RNA–Protein interactions for RNA: ENST00000542672.5

ACTN2-206, Transcript of actinin alpha 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN2, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN2-206ENST00000542672 DCAF8L2P0C7V8 631 aa26.46■■□□□ 1.83
ACTN2-206ENST00000542672 NISCHQ9Y2I1 1504 aa25.86■■□□□ 1.73
ACTN2-206ENST00000542672 SUPT5HO00267 1087 aaKnown RBP25.09■■□□□ 1.61
ACTN2-206ENST00000542672 SHROOM4Q9ULL8 1493 aa24.8■■□□□ 1.56
ACTN2-206ENST00000542672 EHMT2Q96KQ7 1210 aa24.12■■□□□ 1.45
ACTN2-206ENST00000542672 FAM9AQ8IZU1 332 aaPredicted RBP23.63■■□□□ 1.37
ACTN2-206ENST00000542672 APLP2Q06481 763 aa23.49■■□□□ 1.35
ACTN2-206ENST00000542672 TTBK1Q5TCY1 1321 aaPredicted RBP23.25■■□□□ 1.31
ACTN2-206ENST00000542672 TRIM41Q8WV44 630 aa23.22■■□□□ 1.31
ACTN2-206ENST00000542672 PCGF6Q9BYE7 350 aa23.16■■□□□ 1.3
ACTN2-206ENST00000542672 RANGAP1P46060 587 aaPredicted RBP23.12■■□□□ 1.29
ACTN2-206ENST00000542672 UBTFP17480 764 aaKnown RBP22.89■■□□□ 1.25
ACTN2-206ENST00000542672 ATP1B4Q9UN42 357 aaPredicted RBP22.83■■□□□ 1.24
ACTN2-206ENST00000542672 PELP1Q8IZL8 1130 aaKnown RBP22.69■■□□□ 1.22
ACTN2-206ENST00000542672 CCER1Q8TC90 406 aaPredicted RBP22.68■■□□□ 1.22
ACTN2-206ENST00000542672 ZEB1P37275 1124 aaPredicted RBP22.56■■□□□ 1.2
ACTN2-206ENST00000542672 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
ACTN2-206ENST00000542672 CHIC1Q5VXU3 224 aa22.4■■□□□ 1.18
ACTN2-206ENST00000542672 LOC105371045A0A1W2PR82 267 aa22.34■■□□□ 1.17
ACTN2-206ENST00000542672 ABCC9O60706 1549 aa22.31■■□□□ 1.16
ACTN2-206ENST00000542672 CENPBP07199 599 aaPredicted RBP22.27■■□□□ 1.16
ACTN2-206ENST00000542672 TRIM26Q12899 539 aaPredicted RBP22.24■■□□□ 1.15
ACTN2-206ENST00000542672 PABPN1Q86U42 306 aaKnown RBP eCLIP22.19■■□□□ 1.14
ACTN2-206ENST00000542672 ITGAEP38570 1179 aa22.11■■□□□ 1.13
ACTN2-206ENST00000542672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
ACTN2-206ENST00000542672 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
ACTN2-206ENST00000542672 YTHDC1Q96MU7 727 aaKnown RBP22■■□□□ 1.11
ACTN2-206ENST00000542672 HRCP23327 699 aa21.88■■□□□ 1.09
ACTN2-206ENST00000542672 MYT1LQ9UL68 1186 aa21.87■■□□□ 1.09
ACTN2-206ENST00000542672 NEFLP07196 543 aa21.81■■□□□ 1.08
ACTN2-206ENST00000542672 ERICH6Q7L0X2 663 aa21.72■■□□□ 1.07
ACTN2-206ENST00000542672 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
ACTN2-206ENST00000542672 FAM50AQ14320 339 aaKnown RBP21.57■■□□□ 1.04
ACTN2-206ENST00000542672 CNGB1Q14028 1251 aaPredicted RBP21.53■■□□□ 1.04
ACTN2-206ENST00000542672 FBLN2P98095 1184 aa21.42■■□□□ 1.02
ACTN2-206ENST00000542672 ZCCHC6Q5VYS8 1495 aaKnown RBP21.39■■□□□ 1.01
ACTN2-206ENST00000542672 TRIM52Q96A61 297 aa21.38■■□□□ 1.01
ACTN2-206ENST00000542672 CSRNP3Q8WYN3 585 aa21.38■■□□□ 1.01
ACTN2-206ENST00000542672 SCRIBQ14160 1630 aa21.36■■□□□ 1.01
ACTN2-206ENST00000542672 DIEXFQ68CQ4 756 aaKnown RBP21.32■■□□□ 1
ACTN2-206ENST00000542672 NEUROD1Q13562 356 aa21.31■■□□□ 1
ACTN2-206ENST00000542672 P3H3Q8IVL6 736 aa21.29■■□□□ 1
ACTN2-206ENST00000542672 SLC4A1APQ9BWU0 796 aaKnown RBP21.25■□□□□ 0.99
ACTN2-206ENST00000542672 ARID3CA6NKF2 412 aa21.19■□□□□ 0.98
ACTN2-206ENST00000542672 ZNF326Q5BKZ1 582 aaKnown RBP21.12■□□□□ 0.97
ACTN2-206ENST00000542672 CCDC180Q9P1Z9 1646 aa21.06■□□□□ 0.96
ACTN2-206ENST00000542672 DAXXQ9UER7 740 aaPredicted RBP21.01■□□□□ 0.95
ACTN2-206ENST00000542672 ZNF777Q9ULD5 760 aaPredicted RBP20.97■□□□□ 0.95
ACTN2-206ENST00000542672 CDK11AQ9UQ88 783 aaPredicted RBP20.92■□□□□ 0.94
ACTN2-206ENST00000542672 ZNF316A6NFI3 1004 aaPredicted RBP20.92■□□□□ 0.94
ACTN2-206ENST00000542672 ANP32CO43423 234 aa20.91■□□□□ 0.94
ACTN2-206ENST00000542672 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
ACTN2-206ENST00000542672 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
ACTN2-206ENST00000542672 RSF1Q96T23 1441 aaPredicted RBP20.76■□□□□ 0.91
ACTN2-206ENST00000542672 BCANQ96GW7 911 aa20.74■□□□□ 0.91
ACTN2-206ENST00000542672 GTF3C3Q9Y5Q9 886 aa20.71■□□□□ 0.91
ACTN2-206ENST00000542672 DCAF1Q9Y4B6 1507 aa20.7■□□□□ 0.9
ACTN2-206ENST00000542672 MYT1Q01538 1121 aa20.68■□□□□ 0.9
ACTN2-206ENST00000542672 CHIC2Q9UKJ5 165 aa20.64■□□□□ 0.89
ACTN2-206ENST00000542672 TONSLQ96HA7 1378 aa20.62■□□□□ 0.89
ACTN2-206ENST00000542672 NACADO15069 1562 aa20.6■□□□□ 0.89
ACTN2-206ENST00000542672 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
ACTN2-206ENST00000542672 CHMP7Q8WUX9 453 aaPredicted RBP20.59■□□□□ 0.89
ACTN2-206ENST00000542672 CLIP1P30622 1438 aa20.58■□□□□ 0.89
ACTN2-206ENST00000542672 MTUS2Q5JR59 1369 aa20.55■□□□□ 0.88
ACTN2-206ENST00000542672 CHGAP10645 457 aaKnown RBP20.55■□□□□ 0.88
ACTN2-206ENST00000542672 ESF1Q9H501 851 aaKnown RBP20.52■□□□□ 0.88
ACTN2-206ENST00000542672 WRNQ14191 1432 aaPredicted RBP eCLIP20.49■□□□□ 0.87
ACTN2-206ENST00000542672 BAZ1BQ9UIG0 1483 aaKnown RBP20.49■□□□□ 0.87
ACTN2-206ENST00000542672 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.49■□□□□ 0.87
ACTN2-206ENST00000542672 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
ACTN2-206ENST00000542672 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
ACTN2-206ENST00000542672 MYO15BQ96JP2 1530 aa20.47■□□□□ 0.87
ACTN2-206ENST00000542672 DDX10Q13206 875 aaKnown RBP20.47■□□□□ 0.87
ACTN2-206ENST00000542672 RTL5Q5HYW3 569 aaPredicted RBP20.47■□□□□ 0.87
ACTN2-206ENST00000542672 NEFMP07197 916 aa20.46■□□□□ 0.87
ACTN2-206ENST00000542672 ACIN1Q9UKV3 1341 aaKnown RBP20.46■□□□□ 0.87
ACTN2-206ENST00000542672 SLC24A1O60721 1099 aa20.46■□□□□ 0.87
ACTN2-206ENST00000542672 EEA1Q15075 1411 aa20.45■□□□□ 0.86
ACTN2-206ENST00000542672 CANXP27824 592 aaKnown RBP20.45■□□□□ 0.86
ACTN2-206ENST00000542672 STAG3Q9UJ98 1225 aa20.44■□□□□ 0.86
ACTN2-206ENST00000542672 ZBTB47Q9UFB7 747 aaPredicted RBP20.41■□□□□ 0.86
ACTN2-206ENST00000542672 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
ACTN2-206ENST00000542672 GOLGA3Q08378 1498 aa20.4■□□□□ 0.86
ACTN2-206ENST00000542672 CECR2Q9BXF3 1484 aa20.39■□□□□ 0.85
ACTN2-206ENST00000542672 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
ACTN2-206ENST00000542672 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
ACTN2-206ENST00000542672 RRP7BPQ9NSQ0 103 aa20.35■□□□□ 0.85
ACTN2-206ENST00000542672 KDM2AQ9Y2K7 1162 aa20.34■□□□□ 0.85
ACTN2-206ENST00000542672 KIF27Q86VH2 1401 aa20.33■□□□□ 0.85
ACTN2-206ENST00000542672 HNRNPUQ00839 825 aaKnown RBP eCLIP20.32■□□□□ 0.84
ACTN2-206ENST00000542672 BAZ1AQ9NRL2 1556 aaPredicted RBP20.32■□□□□ 0.84
ACTN2-206ENST00000542672 FAM9BQ8IZU0 186 aa20.31■□□□□ 0.84
ACTN2-206ENST00000542672 KCNH8Q96L42 1107 aa20.31■□□□□ 0.84
ACTN2-206ENST00000542672 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
ACTN2-206ENST00000542672 HIRIP3Q9BW71 556 aaPredicted RBP20.27■□□□□ 0.84
ACTN2-206ENST00000542672 TNIKQ9UKE5 1360 aa20.26■□□□□ 0.83
ACTN2-206ENST00000542672 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
ACTN2-206ENST00000542672 CEP164Q9UPV0 1460 aa20.23■□□□□ 0.83
ACTN2-206ENST00000542672 FKBP8Q14318 412 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms