RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-210ENST00000541157 AEBP2Q6ZN18 517 aaPredicted RBP27.43■■□□□ 1.98
MRE11-210ENST00000541157 CHIC1Q5VXU3 224 aa26.68■■□□□ 1.86
MRE11-210ENST00000541157 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
MRE11-210ENST00000541157 SENP3Q9H4L4 574 aaPredicted RBP23.29■■□□□ 1.32
MRE11-210ENST00000541157 NISCHQ9Y2I1 1504 aa23.06■■□□□ 1.28
MRE11-210ENST00000541157 FOXD1Q16676 465 aa21.63■■□□□ 1.05
MRE11-210ENST00000541157 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
MRE11-210ENST00000541157 PPP6R1Q9UPN7 881 aa20.74■□□□□ 0.91
MRE11-210ENST00000541157 ADRA2BP18089 450 aa20.72■□□□□ 0.91
MRE11-210ENST00000541157 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
MRE11-210ENST00000541157 CCDC180Q9P1Z9 1646 aa20.22■□□□□ 0.83
MRE11-210ENST00000541157 MSH5O43196 834 aa19.98■□□□□ 0.79
MRE11-210ENST00000541157 ZCCHC6Q5VYS8 1495 aaKnown RBP19.36■□□□□ 0.69
MRE11-210ENST00000541157 ABCC9O60706 1549 aa19.15■□□□□ 0.66
MRE11-210ENST00000541157 DCAF1Q9Y4B6 1507 aa19.11■□□□□ 0.65
MRE11-210ENST00000541157 PPP4R3CPQ6ZMV5 832 aa19.05■□□□□ 0.64
MRE11-210ENST00000541157 MYO15BQ96JP2 1530 aa18.95■□□□□ 0.62
MRE11-210ENST00000541157 DCAF8L2P0C7V8 631 aa18.94■□□□□ 0.62
MRE11-210ENST00000541157 SCAF1Q9H7N4 1312 aaKnown RBP18.94■□□□□ 0.62
MRE11-210ENST00000541157 NACADO15069 1562 aa18.84■□□□□ 0.61
MRE11-210ENST00000541157 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
MRE11-210ENST00000541157 RB1CC1Q8TDY2 1594 aa18.7■□□□□ 0.58
MRE11-210ENST00000541157 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
MRE11-210ENST00000541157 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
MRE11-210ENST00000541157 CNKSR2Q8WXI2 1034 aa18.52■□□□□ 0.56
MRE11-210ENST00000541157 NCBP3Q53F19 620 aaKnown RBP18.51■□□□□ 0.55
MRE11-210ENST00000541157 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
MRE11-210ENST00000541157 KCNA4P22459 653 aa18.5■□□□□ 0.55
MRE11-210ENST00000541157 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
MRE11-210ENST00000541157 UNC13AQ9UPW8 1703 aa18.28■□□□□ 0.52
MRE11-210ENST00000541157 NPM3O75607 178 aaKnown RBP18.25■□□□□ 0.51
MRE11-210ENST00000541157 RNF216Q9NWF9 866 aaPredicted RBP18.18■□□□□ 0.5
MRE11-210ENST00000541157 BICRAQ9NZM4 1560 aa18.13■□□□□ 0.49
MRE11-210ENST00000541157 HOXD11P31277 338 aaPredicted RBP18.13■□□□□ 0.49
MRE11-210ENST00000541157 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
MRE11-210ENST00000541157 CECR2Q9BXF3 1484 aa17.89■□□□□ 0.45
MRE11-210ENST00000541157 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
MRE11-210ENST00000541157 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
MRE11-210ENST00000541157 BAZ1AQ9NRL2 1556 aaPredicted RBP17.83■□□□□ 0.44
MRE11-210ENST00000541157 RSF1Q96T23 1441 aaPredicted RBP17.81■□□□□ 0.44
MRE11-210ENST00000541157 MROH2BQ7Z745 1585 aa17.79■□□□□ 0.44
MRE11-210ENST00000541157 SMARCA4P51532 1647 aa17.76■□□□□ 0.43
MRE11-210ENST00000541157 DNAJC5BQ9UF47 199 aa17.67■□□□□ 0.42
MRE11-210ENST00000541157 WIZO95785 1651 aa17.62■□□□□ 0.41
MRE11-210ENST00000541157 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
MRE11-210ENST00000541157 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
MRE11-210ENST00000541157 PEG3Q9GZU2 1588 aa17.57■□□□□ 0.4
MRE11-210ENST00000541157 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
MRE11-210ENST00000541157 TOP2AP11388 1531 aaKnown RBP17.49■□□□□ 0.39
MRE11-210ENST00000541157 ATAD2BQ9ULI0 1458 aa17.48■□□□□ 0.39
MRE11-210ENST00000541157 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
MRE11-210ENST00000541157 NCAPD3P42695 1498 aa17.37■□□□□ 0.37
MRE11-210ENST00000541157 HMGXB3Q12766 1538 aa17.37■□□□□ 0.37
MRE11-210ENST00000541157 CC2D2AQ9P2K1 1620 aa17.35■□□□□ 0.37
MRE11-210ENST00000541157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.32■□□□□ 0.36
MRE11-210ENST00000541157 CCDC88BA6NC98 1476 aa17.26■□□□□ 0.35
MRE11-210ENST00000541157 SLC4A2P04920 1241 aa17.25■□□□□ 0.35
MRE11-210ENST00000541157 RNF39Q9H2S5 420 aa17.11■□□□□ 0.33
MRE11-210ENST00000541157 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
MRE11-210ENST00000541157 ZBTB22O15209 634 aa17.02■□□□□ 0.32
MRE11-210ENST00000541157 EHMT2Q96KQ7 1210 aa17.02■□□□□ 0.32
MRE11-210ENST00000541157 U3KPZ7 1027 aaPredicted RBP17.02■□□□□ 0.32
MRE11-210ENST00000541157 CFTRP13569 1480 aa16.94■□□□□ 0.3
MRE11-210ENST00000541157 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.3
MRE11-210ENST00000541157 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
MRE11-210ENST00000541157 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
MRE11-210ENST00000541157 PRDM2Q13029 1718 aa16.86■□□□□ 0.29
MRE11-210ENST00000541157 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
MRE11-210ENST00000541157 CSRNP3Q8WYN3 585 aa16.83■□□□□ 0.28
MRE11-210ENST00000541157 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
MRE11-210ENST00000541157 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
MRE11-210ENST00000541157 WRNQ14191 1432 aaPredicted RBP eCLIP16.78■□□□□ 0.28
MRE11-210ENST00000541157 NESP48681 1621 aa16.77■□□□□ 0.27
MRE11-210ENST00000541157 CACNB1Q02641 598 aaPredicted RBP16.76■□□□□ 0.27
MRE11-210ENST00000541157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.75■□□□□ 0.27
MRE11-210ENST00000541157 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
MRE11-210ENST00000541157 SYNJ1O43426 1573 aa16.72■□□□□ 0.27
MRE11-210ENST00000541157 FANCD2Q9BXW9 1451 aa16.71■□□□□ 0.27
MRE11-210ENST00000541157 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
MRE11-210ENST00000541157 TOP2BQ02880 1626 aa16.68■□□□□ 0.26
MRE11-210ENST00000541157 BIVM-ERCC5R4GMW8 1640 aa16.67■□□□□ 0.26
MRE11-210ENST00000541157 PDS5BQ9NTI5 1447 aa16.66■□□□□ 0.26
MRE11-210ENST00000541157 CUX1P39880 1505 aa16.65■□□□□ 0.26
MRE11-210ENST00000541157 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
MRE11-210ENST00000541157 APLP2Q06481 763 aa16.6■□□□□ 0.25
MRE11-210ENST00000541157 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
MRE11-210ENST00000541157 KIF21AQ7Z4S6 1674 aa16.58■□□□□ 0.24
MRE11-210ENST00000541157 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
MRE11-210ENST00000541157 CAPN15O75808 1086 aa16.54■□□□□ 0.24
MRE11-210ENST00000541157 URB2Q14146 1524 aaKnown RBP16.52■□□□□ 0.24
MRE11-210ENST00000541157 TOPBP1Q92547 1522 aa16.52■□□□□ 0.24
MRE11-210ENST00000541157 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
MRE11-210ENST00000541157 SOGA1O94964 1423 aa16.49■□□□□ 0.23
MRE11-210ENST00000541157 EEA1Q15075 1411 aa16.49■□□□□ 0.23
MRE11-210ENST00000541157 MRC2Q9UBG0 1479 aa16.48■□□□□ 0.23
MRE11-210ENST00000541157 ERCC6Q03468 1493 aa16.44■□□□□ 0.22
MRE11-210ENST00000541157 ATXN8OSP0DMR3 200 aa16.44■□□□□ 0.22
MRE11-210ENST00000541157 FAM9AQ8IZU1 332 aaPredicted RBP16.44■□□□□ 0.22
MRE11-210ENST00000541157 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
MRE11-210ENST00000541157 ATF5Q9Y2D1 282 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms