RNA–Protein interactions for RNA: ENST00000542443.5

TRDN-204, Transcript of triadin, humanhuman

TSL 1 (best) BASIC

Gene TRDN, Length 1,294 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRDN-204ENST00000542443 AEBP2Q6ZN18 517 aaPredicted RBP29.06■■■□□ 2.24
TRDN-204ENST00000542443 CHIC1Q5VXU3 224 aa27.86■■■□□ 2.05
TRDN-204ENST00000542443 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
TRDN-204ENST00000542443 PHF23Q9BUL5 403 aaPredicted RBP24.48■■□□□ 1.51
TRDN-204ENST00000542443 FOXD1Q16676 465 aa23.03■■□□□ 1.28
TRDN-204ENST00000542443 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
TRDN-204ENST00000542443 PPP6R1Q9UPN7 881 aa21.77■■□□□ 1.08
TRDN-204ENST00000542443 ADRA2BP18089 450 aa21.75■■□□□ 1.07
TRDN-204ENST00000542443 PIAS4Q8N2W9 510 aaPredicted RBP21.63■■□□□ 1.05
TRDN-204ENST00000542443 MSH5O43196 834 aa21.43■■□□□ 1.02
TRDN-204ENST00000542443 POTEDQ86YR6 584 aa20.45■□□□□ 0.86
TRDN-204ENST00000542443 MAPK8IP2Q13387 824 aaPredicted RBP19.89■□□□□ 0.77
TRDN-204ENST00000542443 SCAF1Q9H7N4 1312 aaKnown RBP19.87■□□□□ 0.77
TRDN-204ENST00000542443 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
TRDN-204ENST00000542443 DMRT2Q9Y5R5 561 aa19.65■□□□□ 0.74
TRDN-204ENST00000542443 CNKSR2Q8WXI2 1034 aa19.24■□□□□ 0.67
TRDN-204ENST00000542443 NCBP3Q53F19 620 aaKnown RBP19.03■□□□□ 0.64
TRDN-204ENST00000542443 HOXD11P31277 338 aaPredicted RBP19.02■□□□□ 0.64
TRDN-204ENST00000542443 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
TRDN-204ENST00000542443 DCAF8L1A6NGE4 600 aa18.96■□□□□ 0.63
TRDN-204ENST00000542443 NPM3O75607 178 aaKnown RBP18.74■□□□□ 0.59
TRDN-204ENST00000542443 KCNA4P22459 653 aa18.66■□□□□ 0.58
TRDN-204ENST00000542443 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
TRDN-204ENST00000542443 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
TRDN-204ENST00000542443 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
TRDN-204ENST00000542443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
TRDN-204ENST00000542443 C1QBPQ07021 282 aaKnown RBP18.06■□□□□ 0.48
TRDN-204ENST00000542443 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
TRDN-204ENST00000542443 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
TRDN-204ENST00000542443 SLC4A1APQ9BWU0 796 aaKnown RBP17.69■□□□□ 0.42
TRDN-204ENST00000542443 SPINK5Q9NQ38 1064 aaPredicted RBP17.5■□□□□ 0.39
TRDN-204ENST00000542443 CAPN15O75808 1086 aa17.49■□□□□ 0.39
TRDN-204ENST00000542443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.41■□□□□ 0.38
TRDN-204ENST00000542443 HNRNPUL2Q1KMD3 747 aaKnown RBP17.41■□□□□ 0.38
TRDN-204ENST00000542443 APLP2Q06481 763 aa17.35■□□□□ 0.37
TRDN-204ENST00000542443 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.36
TRDN-204ENST00000542443 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
TRDN-204ENST00000542443 FOXD4L1Q9NU39 408 aa17.31■□□□□ 0.36
TRDN-204ENST00000542443 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
TRDN-204ENST00000542443 DSG3P32926 999 aa17.26■□□□□ 0.35
TRDN-204ENST00000542443 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
TRDN-204ENST00000542443 ZBTB22O15209 634 aa17.14■□□□□ 0.33
TRDN-204ENST00000542443 ABCB7O75027 752 aa17.11■□□□□ 0.33
TRDN-204ENST00000542443 ATF5Q9Y2D1 282 aaPredicted RBP16.91■□□□□ 0.3
TRDN-204ENST00000542443 POLA2Q14181 598 aa16.86■□□□□ 0.29
TRDN-204ENST00000542443 ATXN8OSP0DMR3 200 aa16.7■□□□□ 0.26
TRDN-204ENST00000542443 EHMT2Q96KQ7 1210 aa16.63■□□□□ 0.25
TRDN-204ENST00000542443 CSRNP3Q8WYN3 585 aa16.62■□□□□ 0.25
TRDN-204ENST00000542443 ZBTB12Q9Y330 459 aaPredicted RBP16.5■□□□□ 0.23
TRDN-204ENST00000542443 RBM42Q9BTD8 480 aaKnown RBP16.46■□□□□ 0.23
TRDN-204ENST00000542443 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
TRDN-204ENST00000542443 FBLN2P98095 1184 aa16.25■□□□□ 0.19
TRDN-204ENST00000542443 MKRN4PQ13434 485 aaPredicted RBP16.14■□□□□ 0.17
TRDN-204ENST00000542443 AKT1S1Q96B36 256 aa16.14■□□□□ 0.17
TRDN-204ENST00000542443 POTEHQ6S545 545 aa16.09■□□□□ 0.17
TRDN-204ENST00000542443 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
TRDN-204ENST00000542443 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
TRDN-204ENST00000542443 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
TRDN-204ENST00000542443 CHRDL2Q6WN34 429 aa16.01■□□□□ 0.15
TRDN-204ENST00000542443 REM2Q8IYK8 340 aaPredicted RBP16.01■□□□□ 0.15
TRDN-204ENST00000542443 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
TRDN-204ENST00000542443 PITPNM1O00562 1244 aa15.83■□□□□ 0.12
TRDN-204ENST00000542443 SSUH2Q9Y2M2 353 aa15.81■□□□□ 0.12
TRDN-204ENST00000542443 CLEC11AQ9Y240 323 aa15.71■□□□□ 0.11
TRDN-204ENST00000542443 PABPN1Q86U42 306 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRDN-204ENST00000542443 PIP4P2Q8N4L2 257 aa15.69■□□□□ 0.1
TRDN-204ENST00000542443 SPDYE1Q8NFV5 336 aaPredicted RBP15.68■□□□□ 0.1
TRDN-204ENST00000542443 FXR2P51116 673 aaKnown RBP eCLIP15.61■□□□□ 0.09
TRDN-204ENST00000542443 SPDYE4A6NLX3 237 aa15.56■□□□□ 0.08
TRDN-204ENST00000542443 PRR29P0C7W0 189 aa15.46■□□□□ 0.07
TRDN-204ENST00000542443 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
TRDN-204ENST00000542443 HAX1O00165 279 aa15.37■□□□□ 0.05
TRDN-204ENST00000542443 CHADLQ6NUI6 762 aa15.36■□□□□ 0.05
TRDN-204ENST00000542443 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
TRDN-204ENST00000542443 SP7Q8TDD2 431 aaPredicted RBP15.22■□□□□ 0.03
TRDN-204ENST00000542443 EVX2Q03828 476 aa15.17■□□□□ 0.02
TRDN-204ENST00000542443 PROM2Q8N271 834 aa15.13■□□□□ 0.01
TRDN-204ENST00000542443 FARP1Q9Y4F1 1045 aaPredicted RBP15.13■□□□□ 0.01
TRDN-204ENST00000542443 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
TRDN-204ENST00000542443 FKBP8Q14318 412 aa15.1■□□□□ 0.01
TRDN-204ENST00000542443 CREBZFQ9NS37 354 aa15.1■□□□□ 0.01
TRDN-204ENST00000542443 CD44P16070 742 aaKnown RBP14.98□□□□□ -0.01
TRDN-204ENST00000542443 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
TRDN-204ENST00000542443 MNX1P50219 401 aaPredicted RBP14.85□□□□□ -0.03
TRDN-204ENST00000542443 GABBR2O75899 941 aa14.84□□□□□ -0.03
TRDN-204ENST00000542443 MIER1Q8N108 512 aa14.84□□□□□ -0.03
TRDN-204ENST00000542443 ZRANB1Q9UGI0 708 aa14.83□□□□□ -0.04
TRDN-204ENST00000542443 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
TRDN-204ENST00000542443 PAK3O75914 559 aaPredicted RBP14.76□□□□□ -0.05
TRDN-204ENST00000542443 PLCD3Q8N3E9 789 aa14.76□□□□□ -0.05
TRDN-204ENST00000542443 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
TRDN-204ENST00000542443 FBXO3Q9UK99 471 aa14.66□□□□□ -0.06
TRDN-204ENST00000542443 TSPYL2Q9H2G4 693 aaPredicted RBP14.65□□□□□ -0.06
TRDN-204ENST00000542443 CLCN6P51797 869 aa14.64□□□□□ -0.07
TRDN-204ENST00000542443 PHF12Q96QT6 1004 aa14.64□□□□□ -0.07
TRDN-204ENST00000542443 ZBTB47Q9UFB7 747 aaPredicted RBP14.58□□□□□ -0.08
TRDN-204ENST00000542443 GALR2O43603 387 aaPredicted RBP14.55□□□□□ -0.08
TRDN-204ENST00000542443 RASEFQ8IZ41 740 aa14.54□□□□□ -0.08
TRDN-204ENST00000542443 DCBLD2Q96PD2 775 aa14.53□□□□□ -0.08
TRDN-204ENST00000542443 POTEIP0CG38 1075 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms