RNA–Protein interactions for RNA: ENST00000548415.1

AC068643.1-202, humanhuman

TSL 4

Gene AC068643.1, Length 588 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC068643.1-202ENST00000548415 AEBP2Q6ZN18 517 aaPredicted RBP39.18■■■■□ 3.86
AC068643.1-202ENST00000548415 CHIC1Q5VXU3 224 aa37.41■■■■□ 3.58
AC068643.1-202ENST00000548415 SENP3Q9H4L4 574 aaPredicted RBP33.25■■■□□ 2.91
AC068643.1-202ENST00000548415 PHF23Q9BUL5 403 aaPredicted RBP32.92■■■□□ 2.86
AC068643.1-202ENST00000548415 FOXD1Q16676 465 aa31.05■■■□□ 2.56
AC068643.1-202ENST00000548415 PLPPR3Q6T4P5 718 aa29.97■■■□□ 2.39
AC068643.1-202ENST00000548415 PPP6R1Q9UPN7 881 aa29.29■■■□□ 2.28
AC068643.1-202ENST00000548415 ADRA2BP18089 450 aa29.2■■■□□ 2.26
AC068643.1-202ENST00000548415 PIAS4Q8N2W9 510 aaPredicted RBP29.05■■■□□ 2.24
AC068643.1-202ENST00000548415 MSH5O43196 834 aa28.84■■■□□ 2.21
AC068643.1-202ENST00000548415 POTEDQ86YR6 584 aa27.76■■■□□ 2.03
AC068643.1-202ENST00000548415 MAPK8IP2Q13387 824 aaPredicted RBP26.75■■□□□ 1.87
AC068643.1-202ENST00000548415 SCAF1Q9H7N4 1312 aaKnown RBP26.55■■□□□ 1.84
AC068643.1-202ENST00000548415 DMRT2Q9Y5R5 561 aa26.45■■□□□ 1.82
AC068643.1-202ENST00000548415 PPP4R3CPQ6ZMV5 832 aa26.35■■□□□ 1.81
AC068643.1-202ENST00000548415 CNKSR2Q8WXI2 1034 aa25.75■■□□□ 1.71
AC068643.1-202ENST00000548415 HOXD11P31277 338 aaPredicted RBP25.58■■□□□ 1.69
AC068643.1-202ENST00000548415 RNF216Q9NWF9 866 aaPredicted RBP25.45■■□□□ 1.66
AC068643.1-202ENST00000548415 DCAF8L1A6NGE4 600 aa25.36■■□□□ 1.65
AC068643.1-202ENST00000548415 NCBP3Q53F19 620 aaKnown RBP25.33■■□□□ 1.65
AC068643.1-202ENST00000548415 NPM3O75607 178 aaKnown RBP25.09■■□□□ 1.61
AC068643.1-202ENST00000548415 KCNA4P22459 653 aa24.9■■□□□ 1.58
AC068643.1-202ENST00000548415 RNF39Q9H2S5 420 aa24.69■■□□□ 1.54
AC068643.1-202ENST00000548415 CACNB1Q02641 598 aaPredicted RBP24.61■■□□□ 1.53
AC068643.1-202ENST00000548415 DNAJC5BQ9UF47 199 aa24.55■■□□□ 1.52
AC068643.1-202ENST00000548415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.36■■□□□ 1.49
AC068643.1-202ENST00000548415 C1QBPQ07021 282 aaKnown RBP24.29■■□□□ 1.48
AC068643.1-202ENST00000548415 U3KPZ7 1027 aaPredicted RBP23.95■■□□□ 1.42
AC068643.1-202ENST00000548415 SLC4A2P04920 1241 aa23.91■■□□□ 1.42
AC068643.1-202ENST00000548415 SPINK5Q9NQ38 1064 aaPredicted RBP23.54■■□□□ 1.36
AC068643.1-202ENST00000548415 SLC4A1APQ9BWU0 796 aaKnown RBP23.5■■□□□ 1.35
AC068643.1-202ENST00000548415 CAPN15O75808 1086 aa23.42■■□□□ 1.34
AC068643.1-202ENST00000548415 DSG3P32926 999 aa23.23■■□□□ 1.31
AC068643.1-202ENST00000548415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.21■■□□□ 1.31
AC068643.1-202ENST00000548415 HNRNPUL2Q1KMD3 747 aaKnown RBP23.21■■□□□ 1.31
AC068643.1-202ENST00000548415 MYCNP04198 464 aaPredicted RBP23.14■■□□□ 1.29
AC068643.1-202ENST00000548415 SAMD1Q6SPF0 538 aaPredicted RBP23.14■■□□□ 1.29
AC068643.1-202ENST00000548415 TRHP20396 242 aaPredicted RBP23.13■■□□□ 1.29
AC068643.1-202ENST00000548415 APLP2Q06481 763 aa23.13■■□□□ 1.29
AC068643.1-202ENST00000548415 FOXD4L1Q9NU39 408 aa23.07■■□□□ 1.28
AC068643.1-202ENST00000548415 ZNF219Q9P2Y4 722 aaPredicted RBP23.03■■□□□ 1.28
AC068643.1-202ENST00000548415 ABCB7O75027 752 aa22.96■■□□□ 1.27
AC068643.1-202ENST00000548415 ZBTB22O15209 634 aa22.93■■□□□ 1.26
AC068643.1-202ENST00000548415 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.22
AC068643.1-202ENST00000548415 POLA2Q14181 598 aa22.57■■□□□ 1.2
AC068643.1-202ENST00000548415 ATXN8OSP0DMR3 200 aa22.27■■□□□ 1.16
AC068643.1-202ENST00000548415 CSRNP3Q8WYN3 585 aa22.09■■□□□ 1.13
AC068643.1-202ENST00000548415 RBM42Q9BTD8 480 aaKnown RBP22.06■■□□□ 1.12
AC068643.1-202ENST00000548415 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
AC068643.1-202ENST00000548415 EHMT2Q96KQ7 1210 aa21.97■■□□□ 1.11
AC068643.1-202ENST00000548415 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
AC068643.1-202ENST00000548415 POTEHQ6S545 545 aa21.78■■□□□ 1.08
AC068643.1-202ENST00000548415 FBLN2P98095 1184 aa21.65■■□□□ 1.06
AC068643.1-202ENST00000548415 MKRN4PQ13434 485 aaPredicted RBP21.65■■□□□ 1.06
AC068643.1-202ENST00000548415 AKT1S1Q96B36 256 aa21.65■■□□□ 1.06
AC068643.1-202ENST00000548415 CHRDL2Q6WN34 429 aa21.54■■□□□ 1.04
AC068643.1-202ENST00000548415 REM2Q8IYK8 340 aaPredicted RBP21.5■■□□□ 1.03
AC068643.1-202ENST00000548415 SPDYE2BA6NHP3 402 aa21.42■■□□□ 1.02
AC068643.1-202ENST00000548415 SPDYE6P0CI01 402 aa21.42■■□□□ 1.02
AC068643.1-202ENST00000548415 SPDYE2Q495Y8 402 aa21.42■■□□□ 1.02
AC068643.1-202ENST00000548415 PITPNM1O00562 1244 aa21.29■■□□□ 1
AC068643.1-202ENST00000548415 ZNF692Q9BU19 519 aaPredicted RBP21.23■□□□□ 0.99
AC068643.1-202ENST00000548415 SSUH2Q9Y2M2 353 aa21.21■□□□□ 0.99
AC068643.1-202ENST00000548415 PIP4P2Q8N4L2 257 aa21.12■□□□□ 0.97
AC068643.1-202ENST00000548415 FXR2P51116 673 aaKnown RBP eCLIP21.02■□□□□ 0.96
AC068643.1-202ENST00000548415 SPDYE1Q8NFV5 336 aaPredicted RBP20.98■□□□□ 0.95
AC068643.1-202ENST00000548415 CLEC11AQ9Y240 323 aa20.98■□□□□ 0.95
AC068643.1-202ENST00000548415 PABPN1Q86U42 306 aaKnown RBP eCLIP20.96■□□□□ 0.95
AC068643.1-202ENST00000548415 PRKAR2AP13861 404 aaKnown RBP20.72■□□□□ 0.91
AC068643.1-202ENST00000548415 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
AC068643.1-202ENST00000548415 PRR29P0C7W0 189 aa20.63■□□□□ 0.89
AC068643.1-202ENST00000548415 HAX1O00165 279 aa20.62■□□□□ 0.89
AC068643.1-202ENST00000548415 CHADLQ6NUI6 762 aa20.6■□□□□ 0.89
AC068643.1-202ENST00000548415 SP7Q8TDD2 431 aaPredicted RBP20.55■□□□□ 0.88
AC068643.1-202ENST00000548415 EVX2Q03828 476 aa20.49■□□□□ 0.87
AC068643.1-202ENST00000548415 C19orf67A6NJJ6 358 aa20.34■□□□□ 0.85
AC068643.1-202ENST00000548415 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
AC068643.1-202ENST00000548415 PROM2Q8N271 834 aa20.27■□□□□ 0.84
AC068643.1-202ENST00000548415 FARP1Q9Y4F1 1045 aaPredicted RBP20.27■□□□□ 0.84
AC068643.1-202ENST00000548415 CREBZFQ9NS37 354 aa20.25■□□□□ 0.83
AC068643.1-202ENST00000548415 CD44P16070 742 aaKnown RBP20.08■□□□□ 0.81
AC068643.1-202ENST00000548415 FKBP8Q14318 412 aa20■□□□□ 0.79
AC068643.1-202ENST00000548415 GABBR2O75899 941 aa19.97■□□□□ 0.79
AC068643.1-202ENST00000548415 MNX1P50219 401 aaPredicted RBP19.95■□□□□ 0.78
AC068643.1-202ENST00000548415 ZRANB1Q9UGI0 708 aa19.84■□□□□ 0.77
AC068643.1-202ENST00000548415 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
AC068643.1-202ENST00000548415 ZNF579Q8NAF0 562 aaKnown RBP19.77■□□□□ 0.76
AC068643.1-202ENST00000548415 MIER1Q8N108 512 aa19.7■□□□□ 0.74
AC068643.1-202ENST00000548415 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
AC068643.1-202ENST00000548415 PHF12Q96QT6 1004 aa19.64■□□□□ 0.73
AC068643.1-202ENST00000548415 POTEIP0CG38 1075 aa19.61■□□□□ 0.73
AC068643.1-202ENST00000548415 CLCN6P51797 869 aa19.61■□□□□ 0.73
AC068643.1-202ENST00000548415 GALR2O43603 387 aaPredicted RBP19.57■□□□□ 0.72
AC068643.1-202ENST00000548415 PLEKHG5O94827 1062 aa19.57■□□□□ 0.72
AC068643.1-202ENST00000548415 PLCD3Q8N3E9 789 aa19.57■□□□□ 0.72
AC068643.1-202ENST00000548415 TSPYL2Q9H2G4 693 aaPredicted RBP19.53■□□□□ 0.72
AC068643.1-202ENST00000548415 RASEFQ8IZ41 740 aa19.46■□□□□ 0.71
AC068643.1-202ENST00000548415 DCBLD2Q96PD2 775 aa19.45■□□□□ 0.7
AC068643.1-202ENST00000548415 CCDC61Q9Y6R9 512 aa19.43■□□□□ 0.7
AC068643.1-202ENST00000548415 FBXO3Q9UK99 471 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms