RNA–Protein interactions for RNA: ENST00000541421.2

SMLR1-201, Transcript of small leucine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMLR1, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMLR1-201ENST00000541421 NISCHQ9Y2I1 1504 aa21.76■■□□□ 1.07
SMLR1-201ENST00000541421 CCDC180Q9P1Z9 1646 aa18.76■□□□□ 0.59
SMLR1-201ENST00000541421 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
SMLR1-201ENST00000541421 SHROOM4Q9ULL8 1493 aa18.35■□□□□ 0.53
SMLR1-201ENST00000541421 ABCC9O60706 1549 aa18.03■□□□□ 0.48
SMLR1-201ENST00000541421 SUPT5HO00267 1087 aaKnown RBP17.98■□□□□ 0.47
SMLR1-201ENST00000541421 DCAF1Q9Y4B6 1507 aa17.93■□□□□ 0.46
SMLR1-201ENST00000541421 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
SMLR1-201ENST00000541421 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
SMLR1-201ENST00000541421 NACADO15069 1562 aa17.57■□□□□ 0.4
SMLR1-201ENST00000541421 CHIC1Q5VXU3 224 aa17.51■□□□□ 0.39
SMLR1-201ENST00000541421 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
SMLR1-201ENST00000541421 SCRIBQ14160 1630 aa17.3■□□□□ 0.36
SMLR1-201ENST00000541421 RSF1Q96T23 1441 aaPredicted RBP17.16■□□□□ 0.34
SMLR1-201ENST00000541421 UNC13AQ9UPW8 1703 aa17.12■□□□□ 0.33
SMLR1-201ENST00000541421 BICRAQ9NZM4 1560 aa17■□□□□ 0.31
SMLR1-201ENST00000541421 PABPN1Q86U42 306 aaKnown RBP eCLIP16.96■□□□□ 0.3
SMLR1-201ENST00000541421 LOC105371045A0A1W2PR82 267 aa16.91■□□□□ 0.3
SMLR1-201ENST00000541421 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
SMLR1-201ENST00000541421 MROH2BQ7Z745 1585 aa16.87■□□□□ 0.29
SMLR1-201ENST00000541421 HRCP23327 699 aa16.86■□□□□ 0.29
SMLR1-201ENST00000541421 PCGF6Q9BYE7 350 aa16.84■□□□□ 0.29
SMLR1-201ENST00000541421 TRIM41Q8WV44 630 aa16.81■□□□□ 0.28
SMLR1-201ENST00000541421 WIZO95785 1651 aa16.77■□□□□ 0.28
SMLR1-201ENST00000541421 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
SMLR1-201ENST00000541421 TRIM26Q12899 539 aaPredicted RBP16.62■□□□□ 0.25
SMLR1-201ENST00000541421 FAM9AQ8IZU1 332 aaPredicted RBP16.58■□□□□ 0.25
SMLR1-201ENST00000541421 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
SMLR1-201ENST00000541421 EIF4G1Q04637 1599 aaKnown RBP16.57■□□□□ 0.24
SMLR1-201ENST00000541421 TOP2AP11388 1531 aaKnown RBP16.57■□□□□ 0.24
SMLR1-201ENST00000541421 CCDC88BA6NC98 1476 aa16.45■□□□□ 0.22
SMLR1-201ENST00000541421 SMARCA2P51531 1590 aa16.45■□□□□ 0.22
SMLR1-201ENST00000541421 PPARGC1BQ86YN6 1023 aaKnown RBP16.41■□□□□ 0.22
SMLR1-201ENST00000541421 EHMT2Q96KQ7 1210 aa16.38■□□□□ 0.21
SMLR1-201ENST00000541421 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
SMLR1-201ENST00000541421 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
SMLR1-201ENST00000541421 ATAD2BQ9ULI0 1458 aa16.32■□□□□ 0.2
SMLR1-201ENST00000541421 CC2D2AQ9P2K1 1620 aa16.32■□□□□ 0.2
SMLR1-201ENST00000541421 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.2
SMLR1-201ENST00000541421 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
SMLR1-201ENST00000541421 NCAPD3P42695 1498 aa16.25■□□□□ 0.19
SMLR1-201ENST00000541421 EEA1Q15075 1411 aa16.22■□□□□ 0.19
SMLR1-201ENST00000541421 SOGA1O94964 1423 aa16.18■□□□□ 0.18
SMLR1-201ENST00000541421 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
SMLR1-201ENST00000541421 HMGXB3Q12766 1538 aa16.17■□□□□ 0.18
SMLR1-201ENST00000541421 WRNQ14191 1432 aaPredicted RBP eCLIP16.14■□□□□ 0.17
SMLR1-201ENST00000541421 TNIKQ9UKE5 1360 aa16.13■□□□□ 0.17
SMLR1-201ENST00000541421 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
SMLR1-201ENST00000541421 CEP162Q5TB80 1403 aa16.12■□□□□ 0.17
SMLR1-201ENST00000541421 RUSC2Q8N2Y8 1516 aa16.09■□□□□ 0.17
SMLR1-201ENST00000541421 GOLGA3Q08378 1498 aa16.05■□□□□ 0.16
SMLR1-201ENST00000541421 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
SMLR1-201ENST00000541421 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
SMLR1-201ENST00000541421 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
SMLR1-201ENST00000541421 KIF21BO75037 1637 aa15.97■□□□□ 0.15
SMLR1-201ENST00000541421 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
SMLR1-201ENST00000541421 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
SMLR1-201ENST00000541421 CCER1Q8TC90 406 aaPredicted RBP15.89■□□□□ 0.13
SMLR1-201ENST00000541421 TTBK1Q5TCY1 1321 aaPredicted RBP15.85■□□□□ 0.13
SMLR1-201ENST00000541421 BIVM-ERCC5R4GMW8 1640 aa15.85■□□□□ 0.13
SMLR1-201ENST00000541421 CLIP1P30622 1438 aa15.84■□□□□ 0.13
SMLR1-201ENST00000541421 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
SMLR1-201ENST00000541421 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
SMLR1-201ENST00000541421 CFTRP13569 1480 aa15.8■□□□□ 0.12
SMLR1-201ENST00000541421 VPS8Q8N3P4 1428 aa15.78■□□□□ 0.12
SMLR1-201ENST00000541421 NESP48681 1621 aa15.75■□□□□ 0.11
SMLR1-201ENST00000541421 ERICH3Q5RHP9 1530 aa15.73■□□□□ 0.11
SMLR1-201ENST00000541421 CUX1P39880 1505 aa15.72■□□□□ 0.11
SMLR1-201ENST00000541421 PRXQ9BXM0 1461 aa15.71■□□□□ 0.11
SMLR1-201ENST00000541421 LAMC3Q9Y6N6 1575 aa15.71■□□□□ 0.11
SMLR1-201ENST00000541421 APLP2Q06481 763 aa15.67■□□□□ 0.1
SMLR1-201ENST00000541421 KIF27Q86VH2 1401 aa15.66■□□□□ 0.1
SMLR1-201ENST00000541421 PRDM2Q13029 1718 aa15.63■□□□□ 0.09
SMLR1-201ENST00000541421 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
SMLR1-201ENST00000541421 PDS5BQ9NTI5 1447 aa15.6■□□□□ 0.09
SMLR1-201ENST00000541421 FANCD2Q9BXW9 1451 aa15.6■□□□□ 0.09
SMLR1-201ENST00000541421 ARAP1Q96P48 1450 aa15.59■□□□□ 0.09
SMLR1-201ENST00000541421 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.08
SMLR1-201ENST00000541421 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
SMLR1-201ENST00000541421 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
SMLR1-201ENST00000541421 CUX2O14529 1486 aa15.49■□□□□ 0.07
SMLR1-201ENST00000541421 IGF1RP08069 1367 aa15.47■□□□□ 0.07
SMLR1-201ENST00000541421 ZNF316A6NFI3 1004 aaPredicted RBP15.47■□□□□ 0.07
SMLR1-201ENST00000541421 ERCC6Q03468 1493 aa15.46■□□□□ 0.07
SMLR1-201ENST00000541421 ARHGAP35Q9NRY4 1499 aa15.46■□□□□ 0.07
SMLR1-201ENST00000541421 FGD5Q6ZNL6 1462 aa15.45■□□□□ 0.06
SMLR1-201ENST00000541421 KANK4Q5T7N3 995 aaPredicted RBP15.44■□□□□ 0.06
SMLR1-201ENST00000541421 URB2Q14146 1524 aaKnown RBP15.43■□□□□ 0.06
SMLR1-201ENST00000541421 SCAF1Q9H7N4 1312 aaKnown RBP15.43■□□□□ 0.06
SMLR1-201ENST00000541421 MRC2Q9UBG0 1479 aa15.41■□□□□ 0.06
SMLR1-201ENST00000541421 RRBP1Q9P2E9 1410 aaKnown RBP15.41■□□□□ 0.06
SMLR1-201ENST00000541421 CARMIL1Q5VZK9 1371 aa15.4■□□□□ 0.06
SMLR1-201ENST00000541421 TOPBP1Q92547 1522 aa15.4■□□□□ 0.06
SMLR1-201ENST00000541421 DNMBPQ6XZF7 1577 aa15.39■□□□□ 0.05
SMLR1-201ENST00000541421 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
SMLR1-201ENST00000541421 THOC2Q8NI27 1593 aaKnown RBP15.38■□□□□ 0.05
SMLR1-201ENST00000541421 ACIN1Q9UKV3 1341 aaKnown RBP15.36■□□□□ 0.05
SMLR1-201ENST00000541421 WDR62O43379 1518 aa15.36■□□□□ 0.05
SMLR1-201ENST00000541421 MAP3K1Q13233 1512 aa15.35■□□□□ 0.05
SMLR1-201ENST00000541421 DHX57Q6P158 1386 aaKnown RBP15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms