RNA–Protein interactions for RNA: ENST00000546516.5

WDR90-204, Transcript of WD repeat domain 90, humanhuman

TSL 2

Gene WDR90, Length 3,593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR90-204ENST00000546516 NISCHQ9Y2I1 1504 aa25.78■■□□□ 1.72
WDR90-204ENST00000546516 SHROOM4Q9ULL8 1493 aa23.43■■□□□ 1.34
WDR90-204ENST00000546516 SUPT5HO00267 1087 aaKnown RBP23.34■■□□□ 1.33
WDR90-204ENST00000546516 DCAF8L2P0C7V8 631 aa23.12■■□□□ 1.29
WDR90-204ENST00000546516 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
WDR90-204ENST00000546516 HRCP23327 699 aa22.22■■□□□ 1.15
WDR90-204ENST00000546516 CHIC1Q5VXU3 224 aa22.21■■□□□ 1.15
WDR90-204ENST00000546516 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
WDR90-204ENST00000546516 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
WDR90-204ENST00000546516 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
WDR90-204ENST00000546516 MYO15BQ96JP2 1530 aa21.81■■□□□ 1.08
WDR90-204ENST00000546516 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
WDR90-204ENST00000546516 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
WDR90-204ENST00000546516 TRIM26Q12899 539 aaPredicted RBP21.57■■□□□ 1.04
WDR90-204ENST00000546516 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
WDR90-204ENST00000546516 ZEB1P37275 1124 aaPredicted RBP21.32■■□□□ 1
WDR90-204ENST00000546516 ABCC9O60706 1549 aa21.26■□□□□ 0.99
WDR90-204ENST00000546516 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
WDR90-204ENST00000546516 CCDC180Q9P1Z9 1646 aa21.25■□□□□ 0.99
WDR90-204ENST00000546516 TTBK1Q5TCY1 1321 aaPredicted RBP21.23■□□□□ 0.99
WDR90-204ENST00000546516 PELP1Q8IZL8 1130 aaKnown RBP21.08■□□□□ 0.97
WDR90-204ENST00000546516 CCER1Q8TC90 406 aaPredicted RBP21.08■□□□□ 0.96
WDR90-204ENST00000546516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.94■□□□□ 0.94
WDR90-204ENST00000546516 SCRIBQ14160 1630 aa20.79■□□□□ 0.92
WDR90-204ENST00000546516 CENPBP07199 599 aaPredicted RBP20.74■□□□□ 0.91
WDR90-204ENST00000546516 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
WDR90-204ENST00000546516 RSF1Q96T23 1441 aaPredicted RBP20.74■□□□□ 0.91
WDR90-204ENST00000546516 PABPN1Q86U42 306 aaKnown RBP eCLIP20.69■□□□□ 0.9
WDR90-204ENST00000546516 UBTFP17480 764 aaKnown RBP20.68■□□□□ 0.9
WDR90-204ENST00000546516 YTHDC1Q96MU7 727 aaKnown RBP20.65■□□□□ 0.9
WDR90-204ENST00000546516 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
WDR90-204ENST00000546516 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
WDR90-204ENST00000546516 GTF3C3Q9Y5Q9 886 aa20.52■□□□□ 0.88
WDR90-204ENST00000546516 ACIN1Q9UKV3 1341 aaKnown RBP20.52■□□□□ 0.87
WDR90-204ENST00000546516 NEUROD1Q13562 356 aa20.49■□□□□ 0.87
WDR90-204ENST00000546516 RB1CC1Q8TDY2 1594 aa20.48■□□□□ 0.87
WDR90-204ENST00000546516 APLP2Q06481 763 aa20.47■□□□□ 0.87
WDR90-204ENST00000546516 HNRNPUL2Q1KMD3 747 aaKnown RBP20.44■□□□□ 0.86
WDR90-204ENST00000546516 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
WDR90-204ENST00000546516 MYT1Q01538 1121 aa20.31■□□□□ 0.84
WDR90-204ENST00000546516 ZNF316A6NFI3 1004 aaPredicted RBP20.23■□□□□ 0.83
WDR90-204ENST00000546516 CSRNP3Q8WYN3 585 aa20.2■□□□□ 0.82
WDR90-204ENST00000546516 MROH2BQ7Z745 1585 aa20.18■□□□□ 0.82
WDR90-204ENST00000546516 CEP162Q5TB80 1403 aa20.09■□□□□ 0.81
WDR90-204ENST00000546516 NACADO15069 1562 aa20.03■□□□□ 0.8
WDR90-204ENST00000546516 WIZO95785 1651 aa20.02■□□□□ 0.8
WDR90-204ENST00000546516 MIER1Q8N108 512 aa20.01■□□□□ 0.79
WDR90-204ENST00000546516 ITGAEP38570 1179 aa19.99■□□□□ 0.79
WDR90-204ENST00000546516 SOGA1O94964 1423 aa19.98■□□□□ 0.79
WDR90-204ENST00000546516 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
WDR90-204ENST00000546516 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
WDR90-204ENST00000546516 TNIKQ9UKE5 1360 aa19.9■□□□□ 0.78
WDR90-204ENST00000546516 BAZ1AQ9NRL2 1556 aaPredicted RBP19.83■□□□□ 0.76
WDR90-204ENST00000546516 ATP1B4Q9UN42 357 aaPredicted RBP19.79■□□□□ 0.76
WDR90-204ENST00000546516 GOLGA3Q08378 1498 aa19.77■□□□□ 0.76
WDR90-204ENST00000546516 CLIP1P30622 1438 aa19.76■□□□□ 0.75
WDR90-204ENST00000546516 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
WDR90-204ENST00000546516 EEA1Q15075 1411 aa19.74■□□□□ 0.75
WDR90-204ENST00000546516 WRNQ14191 1432 aaPredicted RBP eCLIP19.73■□□□□ 0.75
WDR90-204ENST00000546516 BCANQ96GW7 911 aa19.65■□□□□ 0.74
WDR90-204ENST00000546516 TOP2AP11388 1531 aaKnown RBP19.61■□□□□ 0.73
WDR90-204ENST00000546516 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
WDR90-204ENST00000546516 NEFLP07196 543 aa19.56■□□□□ 0.72
WDR90-204ENST00000546516 FAM50AQ14320 339 aaKnown RBP19.52■□□□□ 0.72
WDR90-204ENST00000546516 VPS8Q8N3P4 1428 aa19.5■□□□□ 0.71
WDR90-204ENST00000546516 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
WDR90-204ENST00000546516 SMARCA4P51532 1647 aa19.47■□□□□ 0.71
WDR90-204ENST00000546516 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
WDR90-204ENST00000546516 KANK4Q5T7N3 995 aaPredicted RBP19.43■□□□□ 0.7
WDR90-204ENST00000546516 DDX10Q13206 875 aaKnown RBP19.42■□□□□ 0.7
WDR90-204ENST00000546516 P3H3Q8IVL6 736 aa19.4■□□□□ 0.7
WDR90-204ENST00000546516 RAPGEF2Q9Y4G8 1499 aa19.39■□□□□ 0.7
WDR90-204ENST00000546516 HIRIP3Q9BW71 556 aaPredicted RBP19.38■□□□□ 0.69
WDR90-204ENST00000546516 FKBP8Q14318 412 aa19.37■□□□□ 0.69
WDR90-204ENST00000546516 CLSPNQ9HAW4 1339 aa19.35■□□□□ 0.69
WDR90-204ENST00000546516 BCL11AQ9H165 835 aa19.33■□□□□ 0.68
WDR90-204ENST00000546516 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
WDR90-204ENST00000546516 UNC13AQ9UPW8 1703 aa19.3■□□□□ 0.68
WDR90-204ENST00000546516 TRIM52Q96A61 297 aa19.3■□□□□ 0.68
WDR90-204ENST00000546516 DHX57Q6P158 1386 aaKnown RBP19.29■□□□□ 0.68
WDR90-204ENST00000546516 EIF4G1Q04637 1599 aaKnown RBP19.28■□□□□ 0.68
WDR90-204ENST00000546516 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
WDR90-204ENST00000546516 KCNH8Q96L42 1107 aa19.27■□□□□ 0.68
WDR90-204ENST00000546516 ANP32CO43423 234 aa19.27■□□□□ 0.67
WDR90-204ENST00000546516 SIN3AQ96ST3 1273 aa19.24■□□□□ 0.67
WDR90-204ENST00000546516 BICRAQ9NZM4 1560 aa19.23■□□□□ 0.67
WDR90-204ENST00000546516 CCNB3Q8WWL7 1395 aa19.21■□□□□ 0.67
WDR90-204ENST00000546516 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
WDR90-204ENST00000546516 CNGB1Q14028 1251 aaPredicted RBP19.17■□□□□ 0.66
WDR90-204ENST00000546516 TSHZ2Q9NRE2 1034 aa19.17■□□□□ 0.66
WDR90-204ENST00000546516 ATAD2BQ9ULI0 1458 aa19.17■□□□□ 0.66
WDR90-204ENST00000546516 KIF21BO75037 1637 aa19.16■□□□□ 0.66
WDR90-204ENST00000546516 KIF27Q86VH2 1401 aa19.13■□□□□ 0.65
WDR90-204ENST00000546516 RAB3GAP2Q9H2M9 1393 aa19.1■□□□□ 0.65
WDR90-204ENST00000546516 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
WDR90-204ENST00000546516 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
WDR90-204ENST00000546516 TONSLQ96HA7 1378 aa19.06■□□□□ 0.64
WDR90-204ENST00000546516 HNRNPUQ00839 825 aaKnown RBP eCLIP19.05■□□□□ 0.64
WDR90-204ENST00000546516 POLR3GLQ9BT43 218 aa19.03■□□□□ 0.64
WDR90-204ENST00000546516 ARAP1Q96P48 1450 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms