00000549446 NACADO15069 1562 aa22.49■■□□□ 1.19
KCNC2-208ENST00000549446 DCAF1Q9Y4B6 1507 aa22.37■■□□□ 1.17
KCNC2-208ENST00000549446 CSRNP3Q8WYN3 585 aa22.36■■□□□ 1.17
KCNC2-208ENST00000549446 MYT1LQ9UL68 1186 aa22.33■■□□□ 1.17
KCNC2-208ENST00000549446 FAM50AQ14320 339 aaKnown RBP22.24■■□□□ 1.15
KCNC2-208ENST00000549446 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
KCNC2-208ENST00000549446 FBLN2P98095 1184 aa22.08■■□□□ 1.13
KCNC2-208ENST00000549446 POLR3GLQ9BT43 218 aa22.01■■□□□ 1.11
KCNC2-208ENST00000549446 TRIM52Q96A61 297 aa22■■□□□ 1.11
KCNC2-208ENST00000549446 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
KCNC2-208ENST00000549446 BAZ1AQ9NRL2 1556 aaPredicted RBP21.96■■□□□ 1.11
KCNC2-208ENST00000549446 BAZ1BQ9UIG0 1483 aaKnown RBP21.93■■□□□ 1.1
KCNC2-208ENST00000549446 DIEXFQ68CQ4 756 aaKnown RBP21.9■■□□□ 1.1
KCNC2-208ENST00000549446 DAXXQ9UER7 740 aaPredicted RBP21.89■■□□□ 1.1
KCNC2-208ENST00000549446 EEA1Q15075 1411 aa21.85■■□□□ 1.09
KCNC2-208ENST00000549446 NEUROD1Q13562 356 aa21.85■■□□□ 1.09
KCNC2-208ENST00000549446 CDK11AQ9UQ88 783 aaPredicted RBP21.82■■□□□ 1.08
KCNC2-208ENST00000549446 MYO15BQ96JP2 1530 aa21.79■■□□□ 1.08
KCNC2-208ENST00000549446 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.07
KCNC2-208ENST00000549446 WRNQ14191 1432 aaPredicted RBP eCLIP21.76■■□□□ 1.07
KCNC2-208ENST00000549446 ARID3CA6NKF2 412 aa21.72■■□□□ 1.07
KCNC2-208ENST00000549446 GOLGA3Q08378 1498 aa21.69■■□□□ 1.06
KCNC2-208ENST00000549446 CLIP1P30622 1438 aa21.66■■□□□ 1.06
KCNC2-208ENST00000549446 CNGB1Q14028 1251 aaPredicted RBP21.66■■□□□ 1.06
KCNC2-208ENST00000549446 ZNF316A6NFI3 1004 aaPredicted RBP21.64■■□□□ 1.05
KCNC2-208ENST00000549446 ZNF777Q9ULD5 760 aaPredicted RBP21.6■■□□□ 1.05
KCNC2-208ENST00000549446 RTL5Q5HYW3 569 aaPredicted RBP21.6■■□□□ 1.05
KCNC2-208ENST00000549446 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
KCNC2-208ENST00000549446 MROH2BQ7Z745 1585 aa21.57■■□□□ 1.04
KCNC2-208ENST00000549446 ZNF326Q5BKZ1 582 aaKnown RBP21.57■■□□□ 1.04
KCNC2-208ENST00000549446 KIF27Q86VH2 1401 aa21.57■■□□□ 1.04
KCNC2-208ENST00000549446 CEP162Q5TB80 1403 aa21.55■■□□□ 1.04
KCNC2-208ENST00000549446 ANP32CO43423 234 aa21.54■■□□□ 1.04
KCNC2-208ENST00000549446 CEP164Q9UPV0 1460 aa21.53■■□□□ 1.04
KCNC2-208ENST00000549446 SMARCA2P51531 1590 aa21.5■■□□□ 1.03
KCNC2-208ENST00000549446 TNIKQ9UKE5 1360 aa21.5■■□□□ 1.03
KCNC2-208ENST00000549446 GTF3C3Q9Y5Q9 886 aa21.5■■□□□ 1.03
KCNC2-208ENST00000549446 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
KCNC2-208ENST00000549446 MTUS2Q5JR59 1369 aa21.46■■□□□ 1.03
KCNC2-208ENST00000549446 CCDC88BA6NC98 1476 aa21.43■■□□□ 1.02
KCNC2-208ENST00000549446 BCANQ96GW7 911 aa21.41■■□□□ 1.02
KCNC2-208ENST00000549446 TONSLQ96HA7 1378 aa21.39■■□□□ 1.02
KCNC2-208ENST00000549446 NPM1P06748 294 aaKnown RBP eCLIP21.38■■□□□ 1.01
KCNC2-208ENST00000549446 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
KCNC2-208ENST00000549446 CLSPNQ9HAW4 1339 aa21.34■■□□□ 1.01
KCNC2-208ENST00000549446 WIZO95785 1651 aa21.3■■□□□ 1
KCNC2-208ENST00000549446 ERCC6Q03468 1493 aa21.28■■□□□ 1
KCNC2-208ENST00000549446 CHIC2Q9UKJ5 165 aa21.27■■□□□ 1
KCNC2-208ENST00000549446 TSPY4P0CV99 314 aa21.25■□□□□ 0.99
KCNC2-208ENST00000549446 TSPY10P0CW01 314 aa21.25■□□□□ 0.99
KCNC2-208ENST00000549446 SOGA1O94964 1423 aa21.24■□□□□ 0.99
KCNC2-208ENST00000549446 CUX2O14529 1486 aa21.22■□□□□ 0.99
KCNC2-208ENST00000549446 SMARCA4P51532 1647 aa21.2■□□□□ 0.98
KCNC2-208ENST00000549446 ABCC8Q09428 1581 aa21.2■□□□□ 0.98
KCNC2-208ENST00000549446 ACIN1Q9UKV3 1341 aaKnown RBP21.19■□□□□ 0.98
KCNC2-208ENST00000549446 CARMIL1Q5VZK9 1371 aa21.18■□□□□ 0.98
KCNC2-208ENST00000549446 PLEKHD1A6NEE1 506 aa21.16■□□□□ 0.98
KCNC2-208ENST00000549446 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.98
KCNC2-208ENST00000549446 FHAD1B1AJZ9 1412 aa21.13■□□□□ 0.97
KCNC2-208ENST00000549446 PDS5BQ9NTI5 1447 aa21.13■□□□□ 0.97
KCNC2-208ENST00000549446 ATAD2BQ9ULI0 1458 aa21.13■□□□□ 0.97
KCNC2-208ENST00000549446 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.08■□□□□ 0.97
KCNC2-208ENST00000549446 CHGAP10645 457 aaKnown RBP21.05■□□□□ 0.96
KCNC2-208ENST00000549446 RRP7BPQ9NSQ0 103 aa21.05■□□□□ 0.96
KCNC2-208ENST00000549446 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms