RNA–Protein interactions for RNA: ENST00000548071.1

LUM-203, Transcript of lumican, humanhuman

TSL 3

Gene LUM, Length 992 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LUM-203ENST00000548071 AEBP2Q6ZN18 517 aaPredicted RBP28.71■■■□□ 2.19
LUM-203ENST00000548071 CHIC1Q5VXU3 224 aa27.61■■■□□ 2.01
LUM-203ENST00000548071 SENP3Q9H4L4 574 aaPredicted RBP24.39■■□□□ 1.49
LUM-203ENST00000548071 PHF23Q9BUL5 403 aaPredicted RBP24.25■■□□□ 1.47
LUM-203ENST00000548071 FOXD1Q16676 465 aa22.7■■□□□ 1.22
LUM-203ENST00000548071 PLPPR3Q6T4P5 718 aa22.22■■□□□ 1.15
LUM-203ENST00000548071 PPP6R1Q9UPN7 881 aa21.53■■□□□ 1.04
LUM-203ENST00000548071 ADRA2BP18089 450 aa21.47■■□□□ 1.03
LUM-203ENST00000548071 PIAS4Q8N2W9 510 aaPredicted RBP21.29■■□□□ 1
LUM-203ENST00000548071 MSH5O43196 834 aa21.08■□□□□ 0.97
LUM-203ENST00000548071 POTEDQ86YR6 584 aa19.95■□□□□ 0.78
LUM-203ENST00000548071 MAPK8IP2Q13387 824 aaPredicted RBP19.61■□□□□ 0.73
LUM-203ENST00000548071 SCAF1Q9H7N4 1312 aaKnown RBP19.6■□□□□ 0.73
LUM-203ENST00000548071 PPP4R3CPQ6ZMV5 832 aa19.52■□□□□ 0.72
LUM-203ENST00000548071 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
LUM-203ENST00000548071 CNKSR2Q8WXI2 1034 aa19.07■□□□□ 0.64
LUM-203ENST00000548071 NCBP3Q53F19 620 aaKnown RBP18.87■□□□□ 0.61
LUM-203ENST00000548071 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
LUM-203ENST00000548071 RNF216Q9NWF9 866 aaPredicted RBP18.81■□□□□ 0.6
LUM-203ENST00000548071 NPM3O75607 178 aaKnown RBP18.63■□□□□ 0.57
LUM-203ENST00000548071 KCNA4P22459 653 aa18.62■□□□□ 0.57
LUM-203ENST00000548071 DCAF8L1A6NGE4 600 aa18.55■□□□□ 0.56
LUM-203ENST00000548071 DNAJC5BQ9UF47 199 aa18.18■□□□□ 0.5
LUM-203ENST00000548071 RNF39Q9H2S5 420 aa18.05■□□□□ 0.48
LUM-203ENST00000548071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.93■□□□□ 0.46
LUM-203ENST00000548071 CACNB1Q02641 598 aaPredicted RBP17.84■□□□□ 0.45
LUM-203ENST00000548071 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
LUM-203ENST00000548071 SLC4A2P04920 1241 aa17.71■□□□□ 0.43
LUM-203ENST00000548071 U3KPZ7 1027 aaPredicted RBP17.64■□□□□ 0.41
LUM-203ENST00000548071 SLC4A1APQ9BWU0 796 aaKnown RBP17.63■□□□□ 0.41
LUM-203ENST00000548071 SPINK5Q9NQ38 1064 aaPredicted RBP17.26■□□□□ 0.35
LUM-203ENST00000548071 FOXD4L1Q9NU39 408 aa17.25■□□□□ 0.35
LUM-203ENST00000548071 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.22■□□□□ 0.35
LUM-203ENST00000548071 HNRNPUL2Q1KMD3 747 aaKnown RBP17.22■□□□□ 0.35
LUM-203ENST00000548071 MYCNP04198 464 aaPredicted RBP17.21■□□□□ 0.35
LUM-203ENST00000548071 CAPN15O75808 1086 aa17.18■□□□□ 0.34
LUM-203ENST00000548071 SAMD1Q6SPF0 538 aaPredicted RBP17.16■□□□□ 0.34
LUM-203ENST00000548071 ZBTB22O15209 634 aa17.15■□□□□ 0.34
LUM-203ENST00000548071 APLP2Q06481 763 aa17.14■□□□□ 0.33
LUM-203ENST00000548071 DSG3P32926 999 aa17.02■□□□□ 0.32
LUM-203ENST00000548071 TRHP20396 242 aaPredicted RBP17■□□□□ 0.31
LUM-203ENST00000548071 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
LUM-203ENST00000548071 ABCB7O75027 752 aa16.84■□□□□ 0.29
LUM-203ENST00000548071 ATF5Q9Y2D1 282 aaPredicted RBP16.81■□□□□ 0.28
LUM-203ENST00000548071 ATXN8OSP0DMR3 200 aa16.67■□□□□ 0.26
LUM-203ENST00000548071 CSRNP3Q8WYN3 585 aa16.67■□□□□ 0.26
LUM-203ENST00000548071 EHMT2Q96KQ7 1210 aa16.65■□□□□ 0.26
LUM-203ENST00000548071 POLA2Q14181 598 aa16.63■□□□□ 0.25
LUM-203ENST00000548071 ZBTB12Q9Y330 459 aaPredicted RBP16.32■□□□□ 0.2
LUM-203ENST00000548071 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
LUM-203ENST00000548071 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
LUM-203ENST00000548071 FBLN2P98095 1184 aa16.08■□□□□ 0.16
LUM-203ENST00000548071 MKRN4PQ13434 485 aaPredicted RBP16.06■□□□□ 0.16
LUM-203ENST00000548071 AKT1S1Q96B36 256 aa15.93■□□□□ 0.14
LUM-203ENST00000548071 SPDYE2BA6NHP3 402 aa15.87■□□□□ 0.13
LUM-203ENST00000548071 SPDYE6P0CI01 402 aa15.87■□□□□ 0.13
LUM-203ENST00000548071 SPDYE2Q495Y8 402 aa15.87■□□□□ 0.13
LUM-203ENST00000548071 REM2Q8IYK8 340 aaPredicted RBP15.77■□□□□ 0.12
LUM-203ENST00000548071 ZNF692Q9BU19 519 aaPredicted RBP15.73■□□□□ 0.11
LUM-203ENST00000548071 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
LUM-203ENST00000548071 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
LUM-203ENST00000548071 POTEHQ6S545 545 aa15.7■□□□□ 0.1
LUM-203ENST00000548071 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
LUM-203ENST00000548071 PABPN1Q86U42 306 aaKnown RBP eCLIP15.51■□□□□ 0.07
LUM-203ENST00000548071 SPDYE1Q8NFV5 336 aaPredicted RBP15.49■□□□□ 0.07
LUM-203ENST00000548071 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
LUM-203ENST00000548071 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
LUM-203ENST00000548071 CLEC11AQ9Y240 323 aa15.42■□□□□ 0.06
LUM-203ENST00000548071 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
LUM-203ENST00000548071 PRR29P0C7W0 189 aa15.23■□□□□ 0.03
LUM-203ENST00000548071 PRKAR2AP13861 404 aaKnown RBP15.2■□□□□ 0.02
LUM-203ENST00000548071 PROM2Q8N271 834 aa15.2■□□□□ 0.02
LUM-203ENST00000548071 STAG3Q9UJ98 1225 aa15.16■□□□□ 0.02
LUM-203ENST00000548071 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
LUM-203ENST00000548071 FKBP8Q14318 412 aa15.09■□□□□ 0.01
LUM-203ENST00000548071 HAX1O00165 279 aa15.01□□□□□ -0.01
LUM-203ENST00000548071 CREBZFQ9NS37 354 aa14.98□□□□□ -0.01
LUM-203ENST00000548071 FARP1Q9Y4F1 1045 aaPredicted RBP14.93□□□□□ -0.02
LUM-203ENST00000548071 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
LUM-203ENST00000548071 EVX2Q03828 476 aa14.9□□□□□ -0.02
LUM-203ENST00000548071 SP7Q8TDD2 431 aaPredicted RBP14.9□□□□□ -0.02
LUM-203ENST00000548071 MNX1P50219 401 aaPredicted RBP14.78□□□□□ -0.04
LUM-203ENST00000548071 CD44P16070 742 aaKnown RBP14.75□□□□□ -0.05
LUM-203ENST00000548071 NPM1P06748 294 aaKnown RBP eCLIP14.68□□□□□ -0.06
LUM-203ENST00000548071 MIER1Q8N108 512 aa14.68□□□□□ -0.06
LUM-203ENST00000548071 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
LUM-203ENST00000548071 PLEKHG5O94827 1062 aa14.62□□□□□ -0.07
LUM-203ENST00000548071 PLCD3Q8N3E9 789 aa14.62□□□□□ -0.07
LUM-203ENST00000548071 ZRANB1Q9UGI0 708 aa14.59□□□□□ -0.07
LUM-203ENST00000548071 GABBR2O75899 941 aa14.57□□□□□ -0.08
LUM-203ENST00000548071 ZNF579Q8NAF0 562 aaKnown RBP14.56□□□□□ -0.08
LUM-203ENST00000548071 PAK3O75914 559 aaPredicted RBP14.53□□□□□ -0.08
LUM-203ENST00000548071 ZBTB47Q9UFB7 747 aaPredicted RBP14.49□□□□□ -0.09
LUM-203ENST00000548071 VASPP50552 380 aaPredicted RBP14.48□□□□□ -0.09
LUM-203ENST00000548071 CLCN6P51797 869 aa14.45□□□□□ -0.1
LUM-203ENST00000548071 RASEFQ8IZ41 740 aa14.44□□□□□ -0.1
LUM-203ENST00000548071 PHF12Q96QT6 1004 aa14.44□□□□□ -0.1
LUM-203ENST00000548071 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
LUM-203ENST00000548071 NUBP1P53384 320 aa14.4□□□□□ -0.1
LUM-203ENST00000548071 CCDC61Q9Y6R9 512 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms