RNA–Protein interactions for RNA: ENST00000546748.1

ERBB3-204, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-204ENST00000546748 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
ERBB3-204ENST00000546748 CCDC180Q9P1Z9 1646 aa14.77□□□□□ -0.04
ERBB3-204ENST00000546748 ZCCHC6Q5VYS8 1495 aaKnown RBP14.37□□□□□ -0.11
ERBB3-204ENST00000546748 DCAF1Q9Y4B6 1507 aa14.13□□□□□ -0.15
ERBB3-204ENST00000546748 SHROOM4Q9ULL8 1493 aa14.04□□□□□ -0.16
ERBB3-204ENST00000546748 DCAF8L2P0C7V8 631 aa14.03□□□□□ -0.16
ERBB3-204ENST00000546748 MYO15BQ96JP2 1530 aa13.9□□□□□ -0.19
ERBB3-204ENST00000546748 ABCC9O60706 1549 aa13.79□□□□□ -0.2
ERBB3-204ENST00000546748 NACADO15069 1562 aa13.75□□□□□ -0.21
ERBB3-204ENST00000546748 SUPT5HO00267 1087 aaKnown RBP13.63□□□□□ -0.23
ERBB3-204ENST00000546748 SCRIBQ14160 1630 aa13.61□□□□□ -0.23
ERBB3-204ENST00000546748 RB1CC1Q8TDY2 1594 aa13.58□□□□□ -0.24
ERBB3-204ENST00000546748 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
ERBB3-204ENST00000546748 UNC13AQ9UPW8 1703 aa13.19□□□□□ -0.3
ERBB3-204ENST00000546748 CECR2Q9BXF3 1484 aa13.19□□□□□ -0.3
ERBB3-204ENST00000546748 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
ERBB3-204ENST00000546748 MROH2BQ7Z745 1585 aa13.15□□□□□ -0.3
ERBB3-204ENST00000546748 CHIC1Q5VXU3 224 aa13.15□□□□□ -0.3
ERBB3-204ENST00000546748 BICRAQ9NZM4 1560 aa13.09□□□□□ -0.31
ERBB3-204ENST00000546748 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
ERBB3-204ENST00000546748 PABPN1Q86U42 306 aaKnown RBP eCLIP13.04□□□□□ -0.32
ERBB3-204ENST00000546748 WIZO95785 1651 aa13.03□□□□□ -0.32
ERBB3-204ENST00000546748 TOP2AP11388 1531 aaKnown RBP12.97□□□□□ -0.33
ERBB3-204ENST00000546748 PEG3Q9GZU2 1588 aa12.9□□□□□ -0.35
ERBB3-204ENST00000546748 SMARCA2P51531 1590 aa12.84□□□□□ -0.35
ERBB3-204ENST00000546748 TRIM41Q8WV44 630 aa12.83□□□□□ -0.36
ERBB3-204ENST00000546748 CCDC88BA6NC98 1476 aa12.82□□□□□ -0.36
ERBB3-204ENST00000546748 ATAD2BQ9ULI0 1458 aa12.81□□□□□ -0.36
ERBB3-204ENST00000546748 BAZ1BQ9UIG0 1483 aaKnown RBP12.78□□□□□ -0.36
ERBB3-204ENST00000546748 EIF4G1Q04637 1599 aaKnown RBP12.77□□□□□ -0.36
ERBB3-204ENST00000546748 HMGXB3Q12766 1538 aa12.68□□□□□ -0.38
ERBB3-204ENST00000546748 NCAPD3P42695 1498 aa12.67□□□□□ -0.38
ERBB3-204ENST00000546748 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
ERBB3-204ENST00000546748 ABCC8Q09428 1581 aa12.58□□□□□ -0.4
ERBB3-204ENST00000546748 FAM9AQ8IZU1 332 aaPredicted RBP12.56□□□□□ -0.4
ERBB3-204ENST00000546748 WRNQ14191 1432 aaPredicted RBP eCLIP12.54□□□□□ -0.4
ERBB3-204ENST00000546748 EEA1Q15075 1411 aa12.53□□□□□ -0.4
ERBB3-204ENST00000546748 CC2D2AQ9P2K1 1620 aa12.47□□□□□ -0.41
ERBB3-204ENST00000546748 CFTRP13569 1480 aa12.44□□□□□ -0.42
ERBB3-204ENST00000546748 SYNJ1O43426 1573 aa12.43□□□□□ -0.42
ERBB3-204ENST00000546748 SOGA1O94964 1423 aa12.41□□□□□ -0.42
ERBB3-204ENST00000546748 CSRNP3Q8WYN3 585 aa12.39□□□□□ -0.43
ERBB3-204ENST00000546748 TOP2BQ02880 1626 aa12.39□□□□□ -0.43
ERBB3-204ENST00000546748 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
ERBB3-204ENST00000546748 PRDM2Q13029 1718 aa12.36□□□□□ -0.43
ERBB3-204ENST00000546748 BIVM-ERCC5R4GMW8 1640 aa12.36□□□□□ -0.43
ERBB3-204ENST00000546748 EHMT2Q96KQ7 1210 aa12.35□□□□□ -0.43
ERBB3-204ENST00000546748 GOLGA3Q08378 1498 aa12.33□□□□□ -0.44
ERBB3-204ENST00000546748 TNIKQ9UKE5 1360 aa12.32□□□□□ -0.44
ERBB3-204ENST00000546748 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
ERBB3-204ENST00000546748 CEP164Q9UPV0 1460 aa12.31□□□□□ -0.44
ERBB3-204ENST00000546748 CUX1P39880 1505 aa12.3□□□□□ -0.44
ERBB3-204ENST00000546748 PCGF6Q9BYE7 350 aa12.29□□□□□ -0.44
ERBB3-204ENST00000546748 KIF21BO75037 1637 aa12.29□□□□□ -0.44
ERBB3-204ENST00000546748 TRIM26Q12899 539 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-204ENST00000546748 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
ERBB3-204ENST00000546748 CEP162Q5TB80 1403 aa12.26□□□□□ -0.45
ERBB3-204ENST00000546748 FANCD2Q9BXW9 1451 aa12.23□□□□□ -0.45
ERBB3-204ENST00000546748 KIF27Q86VH2 1401 aa12.23□□□□□ -0.45
ERBB3-204ENST00000546748 LAMC3Q9Y6N6 1575 aa12.21□□□□□ -0.46
ERBB3-204ENST00000546748 ERICH3Q5RHP9 1530 aa12.18□□□□□ -0.46
ERBB3-204ENST00000546748 PRXQ9BXM0 1461 aa12.16□□□□□ -0.46
ERBB3-204ENST00000546748 DNMBPQ6XZF7 1577 aa12.16□□□□□ -0.46
ERBB3-204ENST00000546748 FGD5Q6ZNL6 1462 aa12.15□□□□□ -0.46
ERBB3-204ENST00000546748 RAPGEF2Q9Y4G8 1499 aa12.15□□□□□ -0.46
ERBB3-204ENST00000546748 PDS5BQ9NTI5 1447 aa12.15□□□□□ -0.46
ERBB3-204ENST00000546748 CLIP1P30622 1438 aa12.13□□□□□ -0.47
ERBB3-204ENST00000546748 NESP48681 1621 aa12.13□□□□□ -0.47
ERBB3-204ENST00000546748 HRCP23327 699 aa12.13□□□□□ -0.47
ERBB3-204ENST00000546748 CUX2O14529 1486 aa12.13□□□□□ -0.47
ERBB3-204ENST00000546748 TOPBP1Q92547 1522 aa12.11□□□□□ -0.47
ERBB3-204ENST00000546748 ABCA10Q8WWZ4 1543 aa12.06□□□□□ -0.48
ERBB3-204ENST00000546748 IGF1RP08069 1367 aa12.06□□□□□ -0.48
ERBB3-204ENST00000546748 POLA1P09884 1462 aaPredicted RBP12.06□□□□□ -0.48
ERBB3-204ENST00000546748 VPS8Q8N3P4 1428 aa12.05□□□□□ -0.48
ERBB3-204ENST00000546748 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
ERBB3-204ENST00000546748 CARMIL1Q5VZK9 1371 aa12.04□□□□□ -0.48
ERBB3-204ENST00000546748 DNAJC5BQ9UF47 199 aa12.02□□□□□ -0.49
ERBB3-204ENST00000546748 APLP2Q06481 763 aa12.01□□□□□ -0.49
ERBB3-204ENST00000546748 PPARGC1BQ86YN6 1023 aaKnown RBP12.01□□□□□ -0.49
ERBB3-204ENST00000546748 RAD54L2Q9Y4B4 1467 aa12.01□□□□□ -0.49
ERBB3-204ENST00000546748 KIF21AQ7Z4S6 1674 aa11.98□□□□□ -0.49
ERBB3-204ENST00000546748 CUL7Q14999 1698 aa11.97□□□□□ -0.49
ERBB3-204ENST00000546748 MRC2Q9UBG0 1479 aa11.96□□□□□ -0.49
ERBB3-204ENST00000546748 ZEB1P37275 1124 aaPredicted RBP11.96□□□□□ -0.49
ERBB3-204ENST00000546748 RANGAP1P46060 587 aaPredicted RBP11.96□□□□□ -0.49
ERBB3-204ENST00000546748 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
ERBB3-204ENST00000546748 ARAP1Q96P48 1450 aa11.95□□□□□ -0.5
ERBB3-204ENST00000546748 GAPVD1Q14C86 1478 aa11.92□□□□□ -0.5
ERBB3-204ENST00000546748 ABCA5Q8WWZ7 1642 aa11.92□□□□□ -0.5
ERBB3-204ENST00000546748 ARHGAP35Q9NRY4 1499 aa11.9□□□□□ -0.5
ERBB3-204ENST00000546748 TTBK1Q5TCY1 1321 aaPredicted RBP11.89□□□□□ -0.51
ERBB3-204ENST00000546748 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
ERBB3-204ENST00000546748 TARBP1Q13395 1621 aaKnown RBP11.88□□□□□ -0.51
ERBB3-204ENST00000546748 WDR62O43379 1518 aa11.86□□□□□ -0.51
ERBB3-204ENST00000546748 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
ERBB3-204ENST00000546748 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
ERBB3-204ENST00000546748 EFCAB5A4FU69 1503 aa11.86□□□□□ -0.51
ERBB3-204ENST00000546748 FHAD1B1AJZ9 1412 aa11.85□□□□□ -0.51
ERBB3-204ENST00000546748 CTTNBP2Q8WZ74 1663 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms