RNA–Protein interactions for RNA: ENST00000542536.6

SRP68-203, Transcript of signal recognition particle 68, humanhuman

TSL 2

Gene SRP68, Length 1,714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP68-203ENST00000542536 NISCHQ9Y2I1 1504 aa25.66■■□□□ 1.7
SRP68-203ENST00000542536 CCDC180Q9P1Z9 1646 aa22.12■■□□□ 1.13
SRP68-203ENST00000542536 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
SRP68-203ENST00000542536 DCAF1Q9Y4B6 1507 aa21.25■□□□□ 0.99
SRP68-203ENST00000542536 SHROOM4Q9ULL8 1493 aa21.19■□□□□ 0.98
SRP68-203ENST00000542536 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
SRP68-203ENST00000542536 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.92
SRP68-203ENST00000542536 SUPT5HO00267 1087 aaKnown RBP20.64■□□□□ 0.89
SRP68-203ENST00000542536 NACADO15069 1562 aa20.51■□□□□ 0.87
SRP68-203ENST00000542536 ABCC9O60706 1549 aa20.47■□□□□ 0.87
SRP68-203ENST00000542536 SCRIBQ14160 1630 aa20.37■□□□□ 0.85
SRP68-203ENST00000542536 RB1CC1Q8TDY2 1594 aa20.19■□□□□ 0.82
SRP68-203ENST00000542536 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
SRP68-203ENST00000542536 CHIC1Q5VXU3 224 aa20.08■□□□□ 0.81
SRP68-203ENST00000542536 CECR2Q9BXF3 1484 aa19.9■□□□□ 0.78
SRP68-203ENST00000542536 MROH2BQ7Z745 1585 aa19.84■□□□□ 0.77
SRP68-203ENST00000542536 UNC13AQ9UPW8 1703 aa19.8■□□□□ 0.76
SRP68-203ENST00000542536 BAZ1AQ9NRL2 1556 aaPredicted RBP19.76■□□□□ 0.75
SRP68-203ENST00000542536 WIZO95785 1651 aa19.67■□□□□ 0.74
SRP68-203ENST00000542536 BICRAQ9NZM4 1560 aa19.62■□□□□ 0.73
SRP68-203ENST00000542536 SMARCA4P51532 1647 aa19.6■□□□□ 0.73
SRP68-203ENST00000542536 TOP2AP11388 1531 aaKnown RBP19.5■□□□□ 0.71
SRP68-203ENST00000542536 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.7
SRP68-203ENST00000542536 TRIM41Q8WV44 630 aa19.39■□□□□ 0.7
SRP68-203ENST00000542536 EIF4G1Q04637 1599 aaKnown RBP19.39■□□□□ 0.69
SRP68-203ENST00000542536 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
SRP68-203ENST00000542536 SMARCA2P51531 1590 aa19.33■□□□□ 0.69
SRP68-203ENST00000542536 CCDC88BA6NC98 1476 aa19.32■□□□□ 0.68
SRP68-203ENST00000542536 LOC105371045A0A1W2PR82 267 aa19.3■□□□□ 0.68
SRP68-203ENST00000542536 ATAD2BQ9ULI0 1458 aa19.19■□□□□ 0.66
SRP68-203ENST00000542536 BAZ1BQ9UIG0 1483 aaKnown RBP19.07■□□□□ 0.64
SRP68-203ENST00000542536 ABCC8Q09428 1581 aa19.03■□□□□ 0.64
SRP68-203ENST00000542536 FAM9AQ8IZU1 332 aaPredicted RBP19.01■□□□□ 0.63
SRP68-203ENST00000542536 NCAPD3P42695 1498 aa18.96■□□□□ 0.63
SRP68-203ENST00000542536 HMGXB3Q12766 1538 aa18.95■□□□□ 0.62
SRP68-203ENST00000542536 PCGF6Q9BYE7 350 aa18.89■□□□□ 0.61
SRP68-203ENST00000542536 WRNQ14191 1432 aaPredicted RBP eCLIP18.88■□□□□ 0.61
SRP68-203ENST00000542536 EEA1Q15075 1411 aa18.88■□□□□ 0.61
SRP68-203ENST00000542536 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
SRP68-203ENST00000542536 SOGA1O94964 1423 aa18.8■□□□□ 0.6
SRP68-203ENST00000542536 HRCP23327 699 aa18.79■□□□□ 0.6
SRP68-203ENST00000542536 SYNJ1O43426 1573 aa18.77■□□□□ 0.6
SRP68-203ENST00000542536 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
SRP68-203ENST00000542536 RUSC2Q8N2Y8 1516 aa18.71■□□□□ 0.59
SRP68-203ENST00000542536 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
SRP68-203ENST00000542536 EHMT2Q96KQ7 1210 aa18.68■□□□□ 0.58
SRP68-203ENST00000542536 TOP2BQ02880 1626 aa18.67■□□□□ 0.58
SRP68-203ENST00000542536 CFTRP13569 1480 aa18.66■□□□□ 0.58
SRP68-203ENST00000542536 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
SRP68-203ENST00000542536 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
SRP68-203ENST00000542536 KIF21BO75037 1637 aa18.59■□□□□ 0.57
SRP68-203ENST00000542536 CEP162Q5TB80 1403 aa18.58■□□□□ 0.57
SRP68-203ENST00000542536 CEP164Q9UPV0 1460 aa18.57■□□□□ 0.56
SRP68-203ENST00000542536 CC2D2AQ9P2K1 1620 aa18.55■□□□□ 0.56
SRP68-203ENST00000542536 PRDM2Q13029 1718 aa18.53■□□□□ 0.56
SRP68-203ENST00000542536 CUX1P39880 1505 aa18.51■□□□□ 0.55
SRP68-203ENST00000542536 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
SRP68-203ENST00000542536 UBTFP17480 764 aaKnown RBP18.47■□□□□ 0.55
SRP68-203ENST00000542536 PRXQ9BXM0 1461 aa18.39■□□□□ 0.54
SRP68-203ENST00000542536 RAPGEF2Q9Y4G8 1499 aa18.39■□□□□ 0.54
SRP68-203ENST00000542536 ERICH3Q5RHP9 1530 aa18.39■□□□□ 0.53
SRP68-203ENST00000542536 KIF27Q86VH2 1401 aa18.36■□□□□ 0.53
SRP68-203ENST00000542536 CLIP1P30622 1438 aa18.33■□□□□ 0.52
SRP68-203ENST00000542536 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
SRP68-203ENST00000542536 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
SRP68-203ENST00000542536 FANCD2Q9BXW9 1451 aa18.27■□□□□ 0.51
SRP68-203ENST00000542536 VPS8Q8N3P4 1428 aa18.25■□□□□ 0.51
SRP68-203ENST00000542536 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
SRP68-203ENST00000542536 LAMC3Q9Y6N6 1575 aa18.2■□□□□ 0.5
SRP68-203ENST00000542536 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
SRP68-203ENST00000542536 CUX2O14529 1486 aa18.18■□□□□ 0.5
SRP68-203ENST00000542536 IGF1RP08069 1367 aa18.18■□□□□ 0.5
SRP68-203ENST00000542536 NESP48681 1621 aa18.14■□□□□ 0.49
SRP68-203ENST00000542536 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
SRP68-203ENST00000542536 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
SRP68-203ENST00000542536 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
SRP68-203ENST00000542536 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
SRP68-203ENST00000542536 CARMIL1Q5VZK9 1371 aa18.07■□□□□ 0.48
SRP68-203ENST00000542536 PDS5BQ9NTI5 1447 aa18.04■□□□□ 0.48
SRP68-203ENST00000542536 APLP2Q06481 763 aa18.03■□□□□ 0.48
SRP68-203ENST00000542536 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
SRP68-203ENST00000542536 URB2Q14146 1524 aaKnown RBP18.02■□□□□ 0.48
SRP68-203ENST00000542536 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
SRP68-203ENST00000542536 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
SRP68-203ENST00000542536 RANGAP1P46060 587 aaPredicted RBP17.98■□□□□ 0.47
SRP68-203ENST00000542536 DNAJC5BQ9UF47 199 aa17.98■□□□□ 0.47
SRP68-203ENST00000542536 WDR97A6NE52 1622 aa17.97■□□□□ 0.47
SRP68-203ENST00000542536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.96■□□□□ 0.47
SRP68-203ENST00000542536 CUL7Q14999 1698 aa17.95■□□□□ 0.46
SRP68-203ENST00000542536 CCER1Q8TC90 406 aaPredicted RBP17.94■□□□□ 0.46
SRP68-203ENST00000542536 KIF21AQ7Z4S6 1674 aa17.9■□□□□ 0.46
SRP68-203ENST00000542536 MAP3K1Q13233 1512 aa17.89■□□□□ 0.45
SRP68-203ENST00000542536 ABCA5Q8WWZ7 1642 aa17.89■□□□□ 0.45
SRP68-203ENST00000542536 KANK4Q5T7N3 995 aaPredicted RBP17.84■□□□□ 0.45
SRP68-203ENST00000542536 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.44
SRP68-203ENST00000542536 EFCAB5A4FU69 1503 aa17.82■□□□□ 0.44
SRP68-203ENST00000542536 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
SRP68-203ENST00000542536 RRBP1Q9P2E9 1410 aaKnown RBP17.82■□□□□ 0.44
SRP68-203ENST00000542536 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
SRP68-203ENST00000542536 CTTNBP2Q8WZ74 1663 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms