RNA–Protein interactions for RNA: ENST00000542922.5

SLC3A2-220, Transcript of solute carrier family 3 member 2, humanhuman

TSL 2

Gene SLC3A2, Length 2,174 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-220ENST00000542922 NISCHQ9Y2I1 1504 aa29.36■■■□□ 2.29
SLC3A2-220ENST00000542922 CCDC180Q9P1Z9 1646 aa25.14■■□□□ 1.62
SLC3A2-220ENST00000542922 ZCCHC6Q5VYS8 1495 aaKnown RBP24.8■■□□□ 1.56
SLC3A2-220ENST00000542922 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
SLC3A2-220ENST00000542922 DCAF8L2P0C7V8 631 aa24.32■■□□□ 1.48
SLC3A2-220ENST00000542922 SUPT5HO00267 1087 aaKnown RBP24.12■■□□□ 1.45
SLC3A2-220ENST00000542922 DCAF1Q9Y4B6 1507 aa24.08■■□□□ 1.45
SLC3A2-220ENST00000542922 SCRIBQ14160 1630 aa23.52■■□□□ 1.36
SLC3A2-220ENST00000542922 ABCC9O60706 1549 aa23.5■■□□□ 1.35
SLC3A2-220ENST00000542922 MYO15BQ96JP2 1530 aa23.48■■□□□ 1.35
SLC3A2-220ENST00000542922 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
SLC3A2-220ENST00000542922 NACADO15069 1562 aa23.26■■□□□ 1.31
SLC3A2-220ENST00000542922 RSF1Q96T23 1441 aaPredicted RBP23.11■■□□□ 1.29
SLC3A2-220ENST00000542922 RB1CC1Q8TDY2 1594 aa22.95■■□□□ 1.26
SLC3A2-220ENST00000542922 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
SLC3A2-220ENST00000542922 MROH2BQ7Z745 1585 aa22.84■■□□□ 1.25
SLC3A2-220ENST00000542922 WIZO95785 1651 aa22.73■■□□□ 1.23
SLC3A2-220ENST00000542922 UNC13AQ9UPW8 1703 aa22.73■■□□□ 1.23
SLC3A2-220ENST00000542922 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
SLC3A2-220ENST00000542922 BAZ1AQ9NRL2 1556 aaPredicted RBP22.56■■□□□ 1.2
SLC3A2-220ENST00000542922 TRIM41Q8WV44 630 aa22.46■■□□□ 1.19
SLC3A2-220ENST00000542922 SMARCA4P51532 1647 aa22.45■■□□□ 1.19
SLC3A2-220ENST00000542922 BICRAQ9NZM4 1560 aa22.4■■□□□ 1.18
SLC3A2-220ENST00000542922 PABPN1Q86U42 306 aaKnown RBP eCLIP22.38■■□□□ 1.17
SLC3A2-220ENST00000542922 TOP2AP11388 1531 aaKnown RBP22.33■■□□□ 1.17
SLC3A2-220ENST00000542922 EIF4G1Q04637 1599 aaKnown RBP22.33■■□□□ 1.17
SLC3A2-220ENST00000542922 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
SLC3A2-220ENST00000542922 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
SLC3A2-220ENST00000542922 SMARCA2P51531 1590 aa22.22■■□□□ 1.15
SLC3A2-220ENST00000542922 CCDC88BA6NC98 1476 aa22.21■■□□□ 1.15
SLC3A2-220ENST00000542922 EHMT2Q96KQ7 1210 aa22.15■■□□□ 1.14
SLC3A2-220ENST00000542922 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
SLC3A2-220ENST00000542922 HRCP23327 699 aa22.08■■□□□ 1.12
SLC3A2-220ENST00000542922 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
SLC3A2-220ENST00000542922 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
SLC3A2-220ENST00000542922 TRIM26Q12899 539 aaPredicted RBP21.89■■□□□ 1.1
SLC3A2-220ENST00000542922 BAZ1BQ9UIG0 1483 aaKnown RBP21.82■■□□□ 1.08
SLC3A2-220ENST00000542922 SOGA1O94964 1423 aa21.79■■□□□ 1.08
SLC3A2-220ENST00000542922 RUSC2Q8N2Y8 1516 aa21.73■■□□□ 1.07
SLC3A2-220ENST00000542922 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
SLC3A2-220ENST00000542922 WRNQ14191 1432 aaPredicted RBP eCLIP21.7■■□□□ 1.06
SLC3A2-220ENST00000542922 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
SLC3A2-220ENST00000542922 EEA1Q15075 1411 aa21.56■■□□□ 1.04
SLC3A2-220ENST00000542922 CSRNP3Q8WYN3 585 aa21.56■■□□□ 1.04
SLC3A2-220ENST00000542922 CEP162Q5TB80 1403 aa21.54■■□□□ 1.04
SLC3A2-220ENST00000542922 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
SLC3A2-220ENST00000542922 NCAPD3P42695 1498 aa21.51■■□□□ 1.03
SLC3A2-220ENST00000542922 TNIKQ9UKE5 1360 aa21.49■■□□□ 1.03
SLC3A2-220ENST00000542922 GOLGA3Q08378 1498 aa21.44■■□□□ 1.02
SLC3A2-220ENST00000542922 UBTFP17480 764 aaKnown RBP21.44■■□□□ 1.02
SLC3A2-220ENST00000542922 TOP2BQ02880 1626 aa21.41■■□□□ 1.02
SLC3A2-220ENST00000542922 KIF21BO75037 1637 aa21.37■■□□□ 1.01
SLC3A2-220ENST00000542922 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
SLC3A2-220ENST00000542922 TTBK1Q5TCY1 1321 aaPredicted RBP21.36■■□□□ 1.01
SLC3A2-220ENST00000542922 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
SLC3A2-220ENST00000542922 RAPGEF2Q9Y4G8 1499 aa21.29■■□□□ 1
SLC3A2-220ENST00000542922 CUX1P39880 1505 aa21.29■■□□□ 1
SLC3A2-220ENST00000542922 CFTRP13569 1480 aa21.27■■□□□ 1
SLC3A2-220ENST00000542922 ZEB1P37275 1124 aaPredicted RBP21.21■□□□□ 0.99
SLC3A2-220ENST00000542922 CC2D2AQ9P2K1 1620 aa21.19■□□□□ 0.98
SLC3A2-220ENST00000542922 CLIP1P30622 1438 aa21.18■□□□□ 0.98
SLC3A2-220ENST00000542922 PRDM2Q13029 1718 aa21.17■□□□□ 0.98
SLC3A2-220ENST00000542922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.13■□□□□ 0.97
SLC3A2-220ENST00000542922 RANGAP1P46060 587 aaPredicted RBP21.13■□□□□ 0.97
SLC3A2-220ENST00000542922 PRXQ9BXM0 1461 aa21.09■□□□□ 0.97
SLC3A2-220ENST00000542922 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
SLC3A2-220ENST00000542922 VPS8Q8N3P4 1428 aa21.06■□□□□ 0.96
SLC3A2-220ENST00000542922 ERICH3Q5RHP9 1530 aa21.06■□□□□ 0.96
SLC3A2-220ENST00000542922 KIF27Q86VH2 1401 aa21.03■□□□□ 0.96
SLC3A2-220ENST00000542922 CCER1Q8TC90 406 aaPredicted RBP21■□□□□ 0.95
SLC3A2-220ENST00000542922 ARAP1Q96P48 1450 aa20.94■□□□□ 0.94
SLC3A2-220ENST00000542922 CUX2O14529 1486 aa20.93■□□□□ 0.94
SLC3A2-220ENST00000542922 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
SLC3A2-220ENST00000542922 FANCD2Q9BXW9 1451 aa20.9■□□□□ 0.94
SLC3A2-220ENST00000542922 NESP48681 1621 aa20.89■□□□□ 0.93
SLC3A2-220ENST00000542922 IGF1RP08069 1367 aa20.85■□□□□ 0.93
SLC3A2-220ENST00000542922 APLP2Q06481 763 aa20.83■□□□□ 0.93
SLC3A2-220ENST00000542922 HNRNPUL2Q1KMD3 747 aaKnown RBP20.82■□□□□ 0.92
SLC3A2-220ENST00000542922 ARHGAP35Q9NRY4 1499 aa20.79■□□□□ 0.92
SLC3A2-220ENST00000542922 DNMBPQ6XZF7 1577 aa20.77■□□□□ 0.92
SLC3A2-220ENST00000542922 RAD54L2Q9Y4B4 1467 aa20.76■□□□□ 0.91
SLC3A2-220ENST00000542922 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
SLC3A2-220ENST00000542922 DNAJC5BQ9UF47 199 aa20.75■□□□□ 0.91
SLC3A2-220ENST00000542922 KANK4Q5T7N3 995 aaPredicted RBP20.74■□□□□ 0.91
SLC3A2-220ENST00000542922 CARMIL1Q5VZK9 1371 aa20.74■□□□□ 0.91
SLC3A2-220ENST00000542922 POLA1P09884 1462 aaPredicted RBP20.72■□□□□ 0.91
SLC3A2-220ENST00000542922 ABCA10Q8WWZ4 1543 aa20.66■□□□□ 0.9
SLC3A2-220ENST00000542922 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
SLC3A2-220ENST00000542922 URB2Q14146 1524 aaKnown RBP20.65■□□□□ 0.9
SLC3A2-220ENST00000542922 WDR97A6NE52 1622 aa20.58■□□□□ 0.88
SLC3A2-220ENST00000542922 KIF21AQ7Z4S6 1674 aa20.56■□□□□ 0.88
SLC3A2-220ENST00000542922 RRBP1Q9P2E9 1410 aaKnown RBP20.52■□□□□ 0.88
SLC3A2-220ENST00000542922 P3H3Q8IVL6 736 aa20.52■□□□□ 0.88
SLC3A2-220ENST00000542922 CUL7Q14999 1698 aa20.52■□□□□ 0.88
SLC3A2-220ENST00000542922 TIAM1Q13009 1591 aa20.51■□□□□ 0.87
SLC3A2-220ENST00000542922 TDRD9Q8NDG6 1382 aaKnown RBP20.49■□□□□ 0.87
SLC3A2-220ENST00000542922 PCF11O94913 1555 aaKnown RBP20.49■□□□□ 0.87
SLC3A2-220ENST00000542922 PDS5BQ9NTI5 1447 aa20.48■□□□□ 0.87
SLC3A2-220ENST00000542922 ABCA5Q8WWZ7 1642 aa20.48■□□□□ 0.87
SLC3A2-220ENST00000542922 CTTNBP2Q8WZ74 1663 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms