RNA–Protein interactions for RNA: ENST00000546500.5

HNRNPA1-203, Transcript of heterogeneous nuclear ribonucleoprotein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HNRNPA1, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPA1-203ENST00000546500 NISCHQ9Y2I1 1504 aa22.73■■□□□ 1.23
HNRNPA1-203ENST00000546500 CCDC180Q9P1Z9 1646 aa19.67■□□□□ 0.74
HNRNPA1-203ENST00000546500 ZCCHC6Q5VYS8 1495 aaKnown RBP19.15■□□□□ 0.66
HNRNPA1-203ENST00000546500 SHROOM4Q9ULL8 1493 aa18.82■□□□□ 0.6
HNRNPA1-203ENST00000546500 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
HNRNPA1-203ENST00000546500 DCAF8L2P0C7V8 631 aa18.79■□□□□ 0.6
HNRNPA1-203ENST00000546500 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
HNRNPA1-203ENST00000546500 SUPT5HO00267 1087 aaKnown RBP18.33■□□□□ 0.52
HNRNPA1-203ENST00000546500 ABCC9O60706 1549 aa18.32■□□□□ 0.52
HNRNPA1-203ENST00000546500 NACADO15069 1562 aa18.27■□□□□ 0.52
HNRNPA1-203ENST00000546500 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
HNRNPA1-203ENST00000546500 RB1CC1Q8TDY2 1594 aa18.05■□□□□ 0.48
HNRNPA1-203ENST00000546500 RSF1Q96T23 1441 aaPredicted RBP17.76■□□□□ 0.43
HNRNPA1-203ENST00000546500 CHIC1Q5VXU3 224 aa17.67■□□□□ 0.42
HNRNPA1-203ENST00000546500 CECR2Q9BXF3 1484 aa17.6■□□□□ 0.41
HNRNPA1-203ENST00000546500 BAZ1AQ9NRL2 1556 aaPredicted RBP17.56■□□□□ 0.4
HNRNPA1-203ENST00000546500 MROH2BQ7Z745 1585 aa17.55■□□□□ 0.4
HNRNPA1-203ENST00000546500 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
HNRNPA1-203ENST00000546500 WIZO95785 1651 aa17.41■□□□□ 0.38
HNRNPA1-203ENST00000546500 SMARCA4P51532 1647 aa17.4■□□□□ 0.38
HNRNPA1-203ENST00000546500 BICRAQ9NZM4 1560 aa17.38■□□□□ 0.37
HNRNPA1-203ENST00000546500 PABPN1Q86U42 306 aaKnown RBP eCLIP17.35■□□□□ 0.37
HNRNPA1-203ENST00000546500 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
HNRNPA1-203ENST00000546500 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
HNRNPA1-203ENST00000546500 PEG3Q9GZU2 1588 aa17.15■□□□□ 0.34
HNRNPA1-203ENST00000546500 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
HNRNPA1-203ENST00000546500 CCDC88BA6NC98 1476 aa17.1■□□□□ 0.33
HNRNPA1-203ENST00000546500 EIF4G1Q04637 1599 aaKnown RBP17.04■□□□□ 0.32
HNRNPA1-203ENST00000546500 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
HNRNPA1-203ENST00000546500 BAZ1BQ9UIG0 1483 aaKnown RBP17.01■□□□□ 0.31
HNRNPA1-203ENST00000546500 LOC105371045A0A1W2PR82 267 aa16.99■□□□□ 0.31
HNRNPA1-203ENST00000546500 FAM9AQ8IZU1 332 aaPredicted RBP16.9■□□□□ 0.3
HNRNPA1-203ENST00000546500 HMGXB3Q12766 1538 aa16.85■□□□□ 0.29
HNRNPA1-203ENST00000546500 NCAPD3P42695 1498 aa16.85■□□□□ 0.29
HNRNPA1-203ENST00000546500 ABCC8Q09428 1581 aa16.83■□□□□ 0.29
HNRNPA1-203ENST00000546500 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
HNRNPA1-203ENST00000546500 EEA1Q15075 1411 aa16.76■□□□□ 0.27
HNRNPA1-203ENST00000546500 EHMT2Q96KQ7 1210 aa16.64■□□□□ 0.25
HNRNPA1-203ENST00000546500 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
HNRNPA1-203ENST00000546500 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
HNRNPA1-203ENST00000546500 SOGA1O94964 1423 aa16.6■□□□□ 0.25
HNRNPA1-203ENST00000546500 SYNJ1O43426 1573 aa16.6■□□□□ 0.25
HNRNPA1-203ENST00000546500 TRIM26Q12899 539 aaPredicted RBP16.59■□□□□ 0.25
HNRNPA1-203ENST00000546500 CFTRP13569 1480 aa16.56■□□□□ 0.24
HNRNPA1-203ENST00000546500 CC2D2AQ9P2K1 1620 aa16.55■□□□□ 0.24
HNRNPA1-203ENST00000546500 TOP2BQ02880 1626 aa16.53■□□□□ 0.24
HNRNPA1-203ENST00000546500 TNIKQ9UKE5 1360 aa16.52■□□□□ 0.23
HNRNPA1-203ENST00000546500 GOLGA3Q08378 1498 aa16.52■□□□□ 0.23
HNRNPA1-203ENST00000546500 BIVM-ERCC5R4GMW8 1640 aa16.5■□□□□ 0.23
HNRNPA1-203ENST00000546500 CEP164Q9UPV0 1460 aa16.48■□□□□ 0.23
HNRNPA1-203ENST00000546500 RUSC2Q8N2Y8 1516 aa16.48■□□□□ 0.23
HNRNPA1-203ENST00000546500 UBTFP17480 764 aaKnown RBP16.48■□□□□ 0.23
HNRNPA1-203ENST00000546500 CADPSQ9ULU8 1353 aa16.47■□□□□ 0.23
HNRNPA1-203ENST00000546500 PRDM2Q13029 1718 aa16.45■□□□□ 0.22
HNRNPA1-203ENST00000546500 HRCP23327 699 aa16.44■□□□□ 0.22
HNRNPA1-203ENST00000546500 KIF21BO75037 1637 aa16.44■□□□□ 0.22
HNRNPA1-203ENST00000546500 CEP162Q5TB80 1403 aa16.44■□□□□ 0.22
HNRNPA1-203ENST00000546500 CUX1P39880 1505 aa16.39■□□□□ 0.21
HNRNPA1-203ENST00000546500 KIF27Q86VH2 1401 aa16.35■□□□□ 0.21
HNRNPA1-203ENST00000546500 ERICH3Q5RHP9 1530 aa16.29■□□□□ 0.2
HNRNPA1-203ENST00000546500 FANCD2Q9BXW9 1451 aa16.28■□□□□ 0.2
HNRNPA1-203ENST00000546500 CLIP1P30622 1438 aa16.26■□□□□ 0.19
HNRNPA1-203ENST00000546500 RAPGEF2Q9Y4G8 1499 aa16.26■□□□□ 0.19
HNRNPA1-203ENST00000546500 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
HNRNPA1-203ENST00000546500 LAMC3Q9Y6N6 1575 aa16.23■□□□□ 0.19
HNRNPA1-203ENST00000546500 ZEB1P37275 1124 aaPredicted RBP16.2■□□□□ 0.18
HNRNPA1-203ENST00000546500 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
HNRNPA1-203ENST00000546500 CUX2O14529 1486 aa16.2■□□□□ 0.18
HNRNPA1-203ENST00000546500 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
HNRNPA1-203ENST00000546500 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
HNRNPA1-203ENST00000546500 APLP2Q06481 763 aa16.17■□□□□ 0.18
HNRNPA1-203ENST00000546500 PDS5BQ9NTI5 1447 aa16.16■□□□□ 0.18
HNRNPA1-203ENST00000546500 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
HNRNPA1-203ENST00000546500 NESP48681 1621 aa16.14■□□□□ 0.17
HNRNPA1-203ENST00000546500 TOPBP1Q92547 1522 aa16.12■□□□□ 0.17
HNRNPA1-203ENST00000546500 IGF1RP08069 1367 aa16.09■□□□□ 0.17
HNRNPA1-203ENST00000546500 CARMIL1Q5VZK9 1371 aa16.07■□□□□ 0.16
HNRNPA1-203ENST00000546500 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
HNRNPA1-203ENST00000546500 ABCA10Q8WWZ4 1543 aa16.07■□□□□ 0.16
HNRNPA1-203ENST00000546500 POLA1P09884 1462 aaPredicted RBP16.06■□□□□ 0.16
HNRNPA1-203ENST00000546500 TTBK1Q5TCY1 1321 aaPredicted RBP16.03■□□□□ 0.16
HNRNPA1-203ENST00000546500 URB2Q14146 1524 aaKnown RBP16.01■□□□□ 0.15
HNRNPA1-203ENST00000546500 RAD54L2Q9Y4B4 1467 aa16■□□□□ 0.15
HNRNPA1-203ENST00000546500 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
HNRNPA1-203ENST00000546500 CUL7Q14999 1698 aa15.97■□□□□ 0.15
HNRNPA1-203ENST00000546500 DNAJC5BQ9UF47 199 aa15.93■□□□□ 0.14
HNRNPA1-203ENST00000546500 KIF21AQ7Z4S6 1674 aa15.93■□□□□ 0.14
HNRNPA1-203ENST00000546500 ARHGAP35Q9NRY4 1499 aa15.92■□□□□ 0.14
HNRNPA1-203ENST00000546500 CCER1Q8TC90 406 aaPredicted RBP15.92■□□□□ 0.14
HNRNPA1-203ENST00000546500 WDR97A6NE52 1622 aa15.91■□□□□ 0.14
HNRNPA1-203ENST00000546500 MRC2Q9UBG0 1479 aa15.89■□□□□ 0.13
HNRNPA1-203ENST00000546500 GAPVD1Q14C86 1478 aa15.88■□□□□ 0.13
HNRNPA1-203ENST00000546500 ABCA5Q8WWZ7 1642 aa15.87■□□□□ 0.13
HNRNPA1-203ENST00000546500 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
HNRNPA1-203ENST00000546500 TDRD9Q8NDG6 1382 aaKnown RBP15.85■□□□□ 0.13
HNRNPA1-203ENST00000546500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
HNRNPA1-203ENST00000546500 EFCAB5A4FU69 1503 aa15.83■□□□□ 0.13
HNRNPA1-203ENST00000546500 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
HNRNPA1-203ENST00000546500 TARBP1Q13395 1621 aaKnown RBP15.8■□□□□ 0.12
HNRNPA1-203ENST00000546500 CTTNBP2Q8WZ74 1663 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms