RNA–Protein interactions for RNA: ENST00000546859.5

CCT2-205, Transcript of chaperonin containing TCP1 subunit 2, humanhuman

TSL 2

Gene CCT2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT2-205ENST00000546859 AEBP2Q6ZN18 517 aaPredicted RBP32.15■■■□□ 2.74
CCT2-205ENST00000546859 CHIC1Q5VXU3 224 aa30.84■■■□□ 2.53
CCT2-205ENST00000546859 SENP3Q9H4L4 574 aaPredicted RBP27.33■■□□□ 1.97
CCT2-205ENST00000546859 PHF23Q9BUL5 403 aaPredicted RBP27.08■■□□□ 1.93
CCT2-205ENST00000546859 FOXD1Q16676 465 aa25.45■■□□□ 1.66
CCT2-205ENST00000546859 PLPPR3Q6T4P5 718 aa24.78■■□□□ 1.56
CCT2-205ENST00000546859 PPP6R1Q9UPN7 881 aa24.08■■□□□ 1.45
CCT2-205ENST00000546859 ADRA2BP18089 450 aa23.99■■□□□ 1.43
CCT2-205ENST00000546859 PIAS4Q8N2W9 510 aaPredicted RBP23.83■■□□□ 1.41
CCT2-205ENST00000546859 MSH5O43196 834 aa23.66■■□□□ 1.38
CCT2-205ENST00000546859 POTEDQ86YR6 584 aa22.53■■□□□ 1.2
CCT2-205ENST00000546859 MAPK8IP2Q13387 824 aaPredicted RBP21.94■■□□□ 1.1
CCT2-205ENST00000546859 SCAF1Q9H7N4 1312 aaKnown RBP21.92■■□□□ 1.1
CCT2-205ENST00000546859 PPP4R3CPQ6ZMV5 832 aa21.76■■□□□ 1.07
CCT2-205ENST00000546859 DMRT2Q9Y5R5 561 aa21.75■■□□□ 1.07
CCT2-205ENST00000546859 CNKSR2Q8WXI2 1034 aa21.28■■□□□ 1
CCT2-205ENST00000546859 HOXD11P31277 338 aaPredicted RBP21.09■□□□□ 0.97
CCT2-205ENST00000546859 RNF216Q9NWF9 866 aaPredicted RBP21.01■□□□□ 0.95
CCT2-205ENST00000546859 NCBP3Q53F19 620 aaKnown RBP21■□□□□ 0.95
CCT2-205ENST00000546859 DCAF8L1A6NGE4 600 aa20.76■□□□□ 0.91
CCT2-205ENST00000546859 NPM3O75607 178 aaKnown RBP20.75■□□□□ 0.91
CCT2-205ENST00000546859 NISCHQ9Y2I1 1504 aa20.65■□□□□ 0.9
CCT2-205ENST00000546859 KCNA4P22459 653 aa20.65■□□□□ 0.9
CCT2-205ENST00000546859 DNAJC5BQ9UF47 199 aa20.31■□□□□ 0.84
CCT2-205ENST00000546859 RNF39Q9H2S5 420 aa20.25■□□□□ 0.83
CCT2-205ENST00000546859 CACNB1Q02641 598 aaPredicted RBP20.07■□□□□ 0.8
CCT2-205ENST00000546859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
CCT2-205ENST00000546859 C1QBPQ07021 282 aaKnown RBP19.96■□□□□ 0.79
CCT2-205ENST00000546859 SLC4A2P04920 1241 aa19.74■□□□□ 0.75
CCT2-205ENST00000546859 U3KPZ7 1027 aaPredicted RBP19.7■□□□□ 0.74
CCT2-205ENST00000546859 SLC4A1APQ9BWU0 796 aaKnown RBP19.53■□□□□ 0.72
CCT2-205ENST00000546859 SPINK5Q9NQ38 1064 aaPredicted RBP19.31■□□□□ 0.68
CCT2-205ENST00000546859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.23■□□□□ 0.67
CCT2-205ENST00000546859 HNRNPUL2Q1KMD3 747 aaKnown RBP19.23■□□□□ 0.67
CCT2-205ENST00000546859 CAPN15O75808 1086 aa19.21■□□□□ 0.67
CCT2-205ENST00000546859 MYCNP04198 464 aaPredicted RBP19.16■□□□□ 0.66
CCT2-205ENST00000546859 SAMD1Q6SPF0 538 aaPredicted RBP19.14■□□□□ 0.65
CCT2-205ENST00000546859 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
CCT2-205ENST00000546859 APLP2Q06481 763 aa19.13■□□□□ 0.65
CCT2-205ENST00000546859 DSG3P32926 999 aa19.08■□□□□ 0.64
CCT2-205ENST00000546859 ZBTB22O15209 634 aa19.01■□□□□ 0.63
CCT2-205ENST00000546859 TRHP20396 242 aaPredicted RBP18.99■□□□□ 0.63
CCT2-205ENST00000546859 ZNF219Q9P2Y4 722 aaPredicted RBP18.98■□□□□ 0.63
CCT2-205ENST00000546859 ABCB7O75027 752 aa18.8■□□□□ 0.6
CCT2-205ENST00000546859 ATF5Q9Y2D1 282 aaPredicted RBP18.72■□□□□ 0.59
CCT2-205ENST00000546859 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
CCT2-205ENST00000546859 POLA2Q14181 598 aa18.58■□□□□ 0.56
CCT2-205ENST00000546859 ABCC9O60706 1549 aa18.55■□□□□ 0.56
CCT2-205ENST00000546859 ATXN8OSP0DMR3 200 aa18.54■□□□□ 0.56
CCT2-205ENST00000546859 CSRNP3Q8WYN3 585 aa18.44■□□□□ 0.54
CCT2-205ENST00000546859 EHMT2Q96KQ7 1210 aa18.33■□□□□ 0.52
CCT2-205ENST00000546859 ZBTB12Q9Y330 459 aaPredicted RBP18.22■□□□□ 0.51
CCT2-205ENST00000546859 RBM42Q9BTD8 480 aaKnown RBP18.15■□□□□ 0.5
CCT2-205ENST00000546859 OSCARQ8IYS5 282 aa17.98■□□□□ 0.47
CCT2-205ENST00000546859 FBLN2P98095 1184 aa17.91■□□□□ 0.46
CCT2-205ENST00000546859 MKRN4PQ13434 485 aaPredicted RBP17.88■□□□□ 0.45
CCT2-205ENST00000546859 AKT1S1Q96B36 256 aa17.83■□□□□ 0.44
CCT2-205ENST00000546859 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
CCT2-205ENST00000546859 POTEHQ6S545 545 aa17.72■□□□□ 0.43
CCT2-205ENST00000546859 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.43
CCT2-205ENST00000546859 SPDYE6P0CI01 402 aa17.71■□□□□ 0.43
CCT2-205ENST00000546859 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
CCT2-205ENST00000546859 REM2Q8IYK8 340 aaPredicted RBP17.67■□□□□ 0.42
CCT2-205ENST00000546859 CHRDL2Q6WN34 429 aa17.63■□□□□ 0.41
CCT2-205ENST00000546859 NACADO15069 1562 aa17.6■□□□□ 0.41
CCT2-205ENST00000546859 ZNF692Q9BU19 519 aaPredicted RBP17.53■□□□□ 0.4
CCT2-205ENST00000546859 SSUH2Q9Y2M2 353 aa17.53■□□□□ 0.4
CCT2-205ENST00000546859 UNC13AQ9UPW8 1703 aa17.47■□□□□ 0.39
CCT2-205ENST00000546859 PITPNM1O00562 1244 aa17.47■□□□□ 0.39
CCT2-205ENST00000546859 MYO15BQ96JP2 1530 aa17.33■□□□□ 0.37
CCT2-205ENST00000546859 ZCCHC6Q5VYS8 1495 aaKnown RBP17.33■□□□□ 0.37
CCT2-205ENST00000546859 PIP4P2Q8N4L2 257 aa17.3■□□□□ 0.36
CCT2-205ENST00000546859 SPDYE1Q8NFV5 336 aaPredicted RBP17.3■□□□□ 0.36
CCT2-205ENST00000546859 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
CCT2-205ENST00000546859 FXR2P51116 673 aaKnown RBP eCLIP17.27■□□□□ 0.364e-8■■□□□ 12.3
CCT2-205ENST00000546859 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
CCT2-205ENST00000546859 CLEC11AQ9Y240 323 aa17.23■□□□□ 0.35
CCT2-205ENST00000546859 BICRAQ9NZM4 1560 aa17.19■□□□□ 0.34
CCT2-205ENST00000546859 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
CCT2-205ENST00000546859 DCAF8L2P0C7V8 631 aa17.14■□□□□ 0.33
CCT2-205ENST00000546859 SHROOM4Q9ULL8 1493 aa17.07■□□□□ 0.32
CCT2-205ENST00000546859 PRR29P0C7W0 189 aa17.01■□□□□ 0.31
CCT2-205ENST00000546859 PRKAR2AP13861 404 aaKnown RBP17.01■□□□□ 0.31
CCT2-205ENST00000546859 CHADLQ6NUI6 762 aa16.89■□□□□ 0.29
CCT2-205ENST00000546859 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CCT2-205ENST00000546859 STAG3Q9UJ98 1225 aa16.88■□□□□ 0.29
CCT2-205ENST00000546859 CC2D2AQ9P2K1 1620 aa16.87■□□□□ 0.29
CCT2-205ENST00000546859 HAX1O00165 279 aa16.86■□□□□ 0.29
CCT2-205ENST00000546859 SCRIBQ14160 1630 aa16.84■□□□□ 0.29
CCT2-205ENST00000546859 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
CCT2-205ENST00000546859 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
CCT2-205ENST00000546859 CECR2Q9BXF3 1484 aa16.77■□□□□ 0.28
CCT2-205ENST00000546859 EVX2Q03828 476 aa16.73■□□□□ 0.27
CCT2-205ENST00000546859 C19orf67A6NJJ6 358 aa16.7■□□□□ 0.26
CCT2-205ENST00000546859 CREBZFQ9NS37 354 aa16.7■□□□□ 0.26
CCT2-205ENST00000546859 FARP1Q9Y4F1 1045 aaPredicted RBP16.69■□□□□ 0.26
CCT2-205ENST00000546859 FKBP8Q14318 412 aa16.66■□□□□ 0.26
CCT2-205ENST00000546859 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
CCT2-205ENST00000546859 CD44P16070 742 aaKnown RBP16.49■□□□□ 0.23
CCT2-205ENST00000546859 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms