RNA–Protein interactions for RNA: ENST00000548315.5

TWF1-207, Transcript of twinfilin actin binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene TWF1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWF1-207ENST00000548315 AEBP2Q6ZN18 517 aaPredicted RBP32.85■■■□□ 2.85
TWF1-207ENST00000548315 CHIC1Q5VXU3 224 aa31.39■■■□□ 2.62
TWF1-207ENST00000548315 SENP3Q9H4L4 574 aaPredicted RBP27.92■■■□□ 2.06
TWF1-207ENST00000548315 PHF23Q9BUL5 403 aaPredicted RBP27.61■■■□□ 2.01
TWF1-207ENST00000548315 FOXD1Q16676 465 aa26.03■■□□□ 1.76
TWF1-207ENST00000548315 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
TWF1-207ENST00000548315 PPP6R1Q9UPN7 881 aa24.55■■□□□ 1.52
TWF1-207ENST00000548315 ADRA2BP18089 450 aa24.47■■□□□ 1.51
TWF1-207ENST00000548315 PIAS4Q8N2W9 510 aaPredicted RBP24.36■■□□□ 1.49
TWF1-207ENST00000548315 MSH5O43196 834 aa24.21■■□□□ 1.47
TWF1-207ENST00000548315 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
TWF1-207ENST00000548315 MAPK8IP2Q13387 824 aaPredicted RBP22.4■■□□□ 1.18
TWF1-207ENST00000548315 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
TWF1-207ENST00000548315 DMRT2Q9Y5R5 561 aa22.2■■□□□ 1.14
TWF1-207ENST00000548315 PPP4R3CPQ6ZMV5 832 aa22.11■■□□□ 1.13
TWF1-207ENST00000548315 CNKSR2Q8WXI2 1034 aa21.62■■□□□ 1.05
TWF1-207ENST00000548315 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
TWF1-207ENST00000548315 RNF216Q9NWF9 866 aaPredicted RBP21.37■■□□□ 1.01
TWF1-207ENST00000548315 NCBP3Q53F19 620 aaKnown RBP21.28■■□□□ 1
TWF1-207ENST00000548315 DCAF8L1A6NGE4 600 aa21.23■□□□□ 0.99
TWF1-207ENST00000548315 NPM3O75607 178 aaKnown RBP21.04■□□□□ 0.96
TWF1-207ENST00000548315 KCNA4P22459 653 aa20.86■□□□□ 0.93
TWF1-207ENST00000548315 RNF39Q9H2S5 420 aa20.72■□□□□ 0.91
TWF1-207ENST00000548315 DNAJC5BQ9UF47 199 aa20.67■□□□□ 0.9
TWF1-207ENST00000548315 CACNB1Q02641 598 aaPredicted RBP20.63■□□□□ 0.89
TWF1-207ENST00000548315 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.43■□□□□ 0.86
TWF1-207ENST00000548315 C1QBPQ07021 282 aaKnown RBP20.41■□□□□ 0.86
TWF1-207ENST00000548315 U3KPZ7 1027 aaPredicted RBP20.07■□□□□ 0.8
TWF1-207ENST00000548315 SLC4A2P04920 1241 aa20.04■□□□□ 0.8
TWF1-207ENST00000548315 SPINK5Q9NQ38 1064 aaPredicted RBP19.72■□□□□ 0.75
TWF1-207ENST00000548315 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
TWF1-207ENST00000548315 CAPN15O75808 1086 aa19.62■□□□□ 0.73
TWF1-207ENST00000548315 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.51■□□□□ 0.71
TWF1-207ENST00000548315 HNRNPUL2Q1KMD3 747 aaKnown RBP19.51■□□□□ 0.71
TWF1-207ENST00000548315 DSG3P32926 999 aa19.49■□□□□ 0.71
TWF1-207ENST00000548315 APLP2Q06481 763 aa19.45■□□□□ 0.7
TWF1-207ENST00000548315 MYCNP04198 464 aaPredicted RBP19.43■□□□□ 0.7
TWF1-207ENST00000548315 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
TWF1-207ENST00000548315 TRHP20396 242 aaPredicted RBP19.37■□□□□ 0.69
TWF1-207ENST00000548315 FOXD4L1Q9NU39 408 aa19.35■□□□□ 0.69
TWF1-207ENST00000548315 ZNF219Q9P2Y4 722 aaPredicted RBP19.33■□□□□ 0.68
TWF1-207ENST00000548315 ZBTB22O15209 634 aa19.21■□□□□ 0.67
TWF1-207ENST00000548315 ABCB7O75027 752 aa19.21■□□□□ 0.67
TWF1-207ENST00000548315 ATF5Q9Y2D1 282 aaPredicted RBP19.01■□□□□ 0.63
TWF1-207ENST00000548315 POLA2Q14181 598 aa18.92■□□□□ 0.62
TWF1-207ENST00000548315 ATXN8OSP0DMR3 200 aa18.73■□□□□ 0.59
TWF1-207ENST00000548315 RBM42Q9BTD8 480 aaKnown RBP18.54■□□□□ 0.56
TWF1-207ENST00000548315 CSRNP3Q8WYN3 585 aa18.52■□□□□ 0.56
TWF1-207ENST00000548315 ZBTB12Q9Y330 459 aaPredicted RBP18.52■□□□□ 0.56
TWF1-207ENST00000548315 EHMT2Q96KQ7 1210 aa18.38■□□□□ 0.53
TWF1-207ENST00000548315 OSCARQ8IYS5 282 aa18.32■□□□□ 0.52
TWF1-207ENST00000548315 POTEHQ6S545 545 aa18.27■□□□□ 0.52
TWF1-207ENST00000548315 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
TWF1-207ENST00000548315 FBLN2P98095 1184 aa18.17■□□□□ 0.5
TWF1-207ENST00000548315 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
TWF1-207ENST00000548315 CHRDL2Q6WN34 429 aa18.07■□□□□ 0.48
TWF1-207ENST00000548315 REM2Q8IYK8 340 aaPredicted RBP18.04■□□□□ 0.48
TWF1-207ENST00000548315 SPDYE2BA6NHP3 402 aa18■□□□□ 0.47
TWF1-207ENST00000548315 SPDYE6P0CI01 402 aa18■□□□□ 0.47
TWF1-207ENST00000548315 SPDYE2Q495Y8 402 aa18■□□□□ 0.47
TWF1-207ENST00000548315 PITPNM1O00562 1244 aa17.84■□□□□ 0.45
TWF1-207ENST00000548315 ZNF692Q9BU19 519 aaPredicted RBP17.81■□□□□ 0.44
TWF1-207ENST00000548315 SSUH2Q9Y2M2 353 aa17.81■□□□□ 0.44
TWF1-207ENST00000548315 PIP4P2Q8N4L2 257 aa17.71■□□□□ 0.43
TWF1-207ENST00000548315 FXR2P51116 673 aaKnown RBP eCLIP17.64■□□□□ 0.41
TWF1-207ENST00000548315 SPDYE1Q8NFV5 336 aaPredicted RBP17.61■□□□□ 0.41
TWF1-207ENST00000548315 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
TWF1-207ENST00000548315 CLEC11AQ9Y240 323 aa17.57■□□□□ 0.4
TWF1-207ENST00000548315 SPDYE4A6NLX3 237 aa17.37■□□□□ 0.37
TWF1-207ENST00000548315 PRKAR2AP13861 404 aaKnown RBP17.37■□□□□ 0.37
TWF1-207ENST00000548315 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
TWF1-207ENST00000548315 HAX1O00165 279 aa17.29■□□□□ 0.36
TWF1-207ENST00000548315 CHADLQ6NUI6 762 aa17.24■□□□□ 0.35
TWF1-207ENST00000548315 SP7Q8TDD2 431 aaPredicted RBP17.23■□□□□ 0.35
TWF1-207ENST00000548315 EVX2Q03828 476 aa17.16■□□□□ 0.34
TWF1-207ENST00000548315 STAG3Q9UJ98 1225 aa17.1■□□□□ 0.33
TWF1-207ENST00000548315 C19orf67A6NJJ6 358 aa17.07■□□□□ 0.32
TWF1-207ENST00000548315 PROM2Q8N271 834 aa17.03■□□□□ 0.32
TWF1-207ENST00000548315 FARP1Q9Y4F1 1045 aaPredicted RBP17■□□□□ 0.31
TWF1-207ENST00000548315 CREBZFQ9NS37 354 aa16.98■□□□□ 0.31
TWF1-207ENST00000548315 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
TWF1-207ENST00000548315 FKBP8Q14318 412 aa16.75■□□□□ 0.27
TWF1-207ENST00000548315 GABBR2O75899 941 aa16.74■□□□□ 0.27
TWF1-207ENST00000548315 MNX1P50219 401 aaPredicted RBP16.74■□□□□ 0.27
TWF1-207ENST00000548315 ZRANB1Q9UGI0 708 aa16.62■□□□□ 0.25
TWF1-207ENST00000548315 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
TWF1-207ENST00000548315 ZNF579Q8NAF0 562 aaKnown RBP16.59■□□□□ 0.25
TWF1-207ENST00000548315 CLCN6P51797 869 aa16.52■□□□□ 0.24
TWF1-207ENST00000548315 MIER1Q8N108 512 aa16.52■□□□□ 0.24
TWF1-207ENST00000548315 PAK3O75914 559 aaPredicted RBP16.5■□□□□ 0.23
TWF1-207ENST00000548315 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
TWF1-207ENST00000548315 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
TWF1-207ENST00000548315 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
TWF1-207ENST00000548315 PLCD3Q8N3E9 789 aa16.41■□□□□ 0.22
TWF1-207ENST00000548315 GALR2O43603 387 aaPredicted RBP16.39■□□□□ 0.21
TWF1-207ENST00000548315 TSPYL2Q9H2G4 693 aaPredicted RBP16.36■□□□□ 0.21
TWF1-207ENST00000548315 RASEFQ8IZ41 740 aa16.31■□□□□ 0.2
TWF1-207ENST00000548315 DCBLD2Q96PD2 775 aa16.31■□□□□ 0.2
TWF1-207ENST00000548315 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
TWF1-207ENST00000548315 CCDC61Q9Y6R9 512 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms