RNA–Protein interactions for RNA: ENST00000546151.5

CYB561A3-221, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3 BASIC

Gene CYB561A3, Length 3,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-221ENST00000546151 NISCHQ9Y2I1 1504 aa18.54■□□□□ 0.56
CYB561A3-221ENST00000546151 DCAF8L2P0C7V8 631 aa16.96■□□□□ 0.31
CYB561A3-221ENST00000546151 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
CYB561A3-221ENST00000546151 SUPT5HO00267 1087 aaKnown RBP16.17■□□□□ 0.18
CYB561A3-221ENST00000546151 CCDC180Q9P1Z9 1646 aa15.75■□□□□ 0.11
CYB561A3-221ENST00000546151 ABCC9O60706 1549 aa15.67■□□□□ 0.1
CYB561A3-221ENST00000546151 ZCCHC6Q5VYS8 1495 aaKnown RBP15.47■□□□□ 0.07
CYB561A3-221ENST00000546151 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
CYB561A3-221ENST00000546151 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.02
CYB561A3-221ENST00000546151 SCRIBQ14160 1630 aa15.12■□□□□ 0.01
CYB561A3-221ENST00000546151 FAM9AQ8IZU1 332 aaPredicted RBP15.11■□□□□ 0.01
CYB561A3-221ENST00000546151 DCAF1Q9Y4B6 1507 aa15.06■□□□□ 0
CYB561A3-221ENST00000546151 PCGF6Q9BYE7 350 aa15.03■□□□□ -0
CYB561A3-221ENST00000546151 CHIC1Q5VXU3 224 aa14.99□□□□□ -0.01
CYB561A3-221ENST00000546151 NACADO15069 1562 aa14.97□□□□□ -0.01
CYB561A3-221ENST00000546151 TRIM41Q8WV44 630 aa14.94□□□□□ -0.02
CYB561A3-221ENST00000546151 RB1CC1Q8TDY2 1594 aa14.93□□□□□ -0.02
CYB561A3-221ENST00000546151 LOC105371045A0A1W2PR82 267 aa14.81□□□□□ -0.04
CYB561A3-221ENST00000546151 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
CYB561A3-221ENST00000546151 PPARGC1BQ86YN6 1023 aaKnown RBP14.72□□□□□ -0.05
CYB561A3-221ENST00000546151 CECR2Q9BXF3 1484 aa14.69□□□□□ -0.06
CYB561A3-221ENST00000546151 RSF1Q96T23 1441 aaPredicted RBP14.68□□□□□ -0.06
CYB561A3-221ENST00000546151 RANGAP1P46060 587 aaPredicted RBP14.64□□□□□ -0.07
CYB561A3-221ENST00000546151 TTBK1Q5TCY1 1321 aaPredicted RBP14.62□□□□□ -0.07
CYB561A3-221ENST00000546151 HRCP23327 699 aa14.54□□□□□ -0.08
CYB561A3-221ENST00000546151 UBTFP17480 764 aaKnown RBP14.49□□□□□ -0.09
CYB561A3-221ENST00000546151 MROH2BQ7Z745 1585 aa14.48□□□□□ -0.09
CYB561A3-221ENST00000546151 PELP1Q8IZL8 1130 aaKnown RBP14.45□□□□□ -0.1
CYB561A3-221ENST00000546151 BAZ1AQ9NRL2 1556 aaPredicted RBP14.41□□□□□ -0.1
CYB561A3-221ENST00000546151 WIZO95785 1651 aa14.32□□□□□ -0.12
CYB561A3-221ENST00000546151 APLP2Q06481 763 aa14.24□□□□□ -0.13
CYB561A3-221ENST00000546151 BAZ1BQ9UIG0 1483 aaKnown RBP14.22□□□□□ -0.13
CYB561A3-221ENST00000546151 ATP1B4Q9UN42 357 aaPredicted RBP14.18□□□□□ -0.14
CYB561A3-221ENST00000546151 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
CYB561A3-221ENST00000546151 CCDC88BA6NC98 1476 aa14.17□□□□□ -0.14
CYB561A3-221ENST00000546151 CSRNP3Q8WYN3 585 aa14.14□□□□□ -0.15
CYB561A3-221ENST00000546151 CCER1Q8TC90 406 aaPredicted RBP14.13□□□□□ -0.15
CYB561A3-221ENST00000546151 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
CYB561A3-221ENST00000546151 TRIM26Q12899 539 aaPredicted RBP14.11□□□□□ -0.15
CYB561A3-221ENST00000546151 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
CYB561A3-221ENST00000546151 ABCC8Q09428 1581 aa14.08□□□□□ -0.16
CYB561A3-221ENST00000546151 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
CYB561A3-221ENST00000546151 TOP2AP11388 1531 aaKnown RBP14.05□□□□□ -0.16
CYB561A3-221ENST00000546151 MYT1Q01538 1121 aa14.05□□□□□ -0.16
CYB561A3-221ENST00000546151 BICRAQ9NZM4 1560 aa14.04□□□□□ -0.16
CYB561A3-221ENST00000546151 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
CYB561A3-221ENST00000546151 UNC13AQ9UPW8 1703 aa13.98□□□□□ -0.17
CYB561A3-221ENST00000546151 SOGA1O94964 1423 aa13.98□□□□□ -0.17
CYB561A3-221ENST00000546151 ZEB1P37275 1124 aaPredicted RBP13.97□□□□□ -0.17
CYB561A3-221ENST00000546151 CENPBP07199 599 aaPredicted RBP13.96□□□□□ -0.17
CYB561A3-221ENST00000546151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
CYB561A3-221ENST00000546151 P3H3Q8IVL6 736 aa13.93□□□□□ -0.18
CYB561A3-221ENST00000546151 HNRNPUL2Q1KMD3 747 aaKnown RBP13.92□□□□□ -0.18
CYB561A3-221ENST00000546151 ITGAEP38570 1179 aa13.91□□□□□ -0.18
CYB561A3-221ENST00000546151 EIF4G1Q04637 1599 aaKnown RBP13.9□□□□□ -0.18
CYB561A3-221ENST00000546151 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
CYB561A3-221ENST00000546151 RUSC2Q8N2Y8 1516 aa13.85□□□□□ -0.19
CYB561A3-221ENST00000546151 DNAJC5BQ9UF47 199 aa13.83□□□□□ -0.19
CYB561A3-221ENST00000546151 EEA1Q15075 1411 aa13.83□□□□□ -0.2
CYB561A3-221ENST00000546151 FBLN2P98095 1184 aa13.82□□□□□ -0.2
CYB561A3-221ENST00000546151 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
CYB561A3-221ENST00000546151 GTF3C3Q9Y5Q9 886 aa13.79□□□□□ -0.2
CYB561A3-221ENST00000546151 ARID3CA6NKF2 412 aa13.77□□□□□ -0.2
CYB561A3-221ENST00000546151 CEP162Q5TB80 1403 aa13.76□□□□□ -0.21
CYB561A3-221ENST00000546151 SCAF1Q9H7N4 1312 aaKnown RBP13.73□□□□□ -0.21
CYB561A3-221ENST00000546151 KIF27Q86VH2 1401 aa13.72□□□□□ -0.21
CYB561A3-221ENST00000546151 DIEXFQ68CQ4 756 aaKnown RBP13.71□□□□□ -0.21
CYB561A3-221ENST00000546151 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
CYB561A3-221ENST00000546151 CLIP1P30622 1438 aa13.7□□□□□ -0.22
CYB561A3-221ENST00000546151 GOLGA3Q08378 1498 aa13.69□□□□□ -0.22
CYB561A3-221ENST00000546151 PDS5BQ9NTI5 1447 aa13.69□□□□□ -0.22
CYB561A3-221ENST00000546151 PEG3Q9GZU2 1588 aa13.68□□□□□ -0.22
CYB561A3-221ENST00000546151 TNIKQ9UKE5 1360 aa13.67□□□□□ -0.22
CYB561A3-221ENST00000546151 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
CYB561A3-221ENST00000546151 CUX2O14529 1486 aa13.67□□□□□ -0.22
CYB561A3-221ENST00000546151 FAM50AQ14320 339 aaKnown RBP13.64□□□□□ -0.23
CYB561A3-221ENST00000546151 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
CYB561A3-221ENST00000546151 NESP48681 1621 aa13.63□□□□□ -0.23
CYB561A3-221ENST00000546151 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
CYB561A3-221ENST00000546151 ERCC6Q03468 1493 aa13.61□□□□□ -0.23
CYB561A3-221ENST00000546151 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
CYB561A3-221ENST00000546151 NEUROD1Q13562 356 aa13.6□□□□□ -0.23
CYB561A3-221ENST00000546151 CFTRP13569 1480 aa13.59□□□□□ -0.23
CYB561A3-221ENST00000546151 FANCD2Q9BXW9 1451 aa13.59□□□□□ -0.23
CYB561A3-221ENST00000546151 RAPGEF2Q9Y4G8 1499 aa13.59□□□□□ -0.23
CYB561A3-221ENST00000546151 ACIN1Q9UKV3 1341 aaKnown RBP13.57□□□□□ -0.24
CYB561A3-221ENST00000546151 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
CYB561A3-221ENST00000546151 CHMP7Q8WUX9 453 aaPredicted RBP13.51□□□□□ -0.25
CYB561A3-221ENST00000546151 RAD54L2Q9Y4B4 1467 aa13.51□□□□□ -0.25
CYB561A3-221ENST00000546151 FGD5Q6ZNL6 1462 aa13.48□□□□□ -0.25
CYB561A3-221ENST00000546151 BCANQ96GW7 911 aa13.47□□□□□ -0.25
CYB561A3-221ENST00000546151 KANK4Q5T7N3 995 aaPredicted RBP13.47□□□□□ -0.25
CYB561A3-221ENST00000546151 CUX1P39880 1505 aa13.46□□□□□ -0.25
CYB561A3-221ENST00000546151 IGF1RP08069 1367 aa13.44□□□□□ -0.26
CYB561A3-221ENST00000546151 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
CYB561A3-221ENST00000546151 VPS8Q8N3P4 1428 aa13.39□□□□□ -0.27
CYB561A3-221ENST00000546151 TOP2BQ02880 1626 aa13.38□□□□□ -0.27
CYB561A3-221ENST00000546151 CDK11AQ9UQ88 783 aaPredicted RBP13.38□□□□□ -0.27
CYB561A3-221ENST00000546151 ZNF777Q9ULD5 760 aaPredicted RBP13.37□□□□□ -0.27
CYB561A3-221ENST00000546151 CNGB1Q14028 1251 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms