RNA–Protein interactions for RNA: ENST00000542187.1

PPFIBP1-214, Transcript of PPFIA binding protein 1, humanhuman

TSL 3

Gene PPFIBP1, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-214ENST00000542187 NISCHQ9Y2I1 1504 aa14.29□□□□□ -0.12
PPFIBP1-214ENST00000542187 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
PPFIBP1-214ENST00000542187 ZCCHC6Q5VYS8 1495 aaKnown RBP12.05□□□□□ -0.48
PPFIBP1-214ENST00000542187 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
PPFIBP1-214ENST00000542187 SHROOM4Q9ULL8 1493 aa11.69□□□□□ -0.54
PPFIBP1-214ENST00000542187 MYO15BQ96JP2 1530 aa11.64□□□□□ -0.55
PPFIBP1-214ENST00000542187 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
PPFIBP1-214ENST00000542187 ABCC9O60706 1549 aa11.55□□□□□ -0.56
PPFIBP1-214ENST00000542187 NACADO15069 1562 aa11.53□□□□□ -0.56
PPFIBP1-214ENST00000542187 SCRIBQ14160 1630 aa11.44□□□□□ -0.58
PPFIBP1-214ENST00000542187 RB1CC1Q8TDY2 1594 aa11.4□□□□□ -0.58
PPFIBP1-214ENST00000542187 SUPT5HO00267 1087 aaKnown RBP11.28□□□□□ -0.6
PPFIBP1-214ENST00000542187 UNC13AQ9UPW8 1703 aa11.28□□□□□ -0.6
PPFIBP1-214ENST00000542187 RSF1Q96T23 1441 aaPredicted RBP11.1□□□□□ -0.63
PPFIBP1-214ENST00000542187 BICRAQ9NZM4 1560 aa11.06□□□□□ -0.64
PPFIBP1-214ENST00000542187 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
PPFIBP1-214ENST00000542187 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
PPFIBP1-214ENST00000542187 BAZ1AQ9NRL2 1556 aaPredicted RBP11.03□□□□□ -0.64
PPFIBP1-214ENST00000542187 SMARCA4P51532 1647 aa10.99□□□□□ -0.65
PPFIBP1-214ENST00000542187 WIZO95785 1651 aa10.99□□□□□ -0.65
PPFIBP1-214ENST00000542187 CHIC1Q5VXU3 224 aa10.91□□□□□ -0.66
PPFIBP1-214ENST00000542187 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
PPFIBP1-214ENST00000542187 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
PPFIBP1-214ENST00000542187 PEG3Q9GZU2 1588 aa10.85□□□□□ -0.67
PPFIBP1-214ENST00000542187 EIF4G1Q04637 1599 aaKnown RBP10.79□□□□□ -0.68
PPFIBP1-214ENST00000542187 SMARCA2P51531 1590 aa10.77□□□□□ -0.68
PPFIBP1-214ENST00000542187 CCDC88BA6NC98 1476 aa10.72□□□□□ -0.69
PPFIBP1-214ENST00000542187 ATAD2BQ9ULI0 1458 aa10.72□□□□□ -0.69
PPFIBP1-214ENST00000542187 BAZ1BQ9UIG0 1483 aaKnown RBP10.68□□□□□ -0.7
PPFIBP1-214ENST00000542187 HMGXB3Q12766 1538 aa10.65□□□□□ -0.7
PPFIBP1-214ENST00000542187 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
PPFIBP1-214ENST00000542187 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
PPFIBP1-214ENST00000542187 ABCC8Q09428 1581 aa10.56□□□□□ -0.72
PPFIBP1-214ENST00000542187 PRDM2Q13029 1718 aa10.53□□□□□ -0.72
PPFIBP1-214ENST00000542187 CC2D2AQ9P2K1 1620 aa10.51□□□□□ -0.73
PPFIBP1-214ENST00000542187 LOC105371045A0A1W2PR82 267 aa10.46□□□□□ -0.73
PPFIBP1-214ENST00000542187 SYNJ1O43426 1573 aa10.45□□□□□ -0.74
PPFIBP1-214ENST00000542187 WRNQ14191 1432 aaPredicted RBP eCLIP10.45□□□□□ -0.74
PPFIBP1-214ENST00000542187 BIVM-ERCC5R4GMW8 1640 aa10.43□□□□□ -0.74
PPFIBP1-214ENST00000542187 TOP2BQ02880 1626 aa10.41□□□□□ -0.74
PPFIBP1-214ENST00000542187 CFTRP13569 1480 aa10.41□□□□□ -0.74
PPFIBP1-214ENST00000542187 EEA1Q15075 1411 aa10.41□□□□□ -0.74
PPFIBP1-214ENST00000542187 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.74
PPFIBP1-214ENST00000542187 SOGA1O94964 1423 aa10.35□□□□□ -0.75
PPFIBP1-214ENST00000542187 CUX1P39880 1505 aa10.33□□□□□ -0.76
PPFIBP1-214ENST00000542187 CADPSQ9ULU8 1353 aa10.31□□□□□ -0.76
PPFIBP1-214ENST00000542187 KIF21BO75037 1637 aa10.31□□□□□ -0.76
PPFIBP1-214ENST00000542187 RUSC2Q8N2Y8 1516 aa10.31□□□□□ -0.76
PPFIBP1-214ENST00000542187 GOLGA3Q08378 1498 aa10.27□□□□□ -0.77
PPFIBP1-214ENST00000542187 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
PPFIBP1-214ENST00000542187 LAMC3Q9Y6N6 1575 aa10.26□□□□□ -0.77
PPFIBP1-214ENST00000542187 CEP164Q9UPV0 1460 aa10.25□□□□□ -0.77
PPFIBP1-214ENST00000542187 TNIKQ9UKE5 1360 aa10.24□□□□□ -0.77
PPFIBP1-214ENST00000542187 EHMT2Q96KQ7 1210 aa10.23□□□□□ -0.77
PPFIBP1-214ENST00000542187 FANCD2Q9BXW9 1451 aa10.23□□□□□ -0.77
PPFIBP1-214ENST00000542187 CEP162Q5TB80 1403 aa10.21□□□□□ -0.78
PPFIBP1-214ENST00000542187 DNMBPQ6XZF7 1577 aa10.21□□□□□ -0.78
PPFIBP1-214ENST00000542187 NESP48681 1621 aa10.2□□□□□ -0.78
PPFIBP1-214ENST00000542187 ERICH3Q5RHP9 1530 aa10.2□□□□□ -0.78
PPFIBP1-214ENST00000542187 FGD5Q6ZNL6 1462 aa10.17□□□□□ -0.78
PPFIBP1-214ENST00000542187 KIF27Q86VH2 1401 aa10.17□□□□□ -0.78
PPFIBP1-214ENST00000542187 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
PPFIBP1-214ENST00000542187 PRXQ9BXM0 1461 aa10.16□□□□□ -0.78
PPFIBP1-214ENST00000542187 RAPGEF2Q9Y4G8 1499 aa10.16□□□□□ -0.78
PPFIBP1-214ENST00000542187 TOPBP1Q92547 1522 aa10.15□□□□□ -0.78
PPFIBP1-214ENST00000542187 WDR97A6NE52 1622 aa10.14□□□□□ -0.79
PPFIBP1-214ENST00000542187 UBTFP17480 764 aaKnown RBP10.13□□□□□ -0.79
PPFIBP1-214ENST00000542187 PCGF6Q9BYE7 350 aa10.13□□□□□ -0.79
PPFIBP1-214ENST00000542187 CUX2O14529 1486 aa10.12□□□□□ -0.79
PPFIBP1-214ENST00000542187 TRIM26Q12899 539 aaPredicted RBP10.12□□□□□ -0.79
PPFIBP1-214ENST00000542187 PDS5BQ9NTI5 1447 aa10.12□□□□□ -0.79
PPFIBP1-214ENST00000542187 URB2Q14146 1524 aaKnown RBP10.11□□□□□ -0.79
PPFIBP1-214ENST00000542187 POLA1P09884 1462 aaPredicted RBP10.1□□□□□ -0.79
PPFIBP1-214ENST00000542187 ABCA10Q8WWZ4 1543 aa10.1□□□□□ -0.79
PPFIBP1-214ENST00000542187 DNAJC5BQ9UF47 199 aa10.09□□□□□ -0.79
PPFIBP1-214ENST00000542187 CLIP1P30622 1438 aa10.08□□□□□ -0.8
PPFIBP1-214ENST00000542187 CUL7Q14999 1698 aa10.06□□□□□ -0.8
PPFIBP1-214ENST00000542187 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
PPFIBP1-214ENST00000542187 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
PPFIBP1-214ENST00000542187 IGF1RP08069 1367 aa10.04□□□□□ -0.8
PPFIBP1-214ENST00000542187 VPS8Q8N3P4 1428 aa10.03□□□□□ -0.8
PPFIBP1-214ENST00000542187 TARBP1Q13395 1621 aaKnown RBP10.02□□□□□ -0.81
PPFIBP1-214ENST00000542187 MRC2Q9UBG0 1479 aa10.02□□□□□ -0.81
PPFIBP1-214ENST00000542187 CTTNBP2Q8WZ74 1663 aa10.01□□□□□ -0.81
PPFIBP1-214ENST00000542187 CARMIL1Q5VZK9 1371 aa10.01□□□□□ -0.81
PPFIBP1-214ENST00000542187 HRCP23327 699 aa10□□□□□ -0.81
PPFIBP1-214ENST00000542187 PBRM1Q86U86 1689 aa9.99□□□□□ -0.81
PPFIBP1-214ENST00000542187 ARAP1Q96P48 1450 aa9.99□□□□□ -0.81
PPFIBP1-214ENST00000542187 WDR62O43379 1518 aa9.97□□□□□ -0.81
PPFIBP1-214ENST00000542187 GAPVD1Q14C86 1478 aa9.96□□□□□ -0.82
PPFIBP1-214ENST00000542187 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
PPFIBP1-214ENST00000542187 ARHGAP35Q9NRY4 1499 aa9.95□□□□□ -0.82
PPFIBP1-214ENST00000542187 THOC2Q8NI27 1593 aaKnown RBP9.94□□□□□ -0.82
PPFIBP1-214ENST00000542187 AEBP2Q6ZN18 517 aaPredicted RBP9.94□□□□□ -0.82
PPFIBP1-214ENST00000542187 TDRD9Q8NDG6 1382 aaKnown RBP9.91□□□□□ -0.82
PPFIBP1-214ENST00000542187 ADAMTS12P58397 1594 aa9.91□□□□□ -0.82
PPFIBP1-214ENST00000542187 EFCAB5A4FU69 1503 aa9.91□□□□□ -0.82
PPFIBP1-214ENST00000542187 IFT140Q96RY7 1462 aa9.91□□□□□ -0.82
PPFIBP1-214ENST00000542187 RANGAP1P46060 587 aaPredicted RBP9.9□□□□□ -0.82
PPFIBP1-214ENST00000542187 ERCC6Q03468 1493 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms