RNA–Protein interactions for RNA: ENST00000544123.5

EPB41L3-206, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EPB41L3, Length 3,972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-206ENST00000544123 NISCHQ9Y2I1 1504 aa28.75■■■□□ 2.19
EPB41L3-206ENST00000544123 SUPT5HO00267 1087 aaKnown RBP26.45■■□□□ 1.82
EPB41L3-206ENST00000544123 SHROOM4Q9ULL8 1493 aa26.44■■□□□ 1.82
EPB41L3-206ENST00000544123 DCAF8L2P0C7V8 631 aa26.2■■□□□ 1.78
EPB41L3-206ENST00000544123 PCGF6Q9BYE7 350 aa25.45■■□□□ 1.66
EPB41L3-206ENST00000544123 HRCP23327 699 aa25.1■■□□□ 1.61
EPB41L3-206ENST00000544123 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
EPB41L3-206ENST00000544123 EHMT2Q96KQ7 1210 aa24.91■■□□□ 1.58
EPB41L3-206ENST00000544123 PPARGC1BQ86YN6 1023 aaKnown RBP24.88■■□□□ 1.57
EPB41L3-206ENST00000544123 LOC105371045A0A1W2PR82 267 aa24.78■■□□□ 1.56
EPB41L3-206ENST00000544123 FAM9AQ8IZU1 332 aaPredicted RBP24.67■■□□□ 1.54
EPB41L3-206ENST00000544123 TRIM26Q12899 539 aaPredicted RBP24.4■■□□□ 1.5
EPB41L3-206ENST00000544123 MYO15BQ96JP2 1530 aa24.38■■□□□ 1.49
EPB41L3-206ENST00000544123 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
EPB41L3-206ENST00000544123 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
EPB41L3-206ENST00000544123 ZCCHC6Q5VYS8 1495 aaKnown RBP24.17■■□□□ 1.46
EPB41L3-206ENST00000544123 TTBK1Q5TCY1 1321 aaPredicted RBP24.14■■□□□ 1.45
EPB41L3-206ENST00000544123 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
EPB41L3-206ENST00000544123 DCAF1Q9Y4B6 1507 aa23.82■■□□□ 1.4
EPB41L3-206ENST00000544123 PELP1Q8IZL8 1130 aaKnown RBP23.8■■□□□ 1.4
EPB41L3-206ENST00000544123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.71■■□□□ 1.39
EPB41L3-206ENST00000544123 CENPBP07199 599 aaPredicted RBP23.6■■□□□ 1.37
EPB41L3-206ENST00000544123 CCDC180Q9P1Z9 1646 aa23.54■■□□□ 1.36
EPB41L3-206ENST00000544123 YTHDC1Q96MU7 727 aaKnown RBP23.5■■□□□ 1.35
EPB41L3-206ENST00000544123 UBTFP17480 764 aaKnown RBP23.47■■□□□ 1.35
EPB41L3-206ENST00000544123 SCAF1Q9H7N4 1312 aaKnown RBP23.43■■□□□ 1.34
EPB41L3-206ENST00000544123 RANGAP1P46060 587 aaPredicted RBP23.41■■□□□ 1.34
EPB41L3-206ENST00000544123 DIEXFQ68CQ4 756 aaKnown RBP23.38■■□□□ 1.33
EPB41L3-206ENST00000544123 APLP2Q06481 763 aa23.31■■□□□ 1.32
EPB41L3-206ENST00000544123 GTF3C3Q9Y5Q9 886 aa23.27■■□□□ 1.32
EPB41L3-206ENST00000544123 ACIN1Q9UKV3 1341 aaKnown RBP23.22■■□□□ 1.31
EPB41L3-206ENST00000544123 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
EPB41L3-206ENST00000544123 HNRNPUL2Q1KMD3 747 aaKnown RBP23.19■■□□□ 1.3
EPB41L3-206ENST00000544123 SCRIBQ14160 1630 aa23.17■■□□□ 1.3
EPB41L3-206ENST00000544123 NEUROD1Q13562 356 aa23.16■■□□□ 1.3
EPB41L3-206ENST00000544123 ABCC9O60706 1549 aa23.03■■□□□ 1.28
EPB41L3-206ENST00000544123 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
EPB41L3-206ENST00000544123 RB1CC1Q8TDY2 1594 aa22.82■■□□□ 1.24
EPB41L3-206ENST00000544123 MYT1Q01538 1121 aa22.79■■□□□ 1.24
EPB41L3-206ENST00000544123 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
EPB41L3-206ENST00000544123 CECR2Q9BXF3 1484 aa22.74■■□□□ 1.23
EPB41L3-206ENST00000544123 ITGAEP38570 1179 aa22.72■■□□□ 1.23
EPB41L3-206ENST00000544123 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.22
EPB41L3-206ENST00000544123 MIER1Q8N108 512 aa22.65■■□□□ 1.22
EPB41L3-206ENST00000544123 ATP1B4Q9UN42 357 aaPredicted RBP22.56■■□□□ 1.2
EPB41L3-206ENST00000544123 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
EPB41L3-206ENST00000544123 MROH2BQ7Z745 1585 aa22.52■■□□□ 1.2
EPB41L3-206ENST00000544123 SOGA1O94964 1423 aa22.4■■□□□ 1.18
EPB41L3-206ENST00000544123 BCANQ96GW7 911 aa22.35■■□□□ 1.17
EPB41L3-206ENST00000544123 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
EPB41L3-206ENST00000544123 CCDC88BA6NC98 1476 aa22.34■■□□□ 1.17
EPB41L3-206ENST00000544123 ABCC8Q09428 1581 aa22.32■■□□□ 1.16
EPB41L3-206ENST00000544123 WIZO95785 1651 aa22.31■■□□□ 1.16
EPB41L3-206ENST00000544123 NEFLP07196 543 aa22.31■■□□□ 1.16
EPB41L3-206ENST00000544123 CLIP1P30622 1438 aa22.22■■□□□ 1.15
EPB41L3-206ENST00000544123 NACADO15069 1562 aa22.2■■□□□ 1.14
EPB41L3-206ENST00000544123 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
EPB41L3-206ENST00000544123 FAM50AQ14320 339 aaKnown RBP22.14■■□□□ 1.14
EPB41L3-206ENST00000544123 EEA1Q15075 1411 aa22.13■■□□□ 1.13
EPB41L3-206ENST00000544123 BAZ1AQ9NRL2 1556 aaPredicted RBP22.13■■□□□ 1.13
EPB41L3-206ENST00000544123 RUSC2Q8N2Y8 1516 aa22.12■■□□□ 1.13
EPB41L3-206ENST00000544123 WRNQ14191 1432 aaPredicted RBP eCLIP22.1■■□□□ 1.13
EPB41L3-206ENST00000544123 ERICH6Q7L0X2 663 aa22.05■■□□□ 1.12
EPB41L3-206ENST00000544123 DDX10Q13206 875 aaKnown RBP22.03■■□□□ 1.12
EPB41L3-206ENST00000544123 FKBP8Q14318 412 aa21.99■■□□□ 1.11
EPB41L3-206ENST00000544123 P3H3Q8IVL6 736 aa21.98■■□□□ 1.11
EPB41L3-206ENST00000544123 SUPT16HQ9Y5B9 1047 aaKnown RBP21.97■■□□□ 1.11
EPB41L3-206ENST00000544123 HIRIP3Q9BW71 556 aaPredicted RBP21.96■■□□□ 1.11
EPB41L3-206ENST00000544123 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
EPB41L3-206ENST00000544123 TRIM52Q96A61 297 aa21.89■■□□□ 1.1
EPB41L3-206ENST00000544123 CLSPNQ9HAW4 1339 aa21.88■■□□□ 1.09
EPB41L3-206ENST00000544123 ANP32CO43423 234 aa21.88■■□□□ 1.09
EPB41L3-206ENST00000544123 CNGB1Q14028 1251 aaPredicted RBP21.88■■□□□ 1.09
EPB41L3-206ENST00000544123 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
EPB41L3-206ENST00000544123 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
EPB41L3-206ENST00000544123 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
EPB41L3-206ENST00000544123 KCNH8Q96L42 1107 aa21.75■■□□□ 1.07
EPB41L3-206ENST00000544123 SIN3AQ96ST3 1273 aa21.75■■□□□ 1.07
EPB41L3-206ENST00000544123 RAPGEF2Q9Y4G8 1499 aa21.72■■□□□ 1.07
EPB41L3-206ENST00000544123 POLR3GLQ9BT43 218 aa21.71■■□□□ 1.07
EPB41L3-206ENST00000544123 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
EPB41L3-206ENST00000544123 DHX57Q6P158 1386 aaKnown RBP21.67■■□□□ 1.06
EPB41L3-206ENST00000544123 TSHZ2Q9NRE2 1034 aa21.67■■□□□ 1.06
EPB41L3-206ENST00000544123 SMARCA4P51532 1647 aa21.66■■□□□ 1.06
EPB41L3-206ENST00000544123 ANP32EQ9BTT0 268 aa21.65■■□□□ 1.06
EPB41L3-206ENST00000544123 IRX6P78412 446 aaPredicted RBP21.64■■□□□ 1.05
EPB41L3-206ENST00000544123 BAZ1BQ9UIG0 1483 aaKnown RBP21.63■■□□□ 1.05
EPB41L3-206ENST00000544123 CCNB3Q8WWL7 1395 aa21.62■■□□□ 1.05
EPB41L3-206ENST00000544123 HNRNPUQ00839 825 aaKnown RBP eCLIP21.62■■□□□ 1.05
EPB41L3-206ENST00000544123 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
EPB41L3-206ENST00000544123 TONSLQ96HA7 1378 aa21.57■■□□□ 1.04
EPB41L3-206ENST00000544123 KIF27Q86VH2 1401 aa21.5■■□□□ 1.03
EPB41L3-206ENST00000544123 RAB3GAP2Q9H2M9 1393 aa21.49■■□□□ 1.03
EPB41L3-206ENST00000544123 ARID3CA6NKF2 412 aa21.49■■□□□ 1.03
EPB41L3-206ENST00000544123 FAM9BQ8IZU0 186 aa21.44■■□□□ 1.02
EPB41L3-206ENST00000544123 CHIC2Q9UKJ5 165 aa21.44■■□□□ 1.02
EPB41L3-206ENST00000544123 RBM19Q9Y4C8 960 aaKnown RBP21.42■■□□□ 1.02
EPB41L3-206ENST00000544123 KIF21BO75037 1637 aa21.41■■□□□ 1.02
EPB41L3-206ENST00000544123 SYNJ1O43426 1573 aa21.38■■□□□ 1.01
EPB41L3-206ENST00000544123 ZNF326Q5BKZ1 582 aaKnown RBP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms