RNA–Protein interactions for RNA: ENST00000549237.5

USP15-212, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 791 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-212ENST00000549237 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
USP15-212ENST00000549237 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
USP15-212ENST00000549237 SENP3Q9H4L4 574 aaPredicted RBP22.15■■□□□ 1.14
USP15-212ENST00000549237 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
USP15-212ENST00000549237 FOXD1Q16676 465 aa20.59■□□□□ 0.89
USP15-212ENST00000549237 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
USP15-212ENST00000549237 MSH5O43196 834 aa19.41■□□□□ 0.7
USP15-212ENST00000549237 PIAS4Q8N2W9 510 aaPredicted RBP19.28■□□□□ 0.68
USP15-212ENST00000549237 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
USP15-212ENST00000549237 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
USP15-212ENST00000549237 ADRA2BP18089 450 aa19.06■□□□□ 0.64
USP15-212ENST00000549237 SCAF1Q9H7N4 1312 aaKnown RBP17.52■□□□□ 0.4
USP15-212ENST00000549237 MAPK8IP2Q13387 824 aaPredicted RBP17.52■□□□□ 0.4
USP15-212ENST00000549237 DMRT2Q9Y5R5 561 aa17.51■□□□□ 0.39
USP15-212ENST00000549237 PPP4R3CPQ6ZMV5 832 aa17.02■□□□□ 0.32
USP15-212ENST00000549237 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
USP15-212ENST00000549237 HOXD11P31277 338 aaPredicted RBP16.78■□□□□ 0.28
USP15-212ENST00000549237 CACNB1Q02641 598 aaPredicted RBP16.75■□□□□ 0.27
USP15-212ENST00000549237 CNKSR2Q8WXI2 1034 aa16.75■□□□□ 0.27
USP15-212ENST00000549237 RNF216Q9NWF9 866 aaPredicted RBP16.64■□□□□ 0.25
USP15-212ENST00000549237 RNF39Q9H2S5 420 aa16.5■□□□□ 0.23
USP15-212ENST00000549237 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
USP15-212ENST00000549237 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
USP15-212ENST00000549237 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
USP15-212ENST00000549237 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
USP15-212ENST00000549237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.166e-7■■■■□ 22.5
USP15-212ENST00000549237 U3KPZ7 1027 aaPredicted RBP15.65■□□□□ 0.1
USP15-212ENST00000549237 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
USP15-212ENST00000549237 KCNA4P22459 653 aa15.62■□□□□ 0.09
USP15-212ENST00000549237 CAPN15O75808 1086 aa15.5■□□□□ 0.07
USP15-212ENST00000549237 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
USP15-212ENST00000549237 DSG3P32926 999 aa15.4■□□□□ 0.06
USP15-212ENST00000549237 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
USP15-212ENST00000549237 APLP2Q06481 763 aa15.3■□□□□ 0.04
USP15-212ENST00000549237 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.22■□□□□ 0.03
USP15-212ENST00000549237 HNRNPUL2Q1KMD3 747 aaKnown RBP15.22■□□□□ 0.03
USP15-212ENST00000549237 TRHP20396 242 aaPredicted RBP15.2■□□□□ 0.02
USP15-212ENST00000549237 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
USP15-212ENST00000549237 SAMD1Q6SPF0 538 aaPredicted RBP15.12■□□□□ 0.01
USP15-212ENST00000549237 ABCB7O75027 752 aa15.1■□□□□ 0.01
USP15-212ENST00000549237 POTEHQ6S545 545 aa15□□□□□ -0.01
USP15-212ENST00000549237 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
USP15-212ENST00000549237 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
USP15-212ENST00000549237 SLC4A1APQ9BWU0 796 aaKnown RBP14.76□□□□□ -0.05
USP15-212ENST00000549237 POLA2Q14181 598 aa14.73□□□□□ -0.05
USP15-212ENST00000549237 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
USP15-212ENST00000549237 ATF5Q9Y2D1 282 aaPredicted RBP14.5□□□□□ -0.09
USP15-212ENST00000549237 ZBTB12Q9Y330 459 aaPredicted RBP14.49□□□□□ -0.09
USP15-212ENST00000549237 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
USP15-212ENST00000549237 AKT1S1Q96B36 256 aa14.36□□□□□ -0.11
USP15-212ENST00000549237 ZBTB22O15209 634 aa14.32□□□□□ -0.12
USP15-212ENST00000549237 OSCARQ8IYS5 282 aa14.3□□□□□ -0.12
USP15-212ENST00000549237 ATXN8OSP0DMR3 200 aa14.22□□□□□ -0.13
USP15-212ENST00000549237 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
USP15-212ENST00000549237 FBLN2P98095 1184 aa14.07□□□□□ -0.16
USP15-212ENST00000549237 PIP4P2Q8N4L2 257 aa14.07□□□□□ -0.16
USP15-212ENST00000549237 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
USP15-212ENST00000549237 SP7Q8TDD2 431 aaPredicted RBP14□□□□□ -0.17
USP15-212ENST00000549237 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
USP15-212ENST00000549237 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
USP15-212ENST00000549237 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
USP15-212ENST00000549237 FXR2P51116 673 aaKnown RBP eCLIP13.95□□□□□ -0.18
USP15-212ENST00000549237 CCDC180Q9P1Z9 1646 aa13.93□□□□□ -0.18
USP15-212ENST00000549237 HAX1O00165 279 aa13.89□□□□□ -0.19
USP15-212ENST00000549237 MKRN4PQ13434 485 aaPredicted RBP13.84□□□□□ -0.19
USP15-212ENST00000549237 SPDYE1Q8NFV5 336 aaPredicted RBP13.81□□□□□ -0.2
USP15-212ENST00000549237 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
USP15-212ENST00000549237 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
USP15-212ENST00000549237 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
USP15-212ENST00000549237 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
USP15-212ENST00000549237 ABCC9O60706 1549 aa13.69□□□□□ -0.22
USP15-212ENST00000549237 EVX2Q03828 476 aa13.61□□□□□ -0.23
USP15-212ENST00000549237 PABPN1Q86U42 306 aaKnown RBP eCLIP13.58□□□□□ -0.24
USP15-212ENST00000549237 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
USP15-212ENST00000549237 CSRNP3Q8WYN3 585 aa13.52□□□□□ -0.25
USP15-212ENST00000549237 C19orf67A6NJJ6 358 aa13.51□□□□□ -0.25
USP15-212ENST00000549237 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
USP15-212ENST00000549237 GABBR2O75899 941 aa13.35□□□□□ -0.27
USP15-212ENST00000549237 EHMT2Q96KQ7 1210 aa13.33□□□□□ -0.28
USP15-212ENST00000549237 FARP1Q9Y4F1 1045 aaPredicted RBP13.29□□□□□ -0.28
USP15-212ENST00000549237 CD44P16070 742 aaKnown RBP13.28□□□□□ -0.28
USP15-212ENST00000549237 STAG3Q9UJ98 1225 aa13.2□□□□□ -0.3
USP15-212ENST00000549237 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
USP15-212ENST00000549237 CLCN6P51797 869 aa13.14□□□□□ -0.31
USP15-212ENST00000549237 LHX8Q68G74 356 aa13.12□□□□□ -0.31
USP15-212ENST00000549237 CREBZFQ9NS37 354 aa13.11□□□□□ -0.31
USP15-212ENST00000549237 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
USP15-212ENST00000549237 NACADO15069 1562 aa13.07□□□□□ -0.32
USP15-212ENST00000549237 ZNF579Q8NAF0 562 aaKnown RBP13.06□□□□□ -0.32
USP15-212ENST00000549237 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
USP15-212ENST00000549237 DCAF8L2P0C7V8 631 aa13.03□□□□□ -0.32
USP15-212ENST00000549237 POTEIP0CG38 1075 aa13.02□□□□□ -0.33
USP15-212ENST00000549237 DCBLD2Q96PD2 775 aa13.02□□□□□ -0.33
USP15-212ENST00000549237 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
USP15-212ENST00000549237 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
USP15-212ENST00000549237 MYO15BQ96JP2 1530 aa12.98□□□□□ -0.33
USP15-212ENST00000549237 UNC13AQ9UPW8 1703 aa12.96□□□□□ -0.34
USP15-212ENST00000549237 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
USP15-212ENST00000549237 DCAF1Q9Y4B6 1507 aa12.91□□□□□ -0.34
USP15-212ENST00000549237 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms