RNA–Protein interactions for RNA: ENST00000546696.1

AC078880.1-201, humanhuman

TSL 4 BASIC

Gene AC078880.1, Length 553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC078880.1-201ENST00000546696 AEBP2Q6ZN18 517 aaPredicted RBP37.46■■■■□ 3.59
AC078880.1-201ENST00000546696 CHIC1Q5VXU3 224 aa35.73■■■■□ 3.31
AC078880.1-201ENST00000546696 SENP3Q9H4L4 574 aaPredicted RBP31.75■■■□□ 2.67
AC078880.1-201ENST00000546696 PHF23Q9BUL5 403 aaPredicted RBP31.47■■■□□ 2.63
AC078880.1-201ENST00000546696 FOXD1Q16676 465 aa29.68■■■□□ 2.34
AC078880.1-201ENST00000546696 PLPPR3Q6T4P5 718 aa28.63■■■□□ 2.17
AC078880.1-201ENST00000546696 PPP6R1Q9UPN7 881 aa28.03■■■□□ 2.08
AC078880.1-201ENST00000546696 ADRA2BP18089 450 aa27.96■■■□□ 2.07
AC078880.1-201ENST00000546696 PIAS4Q8N2W9 510 aaPredicted RBP27.79■■■□□ 2.04
AC078880.1-201ENST00000546696 MSH5O43196 834 aa27.52■■■□□ 2
AC078880.1-201ENST00000546696 POTEDQ86YR6 584 aa26.53■■□□□ 1.84
AC078880.1-201ENST00000546696 MAPK8IP2Q13387 824 aaPredicted RBP25.63■■□□□ 1.69
AC078880.1-201ENST00000546696 SCAF1Q9H7N4 1312 aaKnown RBP25.36■■□□□ 1.65
AC078880.1-201ENST00000546696 DMRT2Q9Y5R5 561 aa25.25■■□□□ 1.63
AC078880.1-201ENST00000546696 PPP4R3CPQ6ZMV5 832 aa25.21■■□□□ 1.63
AC078880.1-201ENST00000546696 CNKSR2Q8WXI2 1034 aa24.59■■□□□ 1.53
AC078880.1-201ENST00000546696 HOXD11P31277 338 aaPredicted RBP24.4■■□□□ 1.5
AC078880.1-201ENST00000546696 NCBP3Q53F19 620 aaKnown RBP24.34■■□□□ 1.49
AC078880.1-201ENST00000546696 DCAF8L1A6NGE4 600 aa24.33■■□□□ 1.49
AC078880.1-201ENST00000546696 RNF216Q9NWF9 866 aaPredicted RBP24.29■■□□□ 1.48
AC078880.1-201ENST00000546696 NPM3O75607 178 aaKnown RBP23.99■■□□□ 1.43
AC078880.1-201ENST00000546696 KCNA4P22459 653 aa23.91■■□□□ 1.42
AC078880.1-201ENST00000546696 RNF39Q9H2S5 420 aa23.57■■□□□ 1.36
AC078880.1-201ENST00000546696 CACNB1Q02641 598 aaPredicted RBP23.55■■□□□ 1.36
AC078880.1-201ENST00000546696 DNAJC5BQ9UF47 199 aa23.38■■□□□ 1.33
AC078880.1-201ENST00000546696 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.32■■□□□ 1.32
AC078880.1-201ENST00000546696 C1QBPQ07021 282 aaKnown RBP23.18■■□□□ 1.3
AC078880.1-201ENST00000546696 U3KPZ7 1027 aaPredicted RBP22.89■■□□□ 1.25
AC078880.1-201ENST00000546696 SLC4A2P04920 1241 aa22.86■■□□□ 1.25
AC078880.1-201ENST00000546696 SLC4A1APQ9BWU0 796 aaKnown RBP22.69■■□□□ 1.22
AC078880.1-201ENST00000546696 SPINK5Q9NQ38 1064 aaPredicted RBP22.54■■□□□ 1.2
AC078880.1-201ENST00000546696 CAPN15O75808 1086 aa22.43■■□□□ 1.18
AC078880.1-201ENST00000546696 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
AC078880.1-201ENST00000546696 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
AC078880.1-201ENST00000546696 DSG3P32926 999 aa22.2■■□□□ 1.14
AC078880.1-201ENST00000546696 FOXD4L1Q9NU39 408 aa22.18■■□□□ 1.14
AC078880.1-201ENST00000546696 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
AC078880.1-201ENST00000546696 MYCNP04198 464 aaPredicted RBP22.15■■□□□ 1.14
AC078880.1-201ENST00000546696 APLP2Q06481 763 aa22.13■■□□□ 1.13
AC078880.1-201ENST00000546696 SAMD1Q6SPF0 538 aaPredicted RBP22.12■■□□□ 1.13
AC078880.1-201ENST00000546696 ABCB7O75027 752 aa22.01■■□□□ 1.11
AC078880.1-201ENST00000546696 ZNF219Q9P2Y4 722 aaPredicted RBP21.99■■□□□ 1.11
AC078880.1-201ENST00000546696 ZBTB22O15209 634 aa21.97■■□□□ 1.11
AC078880.1-201ENST00000546696 ATF5Q9Y2D1 282 aaPredicted RBP21.74■■□□□ 1.07
AC078880.1-201ENST00000546696 POLA2Q14181 598 aa21.61■■□□□ 1.05
AC078880.1-201ENST00000546696 ATXN8OSP0DMR3 200 aa21.49■■□□□ 1.03
AC078880.1-201ENST00000546696 CSRNP3Q8WYN3 585 aa21.43■■□□□ 1.02
AC078880.1-201ENST00000546696 EHMT2Q96KQ7 1210 aa21.4■■□□□ 1.02
AC078880.1-201ENST00000546696 ZBTB12Q9Y330 459 aaPredicted RBP21.06■□□□□ 0.96
AC078880.1-201ENST00000546696 RBM42Q9BTD8 480 aaKnown RBP21.05■□□□□ 0.96
AC078880.1-201ENST00000546696 OSCARQ8IYS5 282 aa20.94■□□□□ 0.94
AC078880.1-201ENST00000546696 POTEHQ6S545 545 aa20.82■□□□□ 0.92
AC078880.1-201ENST00000546696 FBLN2P98095 1184 aa20.74■□□□□ 0.91
AC078880.1-201ENST00000546696 MKRN4PQ13434 485 aaPredicted RBP20.71■□□□□ 0.91
AC078880.1-201ENST00000546696 AKT1S1Q96B36 256 aa20.67■□□□□ 0.9
AC078880.1-201ENST00000546696 CHRDL2Q6WN34 429 aa20.59■□□□□ 0.89
AC078880.1-201ENST00000546696 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
AC078880.1-201ENST00000546696 SPDYE2BA6NHP3 402 aa20.45■□□□□ 0.86
AC078880.1-201ENST00000546696 SPDYE6P0CI01 402 aa20.45■□□□□ 0.86
AC078880.1-201ENST00000546696 SPDYE2Q495Y8 402 aa20.45■□□□□ 0.86
AC078880.1-201ENST00000546696 PITPNM1O00562 1244 aa20.36■□□□□ 0.85
AC078880.1-201ENST00000546696 ZNF692Q9BU19 519 aaPredicted RBP20.33■□□□□ 0.85
AC078880.1-201ENST00000546696 SSUH2Q9Y2M2 353 aa20.25■□□□□ 0.83
AC078880.1-201ENST00000546696 PIP4P2Q8N4L2 257 aa20.19■□□□□ 0.82
AC078880.1-201ENST00000546696 CLEC11AQ9Y240 323 aa20.12■□□□□ 0.81
AC078880.1-201ENST00000546696 PABPN1Q86U42 306 aaKnown RBP eCLIP20.07■□□□□ 0.8
AC078880.1-201ENST00000546696 FXR2P51116 673 aaKnown RBP eCLIP20.06■□□□□ 0.8
AC078880.1-201ENST00000546696 SPDYE1Q8NFV5 336 aaPredicted RBP20.04■□□□□ 0.8
AC078880.1-201ENST00000546696 SPDYE4A6NLX3 237 aa19.9■□□□□ 0.78
AC078880.1-201ENST00000546696 PRKAR2AP13861 404 aaKnown RBP19.83■□□□□ 0.77
AC078880.1-201ENST00000546696 HAX1O00165 279 aa19.76■□□□□ 0.75
AC078880.1-201ENST00000546696 CHADLQ6NUI6 762 aa19.76■□□□□ 0.75
AC078880.1-201ENST00000546696 PRR29P0C7W0 189 aa19.75■□□□□ 0.75
AC078880.1-201ENST00000546696 SP7Q8TDD2 431 aaPredicted RBP19.63■□□□□ 0.73
AC078880.1-201ENST00000546696 EVX2Q03828 476 aa19.62■□□□□ 0.73
AC078880.1-201ENST00000546696 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
AC078880.1-201ENST00000546696 PROM2Q8N271 834 aa19.51■□□□□ 0.71
AC078880.1-201ENST00000546696 C19orf67A6NJJ6 358 aa19.41■□□□□ 0.7
AC078880.1-201ENST00000546696 FKBP8Q14318 412 aa19.4■□□□□ 0.7
AC078880.1-201ENST00000546696 FARP1Q9Y4F1 1045 aaPredicted RBP19.38■□□□□ 0.69
AC078880.1-201ENST00000546696 CREBZFQ9NS37 354 aa19.37■□□□□ 0.69
AC078880.1-201ENST00000546696 CD44P16070 742 aaKnown RBP19.21■□□□□ 0.67
AC078880.1-201ENST00000546696 GABBR2O75899 941 aa19.1■□□□□ 0.65
AC078880.1-201ENST00000546696 MNX1P50219 401 aaPredicted RBP19.06■□□□□ 0.64
AC078880.1-201ENST00000546696 ZRANB1Q9UGI0 708 aa19■□□□□ 0.63
AC078880.1-201ENST00000546696 NPM1P06748 294 aaKnown RBP eCLIP18.94■□□□□ 0.62
AC078880.1-201ENST00000546696 MIER1Q8N108 512 aa18.94■□□□□ 0.62
AC078880.1-201ENST00000546696 PLEKHG5O94827 1062 aa18.92■□□□□ 0.62
AC078880.1-201ENST00000546696 FBXO3Q9UK99 471 aa18.92■□□□□ 0.62
AC078880.1-201ENST00000546696 ZNF579Q8NAF0 562 aaKnown RBP18.87■□□□□ 0.61
AC078880.1-201ENST00000546696 PLCD3Q8N3E9 789 aa18.85■□□□□ 0.61
AC078880.1-201ENST00000546696 PHF12Q96QT6 1004 aa18.82■□□□□ 0.6
AC078880.1-201ENST00000546696 PAK3O75914 559 aaPredicted RBP18.8■□□□□ 0.6
AC078880.1-201ENST00000546696 POTEIP0CG38 1075 aa18.75■□□□□ 0.59
AC078880.1-201ENST00000546696 TSPYL2Q9H2G4 693 aaPredicted RBP18.74■□□□□ 0.59
AC078880.1-201ENST00000546696 GALR2O43603 387 aaPredicted RBP18.73■□□□□ 0.59
AC078880.1-201ENST00000546696 ZBTB47Q9UFB7 747 aaPredicted RBP18.72■□□□□ 0.59
AC078880.1-201ENST00000546696 CLCN6P51797 869 aa18.69■□□□□ 0.58
AC078880.1-201ENST00000546696 VASPP50552 380 aaPredicted RBP18.63■□□□□ 0.57
AC078880.1-201ENST00000546696 RASEFQ8IZ41 740 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms